FFCP PHASE1:Mm9::chr17:23966062..23966110,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=67673 | |EntrezGene=67673 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1364 | |||
|TSSclassifier=NA | |||
|UniProt=P62869 | |UniProt=P62869 | ||
|association_with_transcript=0bp_to_NM_026305,uc008atr.1,uc008ats.1_5end | |association_with_transcript=0bp_to_NM_026305,uc008atr.1,uc008ats.1_5end | ||
|cluster_id=chr17:23966062..23966110,- | |||
|description=CAGE_peak_1_at_Tceb2_5end | |description=CAGE_peak_1_at_Tceb2_5end | ||
|id=chr17:23966062..23966110,- | |id=chr17:23966062..23966110,- | ||
|ontology_enrichment_celltype=CL:0000055!2.39e-18!50;CL:0002319!1.72e-14!43;CL:0000221!3.46e-14!44;CL:0000133!3.46e-14!44;CL:0002321!2.17e-13!70;CL:0000220!2.17e-13!70;CL:0000393!4.23e-12!39;CL:0000211!4.23e-12!39;CL:0000117!8.38e-11!23;CL:0000337!8.38e-11!23;CL:0002371!5.96e-10!118;CL:0000540!5.48e-09!33;CL:0000047!5.48e-09!33;CL:0000031!5.48e-09!33;CL:0000404!5.48e-09!33;CL:0000548!5.98e-09!115;CL:0000004!5.98e-09!115;CL:0000255!5.98e-09!115;CL:0000144!1.84e-08!121;CL:0000012!1.84e-08!121;CL:0000333!3.59e-07!10;CL:0000095!3.59e-07!10;CL:0000243!3.59e-07!10;CL:0000123!3.59e-07!10;CL:0000125!3.59e-07!10;CL:0000030!3.59e-07!10;CL:0000339!3.59e-07!10;CL:0000723!9.09e-07!91;CL:0000048!9.09e-07!91 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,1.72e-14,43;CL:0000221,3.46e-14,44;CL:0000133,3.46e-14,44;CL:0002321,2.17e-13,70;CL:0000393,4.23e-12,39;CL:0000211,4.23e-12,39;CL:0000117,8.38e-11,23;CL:0000337,8.38e-11,23;CL:0000540,5.48e-09,33;CL:0000047,5.48e-09,33;CL:0000031,5.48e-09,33;CL:0000404,5.48e-09,33;CL:0000333,3.59e-07,10;CL:0000095,3.59e-07,10;CL:0000243,3.59e-07,10;CL:0000123,3.59e-07,10;CL:0000125,3.59e-07,10;CL:0000030,3.59e-07,10;CL:0000339,3.59e-07,10;CL:0000723,9.09e-07,91;CL:0000048,9.09e-07,91 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.35e-11!75;UBERON:0001016!2.35e-11!75;UBERON:0001017!1.53e-10!73;UBERON:0005743!1.53e-10!73;UBERON:0001049!6.16e-07!52;UBERON:0005068!6.16e-07!52;UBERON:0006241!6.16e-07!52;UBERON:0007135!6.16e-07!52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.35e-11,75;UBERON:0001017,1.53e-10,73;UBERON:0010314,6.77e-08,92;UBERON:0000073,1.58e-07,54;UBERON:0001049,6.16e-07,52;UBERON:0005068,6.16e-07,52;UBERON:0006241,6.16e-07,52;UBERON:0007135,6.16e-07,52 | |||
|phase1_expression=112.744788361775,148.314548246728,167.439720095349,121.288148734039,126.726619676426,91.1584446481562,103.023174502627,103.815152047027,36.32349031513,35.811872527265,103.24443483998,81.1282856982571,81.6627481771851,84.4481087367515,106.595123781012,110.551495994845,162.29835572573,88.3294063003065,73.9046797134932,92.5169440919706,135.388917920503,113.886721027415,136.085090141385,154.872665264018,172.974597924646,202.129651368487,184.366134356084,148.028736855206,197.434332815172,137.356420719162,195.788040908634,102.87496910046,145.770354657543,110.937176710807,125.361602972053,157.922913090568,132.097573501753,168.668247186974,257.05932834833,164.909979351746,168.23420557687,185.788371908697,179.638830621527,225.607097812234,228.604979900005,242.465259605581,428.750456702725,242.443973895057,270.433690946135,249.64799041138,215.999048567934,217.066372191107,91.7770855135818,63.8318684969983,74.612823409627,232.819789612532,228.367151631189,241.334539185843,242.779753031517,211.596391708813,232.616125086768,355.786758672589,304.13882027001,281.218661650437,276.882581518753,301.243568737146,341.544125990981,395.744854481201,165.903379