FFCP PHASE1:Mm9::chr3:96433842..96433878,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=60365 | |EntrezGene=60365 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=878 | |||
|TSSclassifier=NA | |||
|UniProt=Q9CWZ3 | |UniProt=Q9CWZ3 | ||
|association_with_transcript=0bp_to_ENSMUST00000048915,NM_001102407,NM_025875,uc008qnk.2,uc008qnl.2_5end | |association_with_transcript=0bp_to_ENSMUST00000048915,NM_001102407,NM_025875,uc008qnk.2,uc008qnl.2_5end | ||
|cluster_id=chr3:96433842..96433878,+ | |||
|description=CAGE_peak_1_at_Rbm8a_5end | |description=CAGE_peak_1_at_Rbm8a_5end | ||
|id=chr3:96433842..96433878,+ | |id=chr3:96433842..96433878,+ | ||
|ontology_enrichment_celltype=CL:0000063!9.26e-16!66;CL:0000988!6.51e-10!32;CL:0002032!6.51e-10!32;CL:0000037!6.51e-10!32;CL:0000566!6.51e-10!32;CL:0000837!6.51e-10!32;CL:0002076!1.49e-08!15;CL:0002031!8.60e-08!25;CL:0000542!1.14e-07!13;CL:0000051!1.14e-07!13;CL:0000066!1.37e-07!25;CL:0000838!1.97e-07!12;CL:0002320!3.05e-07!46;CL:0000134!3.05e-07!46;CL:0000084!8.14e-07!11;CL:0000827!8.14e-07!11 | |ontology_enrichment_celltype=CL:0000063!9.26e-16!66;CL:0000988!6.51e-10!32;CL:0002032!6.51e-10!32;CL:0000037!6.51e-10!32;CL:0000566!6.51e-10!32;CL:0000837!6.51e-10!32;CL:0002076!1.49e-08!15;CL:0002031!8.60e-08!25;CL:0000542!1.14e-07!13;CL:0000051!1.14e-07!13;CL:0000066!1.37e-07!25;CL:0000838!1.97e-07!12;CL:0002320!3.05e-07!46;CL:0000134!3.05e-07!46;CL:0000084!8.14e-07!11;CL:0000827!8.14e-07!11 | ||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.21e-11,32;CL:0002032,1.21e-11,32;CL:0000037,1.21e-11,32;CL:0000837,1.21e-11,32;CL:0002320,1.95e-09,46;CL:0000134,1.95e-09,46;CL:0002031,2.89e-09,25;CL:0002076,2.97e-09,15;CL:0000066,7.92e-09,25;CL:0000542,2.78e-08,13;CL:0000051,2.78e-08,13;CL:0000838,5.09e-08,12;CL:0000219,1.95e-07,54;CL:0000738,2.06e-07,17;CL:0002087,2.06e-07,17;CL:0000084,2.41e-07,11;CL:0000827,2.41e-07,11;CL:0000791,6.35e-07,9;CL:0000789,6.35e-07,9;CL:0002420,6.35e-07,9;CL:0002419,6.35e-07,9;CL:0000790,6.35e-07,9;CL:0000223,7.15e-07,20 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!3.05e-07!46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.95e-09,46;UBERON:0002193,5.62e-07,48;UBERON:0002405,5.62e-07,48;UBERON:0000344,9.69e-07,15 | |||
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| ||
|short_description=p1@Rbm8a | |short_description=p1@Rbm8a | ||
}} | }} |
Latest revision as of 00:38, 26 September 2015
Short description: | p1@Rbm8a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Rbm8a_5end |
Coexpression cluster: | MCL_coexpression_mm9:878 |
Association with transcript: | 0bp_to_ENSMUST00000048915, NM_001102407, NM_025875, uc008qnk.2, uc008qnl.2_5end |
EntrezGene: | Rbm8a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.21e-11 | 32 |
hematopoietic oligopotent progenitor cell | 1.21e-11 | 32 |
hematopoietic stem cell | 1.21e-11 | 32 |
hematopoietic multipotent progenitor cell | 1.21e-11 | 32 |
connective tissue cell | 1.95e-09 | 46 |
mesenchymal cell | 1.95e-09 | 46 |
hematopoietic lineage restricted progenitor cell | 2.89e-09 | 25 |
endo-epithelial cell | 2.97e-09 | 15 |
epithelial cell | 7.92e-09 | 25 |
lymphocyte | 2.78e-08 | 13 |
common lymphoid progenitor | 2.78e-08 | 13 |
lymphoid lineage restricted progenitor cell | 5.09e-08 | 12 |
motile cell | 1.95e-07 | 54 |
leukocyte | 2.06e-07 | 17 |
nongranular leukocyte | 2.06e-07 | 17 |
T cell | 2.41e-07 | 11 |
pro-T cell | 2.41e-07 | 11 |
mature alpha-beta T cell | 6.35e-07 | 9 |
alpha-beta T cell | 6.35e-07 | 9 |
immature T cell | 6.35e-07 | 9 |
mature T cell | 6.35e-07 | 9 |
immature alpha-beta T cell | 6.35e-07 | 9 |
endodermal cell | 7.15e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.95e-09 | 46 |
hemolymphoid system | 5.62e-07 | 48 |
immune system | 5.62e-07 | 48 |
mucosa | 9.69e-07 | 15 |