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FFCP PHASE1:Mm9::chr10:42894383..42894386,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=109205
|EntrezGene=109205
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q0P5V2
|UniProt=Q0P5V2
|association_with_transcript=-47bp_to_ENSMUST00000040275,NM_175407,uc007ezf.1,uc007ezg.1_5end
|association_with_transcript=-47bp_to_ENSMUST00000040275,NM_175407,uc007ezf.1,uc007ezg.1_5end
|cluster_id=chr10:42894383..42894386,-
|description=CAGE_peak_5_at_Sobp_5end
|description=CAGE_peak_5_at_Sobp_5end
|id=chr10:42894383..42894386,-
|id=chr10:42894383..42894386,-
|ontology_enrichment_celltype=CL:0000117!3.42e-12!23;CL:0000337!3.42e-12!23;CL:0000540!1.82e-08!33;CL:0000047!1.82e-08!33;CL:0000031!1.82e-08!33;CL:0000404!1.82e-08!33;CL:0000393!4.89e-07!39;CL:0000211!4.89e-07!39
|ontology_enrichment_celltype=CL:0000117!3.42e-12!23;CL:0000337!3.42e-12!23;CL:0000540!1.82e-08!33;CL:0000047!1.82e-08!33;CL:0000031!1.82e-08!33;CL:0000404!1.82e-08!33;CL:0000393!4.89e-07!39;CL:0000211!4.89e-07!39
|ontology_enrichment_celltype_v019_2=CL:0000117,7.54e-12,23;CL:0000337,7.54e-12,23;CL:0002608,8.56e-10,3;CL:0002609,1.97e-08,6;CL:0000540,1.07e-07,33;CL:0000047,1.07e-07,33;CL:0000031,1.07e-07,33;CL:0000404,1.07e-07,33
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!7.40e-23!63;UBERON:0001049!1.43e-21!52;UBERON:0005068!1.43e-21!52;UBERON:0006241!1.43e-21!52;UBERON:0007135!1.43e-21!52;UBERON:0002346!1.99e-21!71;UBERON:0003075!1.99e-21!71;UBERON:0007284!1.99e-21!71;UBERON:0000955!3.69e-21!50;UBERON:0006238!3.69e-21!50;UBERON:0002616!2.31e-20!49;UBERON:0004121!4.95e-20!102;UBERON:0000924!4.95e-20!102;UBERON:0006601!4.95e-20!102;UBERON:0001017!5.49e-20!73;UBERON:0005743!5.49e-20!73;UBERON:0000073!3.69e-19!75;UBERON:0001016!3.69e-19!75;UBERON:0003056!5.61e-19!49;UBERON:0002020!6.85e-18!34;UBERON:0003080!1.15e-17!40;UBERON:0002780!4.29e-17!39;UBERON:0001890!4.29e-17!39;UBERON:0006240!4.29e-17!39;UBERON:0002791!1.52e-15!29;UBERON:0003528!1.52e-15!29;UBERON:0001893!1.52e-15!29;UBERON:0000956!3.15e-11!21;UBERON:0001869!3.15e-11!21;UBERON:0000203!3.15e-11!21;UBERON:0000153!4.84e-11!94;UBERON:0007811!9.41e-11!86;UBERON:0002619!7.34e-09!17;UBERON:0002021!4.23e-07!10;UBERON:0000411!4.23e-07!10;UBERON:0001950!4.23e-07!10
|ontology_enrichment_uberon=UBERON:0000033!7.40e-23!63;UBERON:0001049!1.43e-21!52;UBERON:0005068!1.43e-21!52;UBERON:0006241!1.43e-21!52;UBERON:0007135!1.43e-21!52;UBERON:0002346!1.99e-21!71;UBERON:0003075!1.99e-21!71;UBERON:0007284!1.99e-21!71;UBERON:0000955!3.69e-21!50;UBERON:0006238!3.69e-21!50;UBERON:0002616!2.31e-20!49;UBERON:0004121!4.95e-20!102;UBERON:0000924!4.95e-20!102;UBERON:0006601!4.95e-20!102;UBERON:0001017!5.49e-20!73;UBERON:0005743!5.49e-20!73;UBERON:0000073!3.69e-19!75;UBERON:0001016!3.69e-19!75;UBERON:0003056!5.61e-19!49;UBERON:0002020!6.85e-18!34;UBERON:0003080!1.15e-17!40;UBERON:0002780!4.29e-17!39;UBERON:0001890!4.29e-17!39;UBERON:0006240!4.29e-17!39;UBERON:0002791!1.52e-15!29;UBERON:0003528!1.52e-15!29;UBERON:0001893!1.52e-15!29;UBERON:0000956!3.15e-11!21;UBERON:0001869!3.15e-11!21;UBERON:0000203!3.15e-11!21;UBERON:0000153!4.84e-11!94;UBERON:0007811!9.41e-11!86;UBERON:0002619!7.34e-09!17;UBERON:0002021!4.23e-07!10;UBERON:0000411!4.23e-07!10;UBERON:0001950!4.23e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0003528,2.96e-18,29;UBERON:0002791,2.96e-18,29;UBERON:0001893,2.96e-18,29;UBERON:0002020,1.32e-17,34;UBERON:0000956,5.82e-16,21;UBERON:0001869,5.82e-16,21;UBERON:0000203,5.82e-16,21;UBERON:0000955,1.53e-15,47;UBERON:0006238,1.53e-15,47;UBERON:0002780,9.92e-15,39;UBERON:0001890,9.92e-15,39;UBERON:0006240,9.92e-15,39;UBERON:0000073,1.02e-14,54;UBERON:0001017,1.92e-14,73;UBERON:0003080,2.78e-14,40;UBERON:0001016,6.11e-14,75;UBERON:0002616,7.76e-14,46;UBERON:0001049,1.24e-13,52;UBERON:0005068,1.24e-13,52;UBERON:0006241,1.24e-13,52;UBERON:0007135,1.24e-13,52;UBERON:0002619,1.94e-13,17;UBERON:0003056,4.43e-11,49;UBERON:0002346,2.11e-10,64;UBERON:0003075,2.11e-10,64;UBERON:0007284,2.11e-10,64;UBERON:0004121,4.46e-10,95;UBERON:0000924,4.46e-10,95;UBERON:0006601,4.46e-10,95;UBERON:0010371,1.11e-08,73;UBERON:0002021,6.39e-08,10;UBERON:0000411,6.39e-08,10;UBERON:0001950,6.39e-08,10;UBERON:0010314,4.54e-07,92;UBERON:0001954,5.50e-07,7;UBERON:0003022,5.50e-07,7;UBERON:0002421,5.50e-07,7;UBERON:0000349,5.50e-07,7;UBERON:0002600,5.50e-07,7