693564,156.336876588098,194.971239172731,238.80422296158,215.567695968775,193.535462759627,182.010549463631,163.620944016584,142.049486489211,180.294521376285,189.243248971692,222.887826264028,215.27042539647,202.63530114658,269.411594036333,237.485821433369,187.025055278816,149.671321420623,168.995185108535,203.548194841228,188.255316626296,214.396516022951,81.7417858138731,177.247318658166,120.354926066272,139.783126634195,107.862885296313,94.0856462904405,138.197309409644,210.311018061323,227.832326036716,272.424811947472,122.111244946382,123.193418317745,68.7974147207943,42.6640021891999,282.737299560646,290.097045968988,286.126835878367,113.612960320465,66.288098213676,107.472108682933,137.226893472013,130.920155674221,155.665460647839,137.609770824544,93.4830221728853,118.000929258565,166.115018317499,105.557530551536,116.768592857383,121.972204860347,101.587098491781,92.1262980956922,119.290727179598,109.500018082319,117.290155815535,151.486033738695,110.469544794458,197.367998496831,108.390903693324,149.491058126013,129.472670597671,143.497270112891,134.713848149014,128.369159579826,160.204582355421,137.742832344526,113.958248148504,92.0611582514688,141.777467481292,70.4980217219688,126.216829673823,197.25600560392,144.589890233695,123.577950625286,90.3524708729634,103.259658549589,121.156329855729,80.7154516705729,139.472491427549,111.194375138678,117.535350941518,136.339745569952,94.5360647367033,117.709232284492,109.476096569026,114.444703420634,139.03821108802,145.401567519814,114.233726757028,145.609418092458,139.777531748733,165.477034482673,133.050541398888,150.131108823269,166.454214805481,157.890548485527,145.404183558594,130.893948793597,130.825080681217,148.407387527502,131.493609083378,153.217586821748,152.58733012728,144.54031300492,144.889774560684,133.158568418794,150.010127474644,157.876988298136,133.731733085592,104.506502337197,111.985823888899,97.4131423930744,116.081338887022,138.674481436056,119.106794447672,123.688914997732,120.138229806529,115.991623199991,103.136002086015,110.554787264469,139.409042169178,119.883046499129,168.804431848243,126.930097509409,105.945271532696,109.564414380779,110.746870172714,88.8620838010336,96.6254287258651,103.327103585722,126.854972095831,136.35386613359,121.842029732818,119.461095692723,120.097546014167,129.970300958445,143.62496594306,134.335677982096,156.08564714201,109.89992450621,65.3404963903393,129.867548437963,30.1913233707445,93.4073778647944,108.901147916982,111.892442930571,106.382666218494,104.207800614487,106.602590726131,179.258875534879,118.638502849795,121.36773632926,117.110433895963,110.889142426482,111.404423934654,101.469496886055,89.0638564199979,91.2434521352953,88.1784870675904,99.1373054030215,111.381813303503,89.6824163205372,93.4905960423488,156.644836939788,122.44930398174,79.469782935763,159.26618526789,142.294987522935,244.263068611246,167.893166590908,166.588339851784,161.251201394512,121.714219719031,134.778402045239,121.202478700822,114.929071500266,143.707799094587,126.546786475598,120.958060051636,132.384382365784,106.738944076618,122.865266530406,95.9404190592563,83.1449419781579,115.488270355768,146.882284873764,139.068836203785,162.200368590072,173.932814906775,131.274808172057,76.7532030709617,92.7011010167639,106.592716137032,109.980791761664,145.477679833498,108.292320410596,83.7481430154319,128.563621138356,155.747855274436,154.537002257778,106.226799951722,110.588666913284,117.981647771721,141.271736389174,135.640247260825,149.553442029857,127.685