FFCP PHASE1:Mm9::chr10:40603326..40603404,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:40603326..40603404,+
|short_description=p2@Wasf1
|description=CAGE_peak_2_at_Wasf1_5end
|association_with_transcript=0bp_to_NM_031877,uc007exi.2_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=83767 | |EntrezGene=83767 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2 | |||
|TSSclassifier=NA | |||
|UniProt=Q8R5H6 | |UniProt=Q8R5H6 | ||
|association_with_transcript=0bp_to_NM_031877,uc007exi.2_5end | |||
|cluster_id=chr10:40603326..40603404,+ | |||
|description=CAGE_peak_2_at_Wasf1_5end | |||
|id=chr10:40603326..40603404,+ | |||
|ontology_enrichment_celltype=CL:0000540!1.37e-13!33;CL:0000047!1.37e-13!33;CL:0000031!1.37e-13!33;CL:0000404!1.37e-13!33;CL:0000221!1.42e-12!44;CL:0000133!1.42e-12!44;CL:0002319!3.56e-12!43;CL:0000117!3.08e-11!23;CL:0000337!3.08e-11!23;CL:0000393!7.44e-11!39;CL:0000211!7.44e-11!39;CL:0000055!6.97e-10!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.93e-15,33;CL:0000047,1.93e-15,33;CL:0000031,1.93e-15,33;CL:0000404,1.93e-15,33;CL:0000221,7.99e-13,44;CL:0000133,7.99e-13,44;CL:0000117,8.16e-13,23;CL:0000337,8.16e-13,23;CL:0002319,2.20e-12,43;CL:0000393,2.69e-12,39;CL:0000211,2.69e-12,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.44e-28!73;UBERON:0005743!1.44e-28!73;UBERON:0000073!6.82e-28!75;UBERON:0001016!6.82e-28!75;UBERON:0004121!2.82e-25!102;UBERON:0000924!2.82e-25!102;UBERON:0006601!2.82e-25!102;UBERON:0002346!4.99e-23!71;UBERON:0003075!4.99e-23!71;UBERON:0007284!4.99e-23!71;UBERON:0001049!1.25e-22!52;UBERON:0005068!1.25e-22!52;UBERON:0006241!1.25e-22!52;UBERON:0007135!1.25e-22!52;UBERON:0000955!1.02e-19!50;UBERON:0006238!1.02e-19!50;UBERON:0000033!1.97e-19!63;UBERON:0002020!3.73e-19!34;UBERON:0002616!4.67e-19!49;UBERON:0003056!3.85e-18!49;UBERON:0003080!2.03e-17!40;UBERON:0002780!6.73e-17!39;UBERON:0001890!6.73e-17!39;UBERON:0006240!6.73e-17!39;UBERON:0002791!3.72e-16!29;UBERON:0003528!3.72e-16!29;UBERON:0001893!3.72e-16!29;UBERON:0000956!6.19e-12!21;UBERON:0001869!6.19e-12!21;UBERON:0000203!6.19e-12!21;UBERON:0002619!7.41e-10!17;UBERON:0000153!1.00e-09!94;UBERON:0007811!3.85e-08!86;UBERON:0002021!3.99e-08!10;UBERON:0000411!3.99e-08!10;UBERON:0001950!3.99e-08!10;UBERON:0000025!1.87e-07!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.93e-30,73;UBERON:0001016,7.03e-29,75;UBERON:0004121,1.24e-26,95;UBERON:0000924,1.24e-26,95;UBERON:0006601,1.24e-26,95;UBERON:0002346,3.88e-25,64;UBERON:0003075,3.88e-25,64;UBERON:0007284,3.88e-25,64;UBERON:0001049,2.47e-23,52;UBERON:0005068,2.47e-23,52;UBERON:0006241,2.47e-23,52;UBERON:0007135,2.47e-23,52;UBERON:0000073,3.52e-23,54;UBERON:0010371,4.33e-23,73;UBERON:0002020,1.04e-20,34;UBERON:0000955,5.15e-20,47;UBERON:0006238,5.15e-20,47;UBERON:0002616,2.77e-19,46;UBERON:0003056,1.06e-18,49;UBERON:0010314,6.14e-18,92;UBERON:0003080,6.57e-18,40;UBERON:0003528,2.39e-17,29;UBERON:0002791,2.39e-17,29;UBERON:0001893,2.39e-17,29;UBERON:0002780,2.48e-17,39;UBERON:0001890,2.48e-17,39;UBERON:0006240,2.48e-17,39;UBERON:0000956,1.31e-12,21;UBERON:0001869,1.31e-12,21;UBERON:0000203,1.31e-12,21;UBERON:0002619,2.80e-10,17;UBERON:0002021,5.98e-09,10;UBERON:0000411,5.98e-09,10;UBERON:0001950,5.98e-09,10 | |||
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| ||
|short_description=p2@Wasf1 | |||
}} | }} |
Latest revision as of 00:08, 26 September 2015
Short description: | p2@Wasf1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Wasf1_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | 0bp_to_NM_031877, uc007exi.2_5end |
EntrezGene: | Wasf1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.93e-15 | 33 |
neuronal stem cell | 1.93e-15 | 33 |
neuroblast | 1.93e-15 | 33 |
electrically signaling cell | 1.93e-15 | 33 |
ectodermal cell | 7.99e-13 | 44 |
neurectodermal cell | 7.99e-13 | 44 |
CNS neuron (sensu Vertebrata) | 8.16e-13 | 23 |
neuroblast (sensu Vertebrata) | 8.16e-13 | 23 |
neural cell | 2.20e-12 | 43 |
electrically responsive cell | 2.69e-12 | 39 |
electrically active cell | 2.69e-12 | 39 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 4.93e-30 | 73 |
nervous system | 7.03e-29 | 75 |
ectoderm-derived structure | 1.24e-26 | 95 |
ectoderm | 1.24e-26 | 95 |
presumptive ectoderm | 1.24e-26 | 95 |
neurectoderm | 3.88e-25 | 64 |
neural plate | 3.88e-25 | 64 |
presumptive neural plate | 3.88e-25 | 64 |
neural tube | 2.47e-23 | 52 |
neural rod | 2.47e-23 | 52 |
future spinal cord | 2.47e-23 | 52 |
neural keel | 2.47e-23 | 52 |
regional part of nervous system | 3.52e-23 | 54 |
ecto-epithelium | 4.33e-23 | 73 |
gray matter | 1.04e-20 | 34 |
brain | 5.15e-20 | 47 |
future brain | 5.15e-20 | 47 |
regional part of brain | 2.77e-19 | 46 |
pre-chordal neural plate | 1.06e-18 | 49 |
structure with developmental contribution from neural crest | 6.14e-18 | 92 |
anterior neural tube | 6.57e-18 | 40 |
brain grey matter | 2.39e-17 | 29 |
regional part of telencephalon | 2.39e-17 | 29 |
telencephalon | 2.39e-17 | 29 |
regional part of forebrain | 2.48e-17 | 39 |
forebrain | 2.48e-17 | 39 |
future forebrain | 2.48e-17 | 39 |
cerebral cortex | 1.31e-12 | 21 |
cerebral hemisphere | 1.31e-12 | 21 |
pallium | 1.31e-12 | 21 |
regional part of cerebral cortex | 2.80e-10 | 17 |
occipital lobe | 5.98e-09 | 10 |
visual cortex | 5.98e-09 | 10 |
neocortex | 5.98e-09 | 10 |