FFCP PHASE1:Mm9::chr7:135831994..135832014,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=101490|HGNC=|MCL_coexpression_id=87|UniProt=Q8CDA1|association_with_transcript=0bp_to_ENSMUST00000118605,uc009jzg.1_5end|description=CAGE_peak_3_at_Inpp5f_5end|id=chr7:135831994..135832014,+|ontology_enrichment_celltype=CL:0000540!1.81e-17!33;CL:0000047!1.81e-17!33;CL:0000031!1.81e-17!33;CL:0000404!1.81e-17!33;CL:0000117!5.71e-17!23;CL:0000337!5.71e-17!23;CL:0000221!3.55e-13!44;CL:0000133!3.55e-13!44;CL:0002319!5.15e-13!43;CL:0000393!1.66e-12!39;CL:0000211!1.66e-12!39;CL:0000055!4.22e-09!50|ontology_enrichment_celltype_v019_2=CL:0000117,4.09e-22,23;CL:0000337,4.09e-22,23;CL:0000540,8.16e-21,33;CL:0000047,8.16e-21,33;CL:0000031,8.16e-21,33;CL:0000404,8.16e-21,33;CL:0000393,1.00e-15,39;CL:0000211,1.00e-15,39;CL:0000221,2.13e-13,44;CL:0000133,2.13e-13,44;CL:0002319,3.55e-13,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!2.98e-29!75;UBERON:0001016!2.98e-29!75;UBERON:0001017!3.19e-29!73;UBERON:0005743!3.19e-29!73;UBERON:0002346!3.00e-28!71;UBERON:0003075!3.00e-28!71;UBERON:0007284!3.00e-28!71;UBERON:0004121!3.83e-26!102;UBERON:0000924!3.83e-26!102;UBERON:0006601!3.83e-26!102;UBERON:0001049!1.68e-24!52;UBERON:0005068!1.68e-24!52;UBERON:0006241!1.68e-24!52;UBERON:0007135!1.68e-24!52;UBERON:0000033!1.56e-22!63;UBERON:0000955!1.68e-22!50;UBERON:0006238!1.68e-22!50;UBERON:0002616!6.36e-22!49;UBERON:0003056!2.61e-20!49;UBERON:0002020!3.15e-19!34;UBERON:0003080!7.26e-19!40;UBERON:0002780!3.42e-18!39;UBERON:0001890!3.42e-18!39;UBERON:0006240!3.42e-18!39;UBERON:0007811!1.05e-15!86;UBERON:0002791!2.00e-15!29;UBERON:0003528!2.00e-15!29;UBERON:0001893!2.00e-15!29;UBERON:0000153!2.95e-12!94;UBERON:0000956!4.30e-10!21;UBERON:0001869!4.30e-10!21;UBERON:0000203!4.30e-10!21;UBERON:0002619!8.68e-08!17;UBERON:0002420!9.25e-07!8;UBERON:0007245!9.25e-07!8;UBERON:0010009!9.25e-07!8;UBERON:0010011!9.25e-07!8;UBERON:0000454!9.25e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.32e-34,73;UBERON:0001016,4.82e-33,75;UBERON:0000073,1.06e-32,54;UBERON:0002346,1.40e-32,64;UBERON:0003075,1.40e-32,64;UBERON:0007284,1.40e-32,64;UBERON:0001049,7.52e-31,52;UBERON:0005068,7.52e-31,52;UBERON:0006241,7.52e-31,52;UBERON:0007135,7.52e-31,52;UBERON:0004121,1.57e-28,95;UBERON:0000924,1.57e-28,95;UBERON:0006601,1.57e-28,95;UBERON:0010371,8.04e-27,73;UBERON:0000955,1.28e-25,47;UBERON:0006238,1.28e-25,47;UBERON:0002020,6.46e-25,34;UBERON:0002616,7.15e-25,46;UBERON:0003056,3.91e-24,49;UBERON:0003080,1.53e-23,40;UBERON:0002780,1.19e-22,39;UBERON:0001890,1.19e-22,39;UBERON:0006240,1.19e-22,39;UBERON:0010314,1.01e-21,92;UBERON:0003528,7.63e-20,29;UBERON:0002791,7.63e-20,29;UBERON:0001893,7.63e-20,29;UBERON:0000956,9.52e-13,21;UBERON:0001869,9.52e-13,21;UBERON:0000203,9.52e-13,21;UBERON:0002619,1.09e-09,17;UBERON:0002420,1.67e-08,8;UBERON:0007245,1.67e-08,8;UBERON:0010009,1.67e-08,8;UBERON:0010011,1.67e-08,8;UBERON:0000454,1.67e-08,8;UBERON:0002021,9.91e-08,10;UBERON:0000411,9.91e-08,10;UBERON:0001950,9.91e-08,10;UBERON:0003076,1.20e-07,12;UBERON:0003057,1.20e-07,12;UBERON:0002240,4