942473823,96.1286854648829,77.3414603873388,100.240081230595,98.004694426575,94.0527355539201,102.309773657078,150.194494628513,117.217424227327,97.2082148106778,105.190491545996,109.818810433735,87.8943884246192,119.879762760218,75.8103797772595,71.9350464943602,71.7257864044959,181.387417422872,132.2284453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| |phase1_expression=112.744788361775,148.314548246728,167.439720095349,121.288148734039,126.726619676426,91.1584446481562,103.023174502627,103.815152047027,36.32349031513,35.811872527265,103.24443483998,81.1282856982571,81.6627481771851,84.4481087367515,106.595123781012,110.551495994845,162.29835572573,88.3294063003065,73.9046797134932,92.5169440919706,135.388917920503,113.886721027415,136.085090141385,154.872665264018,172.974597924646,202.129651368487,184.366134356084,148.028736855206,197.434332815172,137.356420719162,195.788040908634,102.87496910046,145.770354657543,110.937176710807,125.361602972053,157.922913090568,132.097573501753,168.668247186974,257.05932834833,164.909979351746,168.23420557687,185.788371908697,179.638830621527,225.607097812234,228.604979900005,242.465259605581,428.750456702725,242.443973895057,270.433690946135,249.64799041138,215.999048567934,217.066372191107,91.7770855135818,63.8318684969983,74.612823409627,232.819789612532,228.367151631189,241.334539185843,242.779753031517,211.596391708813,232.616125086768,355.786758672589,304.13882027001,281.218661650437,276.882581518753,301.243568737146,341.544125990981,395.744854481201,165.903379693564,156.336876588098,194.971239172731,238.80422296158,215.567695968775,193.535462759627,182.010549463631,163.620944016584,142.049486489211,180.294521376285,189.243248971692,222.887826264028,215.27042539647,202.63530114658,269.411594036333,237.485821433369,187.025055278816,149.671321420623,168.995185108535,203.548194841228,188.255316626296,214.396516022951,81.7417858138731,177.247318658166,120.354926066272,139.783126634195,107.862885296313,94.0856462904405,138.197309409644,210.311018061323,227.832326036716,272.424811947472,122.111244946382,123.193418317745,68.7974147207943,42.6640021891999,282.737299560646,290.097045968988,286.126835878367,113.612960320465,66.288098213676,107.472108682933,137.226893472013,130.920155674221,155.665460647839,137.609770824544,93.4830221728853,118.000929258565,166.115018317499,105.557530551536,116.768592857383,121.972204860347,101.587098491781,92.1262980956922,119.290727179598,109.500018082319,117.290155815535,151.486033738695,110.469544794458,197.367998496831,108.390903693324,149.491058126013,129.472670597671,143.497270112891,134.713848149014,128.369159579826,160.204582355421,137.742832344526,113.958248148504,92.0611582514688,141.777467481292,70.4980217219688,126.216829673823,197.25600560392,144.589890233695,123.577950625286,90.3524708729634,103.259658549589,121.156329855729,80.7154516705729,139.472491427549,111.194375138678,117.535350941518,136.339745569952,94.5360647367033,117.709232284492,109.476096569026,114.444703420634,139.03821108802,145.401567519814,114.233726757028,145.609418092458,139.777531748733,165.477034482673,133.050541398888,150.131108823269,166.454214805481,157.890548485527,145.404183558594,130.893948793597,130.825080681217,148.407387527502,131.493609083378,153.217586821748,152.58733012728,144.54031300492,144.889774560684,133.158568418794,150.010127474644,157.876988298136,133.731733085592,104.506502337197,111.985823888899,97.4131423930744,116.081338887022,138.674481436056,119.106794447672,123.688