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0.218025156380447,0,0.194429899074283,0.279972843250725,0,0,0,0,0,0.286533439938757,0.515672092277442,1.21389876515759,2.11596391708813,0,0,0.889294796111139,0,0,0,0,0.384218305321555,0.933206510776299,1.62007125998029,0.630974884054146,1.71390590642282,0.441737081903227,1.5923803897944,1.0543001812006,1.83843757322004,1.10115880999389,0.893811366596314,0.614426133024974,2.37395317914349,2.10421580285542,0.52091337055676,0.558365998002762,0.56276261003168,0.916789486660861,0.883885756421003,0.569486723196412,0.745597783301202,0,0.151143120213571,0,0,0,0,0,0,0.421333260395256,0,0.259786004602869,0,0.281686839553361,0,0,0,0,0,0,0,0,0.593768556259299,0.346970653532272,0,0,0.150722640552623,0,0.628332956648377,0,0.144599356919912,0,0.808834249737046,0.220841518460394,0.484875253135222,0,0.878342391034642,1.25668024088073,0,0,0,0,0.898743836428936,0.915001205637253,1.00523481690292,1.39059456153821,1.02286182932132,0.20778804455956,0.486723789203273,0,0,0,0.420883711772948,0.520481771850815,0.459804208866946,0.540186389416048,0.452114453507145,0.340182495756639,0.2562274405697,0.281105173679186,0.258703370739016,0.862271971731369,0.189106080167819,0.527853372491847,0,0.556094498451196,0,0.823128545631774,0.199034266818493,0,0,0,0,0.469052119962192,0,0.473489471170421,0.196764231747404,0.462801338662135,0,0.268273401399619,0.467061369468678,0.493679549740441,0.492502392237286,1.05389452409612,0.292399974850665,0.439100230582101,0.134206418760372,1.05144974282064,0.92614151141356,0,0,0,0.232236671860439,0.128867461322093,0.201683524623343,0,0,0,0.164698954724011,0.251335208800269,0.596869416123452,0,0,0,0,0.379335801906163,0.228497025219458,0,0.407302655690628,0,0.0701358198903186,0.0632365371242573,0,0.31399745568275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0,0,0.162964976442026,0,0,0,0,0,0.315270288212382,0,0.159454768657487,0,0.172684981865896,0,0,0,0,0.551873492609465,0.481651769963376,0.820481806145422,0,0.252470927204373,0.315508219416257,0,0.646270193198397,0,0.222798674082394,0,0,0,0.395287777946524,2.57057053137446,1.41940085208269,0.35613120733451,0,1.15479086080775,0,0,0,0.188605079755898,0,0.307435147943927,0,0,0.356497378384721,0.316036757935816,0,0,1.02131881726136,0.36012218806262,0.129358683782755,0.428674070063185,0.532020700926821,0.356737635204141,0.329098041204242,0.913394847343798,0,0.21183207086382,0,0.32977250588296,0.322928853391811,0.180938774784468,0,0.328281799490123,0.291480836629851,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0,0.209088296014469,0.218362563746178,0.269728692769641,0.165306911450672,0,0,0.621339313086926,0,0.299033092087958,0.496375471371293,0.194451188344048,0.387479470433193,0.337912250981556,0.352071715937262,0.2604087696879,1.15345278868282,0.483168241652012,0.288030006257865,0,0.202725215290164,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0.226730383615211,0,0.0897138566094757,0,0.19318959403219,0,0.183151624267265,0.214368379079066,0,1.12950368523413,0.920650473014354,1.71868654031819,0.515559547031063,2.74033007908257,3.0215755895588,0.675022500231806,1.80128481289688,0.906284817968409,0.51776031175182,0.415149390336707,1.59609949360412,1.36586884603307,1.21553358534147,0.628839487883947,0.735374033800057,0.222246727801615,0.206035057238894,0.320919209591815,0.505394423527595,0.25347929989024,0.188626341386076,0.280924522409647,0.704276676453562,0.804096565378586,0.476293691283074,1.0429589335037,0.192909220463705,0,0.147198920134397,0,0.70990322463735,0.238436189947321,0.436039249896986,0.376437521661322,0.507687647350059,0.365855945745545,0,0.814824683075171,0,0.711810108745045,0.492522411877817,0.409231043169689,0.464810523557898,0.578719832943424,0.499621155875892,0.467863216890817,0.429742108096597,0.57386499620653,0.441182838239031,0.463735671240843