.47e-07,6;UBERON:0005174,4.47e-07,6;UBERON:0001137,4.47e-07,6|phase1_expression=0.640595388419176,0,0,0,0,0,0,1.42035655785734,0.140788722151667,0.70219357896598,0,0,0.171200729931206,0.34968160967599,0,0.202475267389826,0,0,0,0,2.21112554392781,0,0,0.159992422793407,0,0,0,0,0,0,0,2.54012269383853,0.61506478758457,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0.183546752161682,0,0.218025156380447,0.219686182734472,0,0.279972843250725,0,0,0,0,0,0,0,47.3420518411459,64.007908491916,47.5373552629634,0,0,0,0,0,0.599200221036809,0,17.5235444801327,26.191152036348,22.2944459032465,43.1332986449743,48.1493419274518,32.3375709927479,28.2744139503797,26.6573448116906,22.0231761998777,19.7915374032041,20.4296689230804,54.8646956957606,49.7692781197108,56.2586440201301,27.080750903134,21.9477417912355,10.5430790965999,59.5149742656809,60.0808492972214,56.8518309767167,0.454357159999104,0.755715601067855,0,0,0,0,0,0,0.702222100658759,0,0,0,1.54927761754349,0,0,0,0,0,0.505524445014783,0.34255163915718,0.258937883647172,1.03909497345377,3.64319186208885,6.08930956624282,1.38369298353635,3.76806601381556,2.93971767839262,0.251333182659351,0,0,0,0,0.220841518460394,0,0,10.2473278954042,11.3101221679266,0,0.359445373517761,0,0,23.5171303865572,30.1950397860293,45.7381841690826,12.3415267336516,13.8086346958378,15.584103341967,22.7137768294861,0,0,0,0.210441855886474,1.43132487258974,0.689706313300419,1.98068342785884,4.9732589885786,3.87808045162569,4.86832137082429,5.34099829990454,5.17406741478031,0,0,0,0,0,0,0,0.398068533636986,0,0,0,0,0,0.180062061461015,0,0.196764231747404,0,0,0,0.116765342367169,0,0,0,0,0,0,8.41159794256509,24.594202358649,0,0,0.853153002140936,0.928946687441754,0.77320476793256,0.80673409849337,0.444756087689741,0.570676878337677,0,0.658795818896044,0.251335208800269,0.596869416123452,0.19496408711912,0,0,0,0.569003702859245,0.456994050438915,0,1.01825663922657,0.387904974335251,0.140271639780637,0,0,0,0,0,0,0,0,0.405720242777006,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0,0.189491411770485,0,0.509235257325564,0,0,0.238043640886014,0.195133647857799,0,0,0,0,0,0,0,0,0,0,20.5504755184374,22.504643825703,0,0,1.26203287766503,3.12350995437311,3.87762115919038,2.38968797952552,1.11399337041197,1.69845918473299,0.809621403349789,3.21481443702443,1.97643888973262,10.9249247583414,0,0.534196811001766,0,0,0,0,0,0.943025398779491,0.295301892880773,0.307435147943927,0.258428293168221,0,0,0.632073515871632,1.05418608574999,0,9.53230896110606,3.06103859853227,0.646793418913773,1.92903331528433,1.77340233642274,4.28085162244969,5.43011767986999,1.8267896946876,0,0,0.220528398054962,0,0,0.0603129249281559,0,0,0,14.2777482548092,0.170870880797853,0,0.185194527369712,0.188368457004691,0.27338845544205,0,0.169978429993855,0.139951452323658,0,0.954670618015114,0.474503990371703,1.01659733563424,0.648032044930808,0.418176592028937,0.87345025498471,0.674321731924103,0.247960367176008,0.26175594198403,0.129614973291793,0,0,0.149516546043979,0,0.194451188344048,0,0,0.117357238645754,0.13020438484395,0.314578033277133,0.241584120826006