FFCP PHASE1:Mm9::chr10:42894395..42894421,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=109205 | |EntrezGene=109205 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=13 | |MCL_coexpression_id=13 | ||
|TSSclassifier=NA | |||
|UniProt=Q0P5V2 | |UniProt=Q0P5V2 | ||
|association_with_transcript=-59bp_to_ENSMUST00000040275,NM_175407,uc007ezf.1,uc007ezg.1_5end | |association_with_transcript=-59bp_to_ENSMUST00000040275,NM_175407,uc007ezf.1,uc007ezg.1_5end | ||
|cluster_id=chr10:42894395..42894421,- | |||
|description=CAGE_peak_2_at_Sobp_5end | |description=CAGE_peak_2_at_Sobp_5end | ||
|id=chr10:42894395..42894421,- | |id=chr10:42894395..42894421,- | ||
|ontology_enrichment_celltype=CL:0000117!2.43e-13!23;CL:0000337!2.43e-13!23;CL:0000540!1.47e-10!33;CL:0000047!1.47e-10!33;CL:0000031!1.47e-10!33;CL:0000404!1.47e-10!33;CL:0000221!5.12e-10!44;CL:0000133!5.12e-10!44;CL:0002319!7.62e-10!43;CL:0000393!5.69e-09!39;CL:0000211!5.69e-09!39;CL:0000055!4.93e-08!50 | |ontology_enrichment_celltype=CL:0000117!2.43e-13!23;CL:0000337!2.43e-13!23;CL:0000540!1.47e-10!33;CL:0000047!1.47e-10!33;CL:0000031!1.47e-10!33;CL:0000404!1.47e-10!33;CL:0000221!5.12e-10!44;CL:0000133!5.12e-10!44;CL:0002319!7.62e-10!43;CL:0000393!5.69e-09!39;CL:0000211!5.69e-09!39;CL:0000055!4.93e-08!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.17e-14,23;CL:0000337,4.17e-14,23;CL:0000540,2.01e-10,33;CL:0000047,2.01e-10,33;CL:0000031,2.01e-10,33;CL:0000404,2.01e-10,33;CL:0000221,1.79e-09,44;CL:0000133,1.79e-09,44;CL:0002319,2.73e-09,43;CL:0000393,2.78e-08,39;CL:0000211,2.78e-08,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!5.34e-26!73;UBERON:0005743!5.34e-26!73;UBERON:0000073!5.97e-25!75;UBERON:0001016!5.97e-25!75;UBERON:0001049!5.07e-24!52;UBERON:0005068!5.07e-24!52;UBERON:0006241!5.07e-24!52;UBERON:0007135!5.07e-24!52;UBERON:0000955!4.25e-23!50;UBERON:0006238!4.25e-23!50;UBERON:0000033!9.21e-23!63;UBERON:0002616!1.91e-22!49;UBERON:0004121!9.44e-22!102;UBERON:0000924!9.44e-22!102;UBERON:0006601!9.44e-22!102;UBERON:0002346!1.68e-21!71;UBERON:0003075!1.68e-21!71;UBERON:0007284!1.68e-21!71;UBERON:0003080!3.41e-18!40;UBERON:0002020!4.37e-18!34;UBERON:0003056!9.79e-18!49;UBERON:0002780!1.23e-17!39;UBERON:0001890!1.23e-17!39;UBERON:0006240!1.23e-17!39;UBERON:0002791!1.85e-15!29;UBERON:0003528!1.85e-15!29;UBERON:0001893!1.85e-15!29;UBERON:0000153!5.35e-13!94;UBERON:0007811!4.13e-12!86;UBERON:0000956!7.54e-12!21;UBERON:0001869!7.54e-12!21;UBERON:0000203!7.54e-12!21;UBERON:0002619!3.39e-09!17;UBERON:0000025!9.56e-08!114;UBERON:0004111!2.23e-07!122;UBERON:0000468!2.46e-07!333;UBERON:0002021!3.97e-07!10;UBERON:0000411!3.97e-07!10;UBERON:0001950!3.97e-07!10;UBERON:0000479!7.56e-07!349 | |ontology_enrichment_uberon=UBERON:0001017!5.34e-26!73;UBERON:0005743!5.34e-26!73;UBERON:0000073!5.97e-25!75;UBERON:0001016!5.97e-25!75;UBERON:0001049!5.07e-24!52;UBERON:0005068!5.07e-24!52;UBERON:0006241!5.07e-24!52;UBERON:0007135!5.07e-24!52;UBERON:0000955!4.25e-23!50;UBERON:0006238!4.25e-23!50;UBERON:0000033!9.21e-23!63;UBERON:0002616!1.91e-22!49;UBERON:0004121!9.44e-22!102;UBERON:0000924!9.44e-22!102;UBERON:0006601!9.44e-22!102;UBERON:0002346!1.68e-21!71;UBERON:0003075!1.68e-21!71;UBERON:0007284!1.68e-21!71;UBERON:0003080!3.41e-18!40;UBERON:0002020!4.37e-18!34;UBERON:0003056!9.79e-18!49;UBERON:0002780!1.23e-17!39;UBERON:0001890!1.23e-17!39;UBERON:0006240!1.23e-17!39;UBERON:0002791!1.85e-15!29;UBERON:0003528!1.85e-15!29;UBERON:0001893!1.85e-15!29;UBERON:0000153!5.35e-13!94;UBERON:0007811!4.13e-12!86;UBERON:0000956!7.54e-12!21;UBERON:0001869!7.54e-12!21;UBERON:0000203!7.54e-12!21;UBERON:0002619!3.39e-09!17;UBERON:0000025!9.56e-08!114;UBERON:0004111!2.23e-07!122;UBERON:0000468!2.46e-07!333;UBERON:0002021!3.97e-07!10;UBERON:0000411!3.97e-07!10;UBERON:0001950!3.97e-07!10;UBERON:0000479!7.56e-07!349 