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0.218025156380447,0,0.194429899074283,0.279972843250725,0,0,0,0,0,0.286533439938757,0.515672092277442,1.21389876515759,2.11596391708813,0,0,0.889294796111139,0,0,0,0,0.384218305321555,0.933206510776299,1.62007125998029,0.630974884054146,1.71390590642282,0.441737081903227,1.5923803897944,1.0543001812006,1.83843757322004,1.10115880999389,0.893811366596314,0.614426133024974,2.37395317914349,2.10421580285542,0.52091337055676,0.558365998002762,0.56276261003168,0.916789486660861,0.883885756421003,0.569486723196412,0.745597783301202,0,0.151143120213571,0,0,0,0,0,0,0.421333260395256,0,0.259786004602869,0,0.281686839553361,0,0,0,0,0,0,0,0,0.593768556259299,0.346970653532272,0,0,0.150722640552623,0,0.628332956648377,0,0.144599356919912,0,0.808834249737046,0.220841518460394,0.484875253135222,0,0.878342391034642,1.25668024088073,0,0,0,0,0.898743836428936,0.915001205637253,1.00523481690292,1.39059456153821,1.02286182932132,0.20778804455956,0.486723789203273,0,0,0,0.420883711772948,0.520481771850815,0.459804208866946,0.540186389416048,0.452114453507145,0.340182495756639,0.2562274405697,0.281105173679186,0.258703370739016,0.862271971731369,0.189106080167819,0.527853372491847,0,0.556094498451196,0,0.823128545631774,0.199034266818493,0,0,0,0,0.469052119962192,0,0.473489471170421,0.196764231747404,0.462801338662135,0,0.268273401399619,0.467061369468678,0.493679549740441,0.492502392237286,1.05389452409612,0.292399974850665,0.439100230582101,0.134206418760372,1.05144974282064,0.92614151141356,0,0,0,0.232236671860439,0.128867461322093,0.201683524623343,0,0,0,0.164698954724011,0.251335208800269,0.596869416123452,0,0,0,0,0.379335801906163,0.228497025219458,0,0.407302655690628,0,0.0701358198903186,0.0632365371242573,0,0.31399745568275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0,0,0.162964976442026,0,0,0,0,0,0.315270288212382,0,0.159454768657487,0,0.172684981865896,0,0,0,0,0.551873492609465,0.481651769963376,0.820481806145422,0,0.252470927204373,0.315508219416257,0,0.646270193198397,0,0.222798674082394,0,0,0,0.395287777946524,2.57057053137446,1.41940085208269,0.35613120733451,0,1.15479086080775,0,0,0,0.188605079755898,0,0.307435147943927,0,0,0.356497378384721,0.316036757935816,0,0,1.02131881726136,0.36012218806262,0.129358683782755,0.428674070063185,0.532020700926821,0.356737635204141,0.329098041204242,0.913394847343798,0,0.21183207086382,0,0.32977250588296,0.322928853391811,0.180938774784468,0,0.328281799490123,0.291480836629851,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0,0.209088296014469,0.218362563746178,0.269728692769641,0.165306911450672,0,0,0.621339313086926,0,0.299033092087958,0.496375471371293,0.194451188344048,0.387479470433193,0.337912250981556,0.352071715937262,0.2604087696879,1.15345278868282,0.483168241652012,0.288030006257865,0,0.202725215290164,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0.226730383615211,0,0.0897138566094757,0,0.19318959403219,0,0.183151624267265,0.214368379079066,0,1.12950368523413,0.920650473014354,1.71868654031819,0.515559547031063,2.74033007908257,3.0215755895588,0.675022500231806,1.80128481289688,0.906284817968409,0.51776031175182,0.415149390336707,1.59609949360412,1.36586884603307,1.21553358534147,0.628839487883947,0.735374033800057,0.222246727801615,0.206035057238894,0.320919209591815,0.505394423527595,0.25347929989024,0.188626341386076,0.280924522409647,0.704276676453562,0.804096565378586,0.476293691283074,1.0429589335037,0.192909220463705,0,0.147198920134397,0,0.70990322463735,0.238436189947321,0.436039249896986,0.376437521661322,0.507687647350059,0.365855945745545,0,0.814824683075171,0,0.711810108745045,0.492522411877817,0.409231043169689,0.464810523557898,0.578719832943424,0.499621155875892,0.467863216890817,0.429742108096597,0.57386499620653,0.441182838239031,0.463735671240843
|short_description=p5@Sobp
|short_description=p5@Sobp
}}
}}

Latest revision as of 00:50, 26 September 2015

Short description:p5@Sobp
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Sobp_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: -47bp_to_ENSMUST00000040275, NM_175407, uc007ezf.1, uc007ezg.1_5end
EntrezGene:Sobp
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Sobp

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.51
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C31.21