914997732,120.138229806529,115.991623199991,103.136002086015,110.554787264469,139.409042169178,119.883046499129,168.804431848243,126.930097509409,105.945271532696,109.564414380779,110.746870172714,88.8620838010336,96.6254287258651,103.327103585722,126.854972095831,136.35386613359,121.842029732818,119.461095692723,120.097546014167,129.970300958445,143.62496594306,134.335677982096,156.08564714201,109.89992450621,65.3404963903393,129.867548437963,30.1913233707445,93.4073778647944,108.901147916982,111.892442930571,106.382666218494,104.207800614487,106.602590726131,179.258875534879,118.638502849795,121.36773632926,117.110433895963,110.889142426482,111.404423934654,101.469496886055,89.0638564199979,91.2434521352953,88.1784870675904,99.1373054030215,111.381813303503,89.6824163205372,93.4905960423488,156.644836939788,122.44930398174,79.469782935763,159.26618526789,142.294987522935,244.263068611246,167.893166590908,166.588339851784,161.251201394512,121.714219719031,134.778402045239,121.202478700822,114.929071500266,143.707799094587,126.546786475598,120.958060051636,132.384382365784,106.738944076618,122.865266530406,95.9404190592563,83.1449419781579,115.488270355768,146.882284873764,139.068836203785,162.200368590072,173.932814906775,131.274808172057,76.7532030709617,92.7011010167639,106.592716137032,109.980791761664,145.477679833498,108.292320410596,83.7481430154319,128.563621138356,155.747855274436,154.537002257778,106.226799951722,110.588666913284,117.981647771721,141.271736389174,135.640247260825,149.553442029857,127.685942473823,96.1286854648829,77.3414603873388,100.240081230595,98.004694426575,94.0527355539201,102.309773657078,150.194494628513,117.217424227327,97.2082148106778,105.190491545996,109.818810433735,87.8943884246192,119.879762760218,75.8103797772595,71.9350464943602,71.7257864044959,181.387417422872,132.2284453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| ||
|short_description=p1@Tceb2 | |short_description=p1@Tceb2 | ||
}} | }} |
Latest revision as of 01:10, 26 September 2015
Short description: | p1@Tceb2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Tceb2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1364 |
Association with transcript: | 0bp_to_NM_026305, uc008atr.1, uc008ats.1_5end |
EntrezGene: | Tceb2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 1.72e-14 | 43 |
ectodermal cell | 3.46e-14 | 44 |
neurectodermal cell | 3.46e-14 | 44 |
embryonic cell | 2.17e-13 | 70 |
electrically responsive cell | 4.23e-12 | 39 |
electrically active cell | 4.23e-12 | 39 |
CNS neuron (sensu Vertebrata) | 8.38e-11 | 23 |
neuroblast (sensu Vertebrata) | 8.38e-11 | 23 |
neuron | 5.48e-09 | 33 |
neuronal stem cell | 5.48e-09 | 33 |
neuroblast | 5.48e-09 | 33 |
electrically signaling cell | 5.48e-09 | 33 |
migratory neural crest cell | 3.59e-07 | 10 |
neuron associated cell | 3.59e-07 | 10 |
glial cell (sensu Vertebrata) | 3.59e-07 | 10 |
neuron associated cell (sensu Vertebrata) | 3.59e-07 | 10 |
glial cell | 3.59e-07 | 10 |
glioblast | 3.59e-07 | 10 |
glioblast (sensu Vertebrata) | 3.59e-07 | 10 |
somatic stem cell | 9.09e-07 | 91 |
multi fate stem cell | 9.09e-07 | 91 |
Ontology term | p-value | n |
---|---|---|
nervous system | 2.35e-11 | 75 |
central nervous system | 1.53e-10 | 73 |
structure with developmental contribution from neural crest | 6.77e-08 | 92 |
regional part of nervous system | 1.58e-07 | 54 |
neural tube | 6.16e-07 | 52 |
neural rod | 6.16e-07 | 52 |
future spinal cord | 6.16e-07 | 52 |
neural keel | 6.16e-07 | 52 |