FFCP PHASE1:Mm9::chr19:57193387..57193469,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr19:57193387..57193469,- to FFCP PHASE1:Mm9::chr19:57193387..57193469,-: NSchange) |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=226251 | |EntrezGene=226251 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=33 | |||
|TSSclassifier=NA | |||
|UniProt=E9Q9Q7 | |UniProt=E9Q9Q7 | ||
|association_with_transcript=0bp_to_ENSMUST00000111526,uc008hzy.1_5end | |||
|cluster_id=chr19:57193387..57193469,- | |||
|description=CAGE_peak_1_at_Ablim1_5end | |||
|id=chr19:57193387..57193469,- | |||
|ontology_enrichment_celltype=CL:0000542!4.08e-08!13;CL:0000051!4.08e-08!13;CL:0000838!4.44e-08!12;CL:0000084!1.47e-07!11;CL:0000827!1.47e-07!11;CL:0000791!5.32e-07!9;CL:0000789!5.32e-07!9;CL:0002420!5.32e-07!9;CL:0002419!5.32e-07!9;CL:0000790!5.32e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,4.00e-08,13;CL:0000051,4.00e-08,13;CL:0000838,4.35e-08,12;CL:0000084,1.44e-07,11;CL:0000827,1.44e-07,11;CL:0000791,5.23e-07,9;CL:0000789,5.23e-07,9;CL:0002420,5.23e-07,9;CL:0002419,5.23e-07,9;CL:0000790,5.23e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001004!1.21e-13!42;UBERON:0000065!2.85e-13!41;UBERON:0004177!5.61e-12!29;UBERON:0006562!9.89e-12!24;UBERON:0001557!9.89e-12!24;UBERON:0001042!9.89e-12!24;UBERON:0008814!9.89e-12!24;UBERON:0009145!9.89e-12!24;UBERON:0003408!1.26e-11!24;UBERON:0002370!2.81e-11!23;UBERON:0000974!2.81e-11!23;UBERON:0004807!2.81e-11!23;UBERON:0005058!2.81e-11!23;UBERON:0003351!2.81e-11!23;UBERON:0009113!2.81e-11!23;UBERON:0003295!2.81e-11!23;UBERON:0009722!2.81e-11!23;UBERON:0005562!2.81e-11!23;UBERON:0007690!2.81e-11!23;UBERON:0000072!4.45e-09!27;UBERON:0000063!2.12e-08!35;UBERON:0002193!5.21e-07!48 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001004,1.04e-13,42;UBERON:0000065,2.45e-13,41;UBERON:0004177,4.79e-12,29;UBERON:0005057,4.79e-12,29;UBERON:0000153,7.45e-12,43;UBERON:0000077,7.87e-12,35;UBERON:0006562,8.37e-12,24;UBERON:0001557,8.37e-12,24;UBERON:0001042,8.37e-12,24;UBERON:0008814,8.37e-12,24;UBERON:0009145,8.37e-12,24;UBERON:0003408,1.07e-11,24;UBERON:0007811,1.48e-11,36;UBERON:0002370,2.38e-11,23;UBERON:0000974,2.38e-11,23;UBERON:0004807,2.38e-11,23;UBERON:0005058,2.38e-11,23;UBERON:0003351,2.38e-11,23;UBERON:0009113,2.38e-11,23;UBERON:0003295,2.38e-11,23;UBERON:0009722,2.38e-11,23;UBERON:0005562,2.38e-11,23;UBERON:0007690,2.38e-11,23;UBERON:0000072,3.89e-09,27;UBERON:0002193,3.29e-07,48;UBERON:0002405,3.29e-07,48;UBERON:0001041,5.76e-07,80 | |||
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| ||
|short_description=p1@Ablim1 | |||
}} | }} |
Latest revision as of 00:28, 26 September 2015
Short description: | p1@Ablim1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ablim1_5end |
Coexpression cluster: | MCL_coexpression_mm9:33 |
Association with transcript: | 0bp_to_ENSMUST00000111526, uc008hzy.1_5end |
EntrezGene: | Ablim1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 4.00e-08 | 13 |
common lymphoid progenitor | 4.00e-08 | 13 |
lymphoid lineage restricted progenitor cell | 4.35e-08 | 12 |
T cell | 1.44e-07 | 11 |
pro-T cell | 1.44e-07 | 11 |
mature alpha-beta T cell | 5.23e-07 | 9 |
alpha-beta T cell | 5.23e-07 | 9 |
immature T cell | 5.23e-07 | 9 |
mature T cell | 5.23e-07 | 9 |
immature alpha-beta T cell | 5.23e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
respiratory system | 1.04e-13 | 42 |
respiratory tract | 2.45e-13 | 41 |
hemopoietic organ | 4.79e-12 | 29 |
immune organ | 4.79e-12 | 29 |
anterior region of body | 7.45e-12 | 43 |
mixed endoderm/mesoderm-derived structure | 7.87e-12 | 35 |
pharynx | 8.37e-12 | 24 |
upper respiratory tract | 8.37e-12 | 24 |
chordate pharynx | 8.37e-12 | 24 |
pharyngeal arch system | 8.37e-12 | 24 |
pharyngeal region of foregut | 8.37e-12 | 24 |
gland of gut | 1.07e-11 | 24 |
craniocervical region | 1.48e-11 | 36 |
thymus | 2.38e-11 | 23 |
neck | 2.38e-11 | 23 |
respiratory system epithelium | 2.38e-11 | 23 |
hemolymphoid system gland | 2.38e-11 | 23 |
pharyngeal epithelium | 2.38e-11 | 23 |
thymic region | 2.38e-11 | 23 |
pharyngeal gland | 2.38e-11 | 23 |
entire pharyngeal arch endoderm | 2.38e-11 | 23 |
thymus primordium | 2.38e-11 | 23 |
early pharyngeal endoderm | 2.38e-11 | 23 |
segment of respiratory tract | 3.89e-09 | 27 |
hemolymphoid system | 3.29e-07 | 48 |
immune system | 3.29e-07 | 48 |
foregut | 5.76e-07 | 80 |