,0,0,0.405450430580328,0,0.129920822977795,0.179026695667481,0.39736270956253,0.721172697119813,0.147689527174577,0.302899349844443,0.15241361331,0.705783295957884,0.0974578807397524,0.577271049841977,0,0,0.221985953374065,0,0,0,0,0,0,0,13.5540442228096,16.5717085142584,9.16632821503035,16.3260523226503,13.0165678756422,7.55393897389701,8.10027000278167,7.65546045481175,10.4222754066367,10.8729665467882,3.42498247027783,7.98049746802062,5.12200817262403,5.83456120963906,5.65955539095552,6.80220981265052,5.11167473943715,8.44743734679466,8.3438994493872,8.59170519996911,6.33698249725599,5.47016390019621,6.83583004530142,5.50616310681876,5.91585330242817,2.38146845641537,5.09891034157364,5.01563973205633,9.47797571847605,9.12633304833263,11.3146853287187,8.5188386956482,7.62995807831427,7.1219744149841,8.65806299821042,7.02301245500915,8.59761472502031,8.94437018888666,7.4692262615224,3.36685362994643,5.81311588808453,5.91026894253381,6.95692773388472,7.2820315357404,3.2794123866794,9.242991383704,3.04111090979031,6.01638951335235,2.29545998482612,0.220591419119515,0.927471342481686|short_description=p3@Inpp5f}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=101490 | |||
|HGNC= | |||
|MCL_coexpression_id=87 | |||
|TSSclassifier=NA | |||
|UniProt=Q8CDA1 | |||
|association_with_transcript=0bp_to_ENSMUST00000118605,uc009jzg.1_5end | |||
|cluster_id=chr7:135831994..135832014,+ | |||
|description=CAGE_peak_3_at_Inpp5f_5end | |||
|id=chr7:135831994..135832014,+ | |||
|ontology_enrichment_celltype=CL:0000540!1.81e-17!33;CL:0000047!1.81e-17!33;CL:0000031!1.81e-17!33;CL:0000404!1.81e-17!33;CL:0000117!5.71e-17!23;CL:0000337!5.71e-17!23;CL:0000221!3.55e-13!44;CL:0000133!3.55e-13!44;CL:0002319!5.15e-13!43;CL:0000393!1.66e-12!39;CL:0000211!1.66e-12!39;CL:0000055!4.22e-09!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.09e-22,23;CL:0000337,4.09e-22,23;CL:0000540,8.16e-21,33;CL:0000047,8.16e-21,33;CL:0000031,8.16e-21,33;CL:0000404,8.16e-21,33;CL:0000393,1.00e-15,39;CL:0000211,1.00e-15,39;CL:0000221,2.13e-13,44;CL:0000133,2.13e-13,44;CL:0002319,3.55e-13,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.98e-29!75;UBERON:0001016!2.98e-29!75;UBERON:0001017!3.19e-29!73;UBERON:0005743!3.19e-29!73;UBERON:0002346!3.00e-28!71;UBERON:0003075!3.00e-28!71;UBERON:0007284!3.00e-28!71;UBERON:0004121!3.83e-26!102;UBERON:0000924!3.83e-26!102;UBERON:0006601!3.83e-26!102;UBERON:0001049!1.68e-24!52;UBERON:0005068!1.68e-24!52;UBERON:0006241!1.68e-24!52;UBERON:0007135!1.68e-24!52;UBERON:0000033!1.56e-22!63;UBERON:0000955!1.68e-22!50;UBERON:0006238!1.68e-22!50;UBERON:0002616!6.36e-22!49;UBERON:0003056!2.61e-20!49;UBERON:0002020!3.15e-19!34;UBERON:0003080!7.26e-19!40;UBERON:0002780!3.42e-18!39;UBERON:0001890!3.42e-18!39;UBERON:0006240!3.42e-18!39;UBERON:0007811!1.05e-15!86;UBERON:0002791!2.00e-15!29;UBERON:0003528!2.00e-15!29;UBERON:0001893!2.00e-15!29;UBERON:0000153!2.95e-12!94;UBERON:0000956!4.30e-10!21;UBERON:0001869!4.30e-10!21;UBERON:0000203!4.30e-10!21;UBERON:0002619!8.68e-08!17;UBERON:0002420!9.25e-07!8;UBERON:0007245!9.25e-07!8;UBERON:0010009!9.25e-07!8