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.51e-27,54;UBERON:0001017,9.66e-27,73;UBERON:0010314,1.07e-25,92;UBERON:0001049,1.75e-25,52;UBERON:0005068,1.75e-25,52;UBERON:0006241,1.75e-25,52;UBERON:0007135,1.75e-25,52;UBERON:0001016,5.30e-25,75;UBERON:0002346,2.90e-24,64;UBERON:0003075,2.90e-24,64;UBERON:0007284,2.90e-24,64;UBERON:0000955,1.02e-22,47;UBERON:0006238,1.02e-22,47;UBERON:0002616,4.92e-22,46;UBERON:0004121,1.09e-21,95;UBERON:0000924,1.09e-21,95;UBERON:0006601,1.09e-21,95;UBERON:0010371,2.22e-21,73;UBERON:0003080,2.83e-19,40;UBERON:0002020,3.68e-19,34;UBERON:0003056,8.69e-19,49;UBERON:0002780,1.11e-18,39;UBERON:0001890,1.11e-18,39;UBERON:0006240,1.11e-18,39;UBERON:0003528,2.32e-16,29;UBERON:0002791,2.32e-16,29;UBERON:0001893,2.32e-16,29;UBERON:0000956,1.62e-12,21;UBERON:0001869,1.62e-12,21;UBERON:0000203,1.62e-12,21;UBERON:0002619,1.08e-09,17;UBERON:0002021,1.72e-07,10;UBERON:0000411,1.72e-07,10;UBERON:0001950,1.72e-07,10;UBERON:0000025,2.01e-07,114;UBERON:0004111,7.77e-07,122;UBERON:0003076,9.15e-07,12;UBERON:0003057,9.15e-07,12 | |||
|phase1_expression=4.64431656603902,0,0.454999239389536,0,0,0,0,0,0,0,0,0.0797721589953364,0,0,0,0,0,0,0,0,3.31668831589172,0.595745707205312,2.61199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0.629484089877886,0.608261587317087,0.367093504323363,8.60630478782843,2.18025156380447,3.07560655828261,1.55543919259427,2.51975558925653,1.43752564364972,0,0,0,1.80081605225163,5.73066879877513,1.03134418455488,12.7459370341547,16.9277113367051,12.6766280701236,2.37191172448392,1.77858959222228,0,0,0,2.39680088414724,5.76327457982332,14.6202353354953,13.095576018174,14.7227472945967,7.7125765789027,7.73039893330647,10.656699531701,7.57179221044067,7.35375029288017,7.70811166995721,9.95961237064464,8.44835932909339,17.672762555846,12.8082701043374,19.2737947106001,6.42120897703176,3.37657566019008,6.57032465440283,10.0173719061047,7.11858403995515,12.3023634244698,0.605809546665472,0.831287161174641,0.579728977403356,0,0,0,0,0,2.10666630197628,1.53387290320252,0.259786004602869,0.70667914902068,4.08445917352373,1.28326477414318,10.1922095882658,7.11066703153331,0,0,0,0.91347103775248,0.776813650941515,1.92974780784272,1.56136794089522,1.21786191324856,1.61430848079241,1.95939432718409,1.88141931417128,2.51333182659351,0,1.87979163995885,1.76922110389975,5.98537344805414,2.65009822152472,2.90925151881133,0,14.0534782565543,11.9384622883669,0.255457055208591,0,0,0.127070227073065,9.73639156131348,4.11750542536764,14.9528679014309,14.6012428961512,13.0414883238469,8.3115217823824,8.76102820565891,1.62942982160506,2.36373244159177,0.505445516867349,1.47309299120532,2.73252930221678,1.60931473103431,2.70093194708024,3.16480117455002,4.76255494059295,3.33095672740609,3.37326208415024,3.3631438196072,3.44908788692548,2.64748512234947,6.51019159406611,3.5071317188412,2.78047249225598,3.83077383174383,3.2925141825271,2.7864797354589,0,0,0,2.89976081549703,1.64168241986767,2.52086886045421,2.60419209143731,3.34499193970586,2.77680803197281,3.95307706075693,3.75582761959467,3.26942958628075,4.60767579757745,3.61168420974009,5.10733500138891,3.36259971078264,4.61055242111206,3.48936688776967,13.24826675954,14.3037411207205,0,0.264450566663544,0.426576501070468,1.85789337488351,1.80414445850931,1.61346819698674,0.444756087689741,1.14135375667