Mouse Granule cells, donor2.CNhs12357.11731-123E32.12
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.93
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.62
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.59
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.05
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.89
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.61
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.37
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.10
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.92
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.88
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.57
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.75
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.59
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.63
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.81
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.88
cerebellum, neonate N30.CNhs11135.1395-42I21.26
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.90
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F11.01
cortex, adult.CNhs10473.12-14D51.39
cortex, neonate N30.CNhs11107.1392-42F21.02
diencephalon, adult.CNhs10482.20-12F20.21
diencephalon, neonate N30.CNhs11201.1388-42B20.49
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.52
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C60.34
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G80.28
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.86
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.82
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.47
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G11.05
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E81.05
hippocampus, neonate N00.CNhs11228.627-43G10.93
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C20.48
medulla oblongata, neonate N30.CNhs11200.1396-42A30.82
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I92.57
ovary, adult.CNhs10507.91-2I71.42
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G61.15
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.18
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C90.56
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D91.15
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.52
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.74
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.80
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.42
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H21.37
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.80
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.04
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.49
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)7.54e-1223
neuroblast (sensu Vertebrata)7.54e-1223
hippocampal neuron8.56e-103
neuron of cerebral cortex1.97e-086
neuron1.07e-0733
neuronal stem cell1.07e-0733
neuroblast1.07e-0733
electrically signaling cell1.07e-0733

Uber anatomy
Ontology termp-valuen
brain grey matter2.96e-1829
regional part of telencephalon2.96e-1829
telencephalon2.96e-1829
gray matter1.32e-1734
cerebral cortex5.82e-1621
cerebral hemisphere5.82e-1621
pallium5.82e-1621
brain1.53e-1547
future brain1.53e-1547
regional part of forebrain9.92e-1539
forebrain9.92e-1539
future forebrain9.92e-1539
regional part of nervous system1.02e-1454
central nervous system1.92e-1473
anterior neural tube2.78e-1440
nervous system6.11e-1475
regional part of brain7.76e-1446
neural tube1.24e-1352
neural rod1.24e-1352
future spinal cord1.24e-1352
neural keel1.24e-1352
regional part of cerebral cortex1.94e-1317
pre-chordal neural plate4.43e-1149
neurectoderm2.11e-1064
neural plate2.11e-1064
presumptive neural plate2.11e-1064
ectoderm-derived structure4.46e-1095
ectoderm4.46e-1095
presumptive ectoderm4.46e-1095
ecto-epithelium1.11e-0873
occipital lobe6.39e-0810
visual cortex6.39e-0810
neocortex6.39e-0810
structure with developmental contribution from neural crest4.54e-0792
Ammon's horn5.50e-077
lobe parts of cerebral cortex5.50e-077
hippocampal formation5.50e-077
limbic system5.50e-077
limbic lobe5.50e-077
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