;UBERON:0010011!9.25e-07!8;UBERON:0000454!9.25e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.32e-34,73;UBERON:0001016,4.82e-33,75;UBERON:0000073,1.06e-32,54;UBERON:0002346,1.40e-32,64;UBERON:0003075,1.40e-32,64;UBERON:0007284,1.40e-32,64;UBERON:0001049,7.52e-31,52;UBERON:0005068,7.52e-31,52;UBERON:0006241,7.52e-31,52;UBERON:0007135,7.52e-31,52;UBERON:0004121,1.57e-28,95;UBERON:0000924,1.57e-28,95;UBERON:0006601,1.57e-28,95;UBERON:0010371,8.04e-27,73;UBERON:0000955,1.28e-25,47;UBERON:0006238,1.28e-25,47;UBERON:0002020,6.46e-25,34;UBERON:0002616,7.15e-25,46;UBERON:0003056,3.91e-24,49;UBERON:0003080,1.53e-23,40;UBERON:0002780,1.19e-22,39;UBERON:0001890,1.19e-22,39;UBERON:0006240,1.19e-22,39;UBERON:0010314,1.01e-21,92;UBERON:0003528,7.63e-20,29;UBERON:0002791,7.63e-20,29;UBERON:0001893,7.63e-20,29;UBERON:0000956,9.52e-13,21;UBERON:0001869,9.52e-13,21;UBERON:0000203,9.52e-13,21;UBERON:0002619,1.09e-09,17;UBERON:0002420,1.67e-08,8;UBERON:0007245,1.67e-08,8;UBERON:0010009,1.67e-08,8;UBERON:0010011,1.67e-08,8;UBERON:0000454,1.67e-08,8;UBERON:0002021,9.91e-08,10;UBERON:0000411,9.91e-08,10;UBERON:0001950,9.91e-08,10;UBERON:0003076,1.20e-07,12;UBERON:0003057,1.20e-07,12;UBERON:0002240,4.47e-07,6;UBERON:0005174,4.47e-07,6;UBERON:0001137,4.47e-07,6 | |||
|phase1_expression=0.640595388419176,0,0,0,0,0,0,1.42035655785734,0.140788722151667,0.70219357896598,0,0,0.171200729931206,0.34968160967599,0,0.202475267389826,0,0,0,0,2.21112554392781,0,0,0.159992422793407,0,0,0,0,0,0,0,2.54012269383853,0.61506478758457,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0.183546752161682,0,0.218025156380447,0.219686182734472,0,0.279972843250725,0,0,0,0,0,0,0,47.3420518411459,64.007908491916,47.5373552629634,0,0,0,0,0,0.599200221036809,0,17.5235444801327,26.191152036348,22.2944459032465,43.1332986449743,48.1493419274518,32.3375709927479,28.2744139503797,26.6573448116906,22.0231761998777,19.7915374032041,20.4296689230804,54.8646956957606,49.7692781197108,56.2586440201301,27.080750903134,21.9477417912355,10.5430790965999,59.5149742656809,60.0808492972214,56.8518309767167,0.454357159999104,0.755715601067855,0,0,0,0,0,0,0.702222100658759,0,0,0,1.54927761754349,0,0,0,0,0,0.505524445014783,0.34255163915718,0.258937883647172,1.03909497345377,3.64319186208885,6.08930956624282,1.38369298353635,3.76806601381556,2.93971767839262,0.251333182659351,0,0,0,0,0.220841518460394,0,0,10.2473278954042,11.3101221679266,0,0.359445373517761,0,0,23.5171303865572,30.1950397860293,45.7381841690826,12.3415267336516,13.8086346958378,15.584103341967,22.7137768294861,0,0,0,0.210441855886474,1.43132487258974,0.689706313300419,1.98068342785884,4.9732589885786,3.87808045162569,4.86832137082429,5.34099829990454,5.17406741478031,0,0,0,0,0,0,0,0.398068533636986,0,0,0,0,0,0.180062061461015,0,0.196764231747404,0,0,0,0.116765342367169,0,0,0,0,0,0,8.41159794256509,24.594202358649,0,0,0.853153002140936,0.928946687441754,0.77320476793256,0.80673409849337,0.444756087689741,0.570676878337677,0,0.658795818896044,0.251335208800269,0.596869416123452,0.19496408711912,0,0,0,0.569003702859245,0.456994050438