535,0.949058123089023,0.823494773620054,1.50801125280162,0.795825888164603,0.779856348476481,0.898819408654221,0.648414149624083,0.199141273254367,2.46568271239006,2.51346727741403,2.25415471346161,1.62921062276251,1.35766741017338,2.24434623649019,1.64414996523069,0.295220295959204,0.31399745568275,0.246794327843601,0,0.166845105716094,0,0,0,0,0,0.287696137450811,0.162135226775035,0.274561413188081,4.31304619582064,0,0.624075346229121,0.252578877947112,0.358794827043824,0,0.369506380333209,1.51593129416388,1.46668478797823,1.18821560042632,0.234690248288502,0.837531287209079,0.476087281772027,1.17080188714679,0.472905432318573,0.8858587585951,0.478364305972461,0.327726629431476,0.172684981865896,1.01254341007058,0,0,0,0.827810238914197,8.18808008937739,6.56385444916338,0,4.54447668967871,1.57754109708128,2.34263246577983,1.50796378412959,0.238968797952552,0.668396022247182,0.849229592366497,2.83367491172426,2.04579100537918,5.13874111330481,12.2102100240287,5.67760340833074,1.06839362200353,3.58351310577867,4.94910368917606,0,1.45668381692989,1.209294227859,0.754420319023592,1.18120757152309,1.53717573971964,1.55056975900933,0.363533729477506,1.06949213515416,0.948110273807448,1.05418608574999,0,6.46835250932197,2.52085531643834,2.32845630808958,3.21505552547388,6.20690817747958,5.88617098086833,4.27827453565514,5.48036908406279,0.938686832254841,0.21183207086382,0.220528398054962,4.28704257647848,2.58343082713449,1.56813604813205,0.716234064018819,0.984845398470368,0.291480836629851,6.30446026835733,0,0.82554747185289,0.185194527369712,0,0,0.228778173206523,0,0,0.138199973804424,0,1.26534397432454,2.23651413839534,2.37611749807963,0.418176592028937,0.87345025498471,1.61837215661785,2.31429676030941,1.30877970992015,0.648074866458964,0.621339313086926,2.25477175473676,5.38259565758324,1.48912641411388,3.30567020184881,2.84151611651008,3.8859908862879,6.80671984145373,8.33308063001281,8.49360689848258,4.34851417486811,2.88030006257865,0,1.82452693761148,1.23253148597793,0.51968329191118,1.07416017400489,0.198681354781265,0.240390899039938,0.147689527174577,0.302899349844443,0.381034033274999,0.201652370273681,0.38983152295901,0.192423683280659,0.233753804363138,4.30787728868902,0,0.0897138566094757,0,1.73870634628971,3.00291960721891,2.38097111547445,0.857473516316263,0,12.4245405375755,11.9684561491866,10.3121192419091,12.0297227640581,12.3314853558716,12.8416962556249,10.8003600037089,8.10578165803597,11.3285602246051,13.4617681055473,3.73634451303036,5.58634822761443,2.73173769206615,5.34834777550247,4.82110274044359,4.59608771125035,4.00044110042907,4.32673620201678,6.73930340142812,5.55933865880354,4.81610669791456,5.47016390019621,5.61849044819294,6.14641463086745,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| ||
|short_description=p2@Sobp | |short_description=p2@Sobp | ||
}} | }} |
Latest revision as of 00:50, 26 September 2015
Short description: | p2@Sobp |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Sobp_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | -59bp_to_ENSMUST00000040275, NM_175407, uc007ezf.1, uc007ezg.1_5end |
EntrezGene: | Sobp |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.17e-14 | 23 |
neuroblast (sensu Vertebrata) | 4.17e-14 | 23 |
neuron | 2.01e-10 | 33 |
neuronal stem cell | 2.01e-10 | 33 |
neuroblast | 2.01e-10 | 33 |
electrically signaling cell | 2.01e-10 | 33 |
ectodermal cell | 1.79e-09 | 44 |
neurectodermal cell | 1.79e-09 | 44 |
neural cell | 2.73e-09 | 43 |
electrically responsive cell | 2.78e-08 | 39 |
electrically active cell | 2.78e-08 | 39 |