915,0,1.01825663922657,0.387904974335251,0.140271639780637,0,0,0,0,0,0,0,0,0.405720242777006,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0,0.189491411770485,0,0.509235257325564,0,0,0.238043640886014,0.195133647857799,0,0,0,0,0,0,0,0,0,0,20.5504755184374,22.504643825703,0,0,1.26203287766503,3.12350995437311,3.87762115919038,2.38968797952552,1.11399337041197,1.69845918473299,0.809621403349789,3.21481443702443,1.97643888973262,10.9249247583414,0,0.534196811001766,0,0,0,0,0,0.943025398779491,0.295301892880773,0.307435147943927,0.258428293168221,0,0,0.632073515871632,1.05418608574999,0,9.53230896110606,3.06103859853227,0.646793418913773,1.92903331528433,1.77340233642274,4.28085162244969,5.43011767986999,1.8267896946876,0,0,0.220528398054962,0,0,0.0603129249281559,0,0,0,14.2777482548092,0.170870880797853,0,0.185194527369712,0.188368457004691,0.27338845544205,0,0.169978429993855,0.139951452323658,0,0.954670618015114,0.474503990371703,1.01659733563424,0.648032044930808,0.418176592028937,0.87345025498471,0.674321731924103,0.247960367176008,0.26175594198403,0.129614973291793,0,0,0.149516546043979,0,0.194451188344048,0,0,0.117357238645754,0.13020438484395,0.314578033277133,0.241584120826006,0,0,0.405450430580328,0,0.129920822977795,0.179026695667481,0.39736270956253,0.721172697119813,0.147689527174577,0.302899349844443,0.15241361331,0.705783295957884,0.0974578807397524,0.577271049841977,0,0,0.221985953374065,0,0,0,0,0,0,0,13.5540442228096,16.5717085142584,9.16632821503035,16.3260523226503,13.0165678756422,7.55393897389701,8.10027000278167,7.65546045481175,10.4222754066367,10.8729665467882,3.42498247027783,7.98049746802062,5.12200817262403,5.83456120963906,5.65955539095552,6.80220981265052,5.11167473943715,8.44743734679466,8.3438994493872,8.59170519996911,6.33698249725599,5.47016390019621,6.83583004530142,5.50616310681876,5.91585330242817,2.38146845641537,5.09891034157364,5.01563973205633,9.47797571847605,9.12633304833263,11.3146853287187,8.5188386956482,7.62995807831427,7.1219744149841,8.65806299821042,7.02301245500915,8.59761472502031,8.94437018888666,7.4692262615224,3.36685362994643,5.81311588808453,5.91026894253381,6.95692773388472,7.2820315357404,3.2794123866794,9.242991383704,3.04111090979031,6.01638951335235,2.29545998482612,0.220591419119515,0.927471342481686 | |||
|short_description=p3@Inpp5f | |||
}} |
Latest revision as of 23:55, 25 September 2015
Short description: | p3@Inpp5f |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Inpp5f_5end |
Coexpression cluster: | MCL_coexpression_mm9:87 |
Association with transcript: | 0bp_to_ENSMUST00000118605, uc009jzg.1_5end |
EntrezGene: | Inpp5f |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.09e-22 | 23 |
neuroblast (sensu Vertebrata) | 4.09e-22 | 23 |
neuron | 8.16e-21 | 33 |
neuronal stem cell | 8.16e-21 | 33 |
neuroblast | 8.16e-21 | 33 |
electrically signaling cell | 8.16e-21 | 33 |
electrically responsive cell | 1.00e-15 | 39 |
electrically active cell | 1.00e-15 | 39 |
ectodermal cell | 2.13e-13 | 44 |
neurectodermal cell | 2.13e-13 | 44 |
neural cell | 3.55e-13 | 43 |