FFCP PHASE1:Mm9::chr2:156022443..156022511,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=228829 | |EntrezGene=228829 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENSMUST00000132129,ENSMUST00000135796,ENSMUST00000152617_5end | |association_with_transcript=0bp_to_ENSMUST00000132129,ENSMUST00000135796,ENSMUST00000152617_5end | ||
|cluster_id=chr2:156022443..156022511,+ | |||
|description=CAGE_peak_1_at_Phf20_5end | |description=CAGE_peak_1_at_Phf20_5end | ||
|id=chr2:156022443..156022511,+ | |id=chr2:156022443..156022511,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000153!1.05e-14!94;UBERON:0007811!2.27e-13!86;UBERON:0002346!2.79e-10!71;UBERON:0003075!2.79e-10!71;UBERON:0007284!2.79e-10!71;UBERON:0000033!3.79e-10!63;UBERON:0000955!8.27e-10!50;UBERON:0006238!8.27e-10!50;UBERON:0003056!2.18e-09!49;UBERON:0004121!2.33e-09!102;UBERON:0000924!2.33e-09!102;UBERON:0006601!2.33e-09!102;UBERON:0002616!2.80e-09!49;UBERON:0000073!9.25e-09!75;UBERON:0001016!9.25e-09!75;UBERON:0001017!9.85e-09!73;UBERON:0005743!9.85e-09!73;UBERON:0001049!2.68e-08!52;UBERON:0005068!2.68e-08!52;UBERON:0006241!2.68e-08!52;UBERON:0007135!2.68e-08!52;UBERON:0003080!7.06e-08!40;UBERON:0002791!1.06e-07!29;UBERON:0003528!1.06e-07!29;UBERON:0001893!1.06e-07!29;UBERON:0002780!2.06e-07!39;UBERON:0001890!2.06e-07!39;UBERON:0006240!2.06e-07!39 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.02e-10,64;UBERON:0003075,1.02e-10,64;UBERON:0007284,1.02e-10,64;UBERON:0004121,1.72e-09,95;UBERON:0000924,1.72e-09,95;UBERON:0006601,1.72e-09,95;UBERON:0010371,2.12e-09,73;UBERON:0003056,2.18e-09,49;UBERON:0000955,4.44e-09,47;UBERON:0006238,4.44e-09,47;UBERON:0001016,9.25e-09,75;UBERON:0001017,9.85e-09,73;UBERON:0002616,1.47e-08,46;UBERON:0000073,1.60e-08,54;UBERON:0001049,2.68e-08,52;UBERON:0005068,2.68e-08,52;UBERON:0006241,2.68e-08,52;UBERON:0007135,2.68e-08,52;UBERON:0003080,7.06e-08,40;UBERON:0003528,1.06e-07,29;UBERON:0002791,1.06e-07,29;UBERON:0001893,1.06e-07,29;UBERON:0010314,1.12e-07,92;UBERON:0002780,2.06e-07,39;UBERON:0001890,2.06e-07,39;UBERON:0006240,2.06e-07,39 | |||
|phase1_expression=17.4562243344225,3.14077866875425,4.09499315450582,5.44435580352294,5.00895729946347,10.9121526742728,10.7461814673942,36.4127772105245,25.764336153755,47.5150988433647,20.8885921235116,44.353320401407,26.8785145991993,39.1643402837108,8.66085380720723,11.1361397064404,6.99561878128147,27.6029394688458,33.8672651006175,28.00971701867,33.8472294801258,19.5603173865744,21.4183827093927,9.27956052201759,8.48814339948529,2.8711598205751,3.01533397311352,5.17130958446134,7.41091335879858,8.56902441183765,8.42575940490158,14.6057054895715,9.84103660135312,0,15.0202842270663,9.47537478543406,13.4751775133164,15.9042019680025,16.4080422349998,14.1351410872926,11.1763982725893,15.0270006690858,9.71020706062307,29.5857522242607,25.1414789424396,23.6775310288569,10.1710874765245,6.5407546914134,7.46933021297204,10.304784650937,9.51907667052465,4.31257693094915,40.4356080599145,25.3876749703971,30.9206295211067,13.6347501099052,15.4728057566929,24.2365883370398,23.0640765379941,19.5726662330652,25.9870875437533,9.82649143000483,8.00365316500025,9.44894703145469,3.9554654502679,7.104801149461,3.89480143673926,6.14749288514487,32.0400902033196,27.4062054813332,30.9177693186532,9.14083150092171,14.5773237028065,28.0503930202245,31.4373144939815,24.8189072384706,20.9220173898839,41.6260722157712,38.4016333140609,24.0033043668953,26.1654660702892,28.6502353806218,24.0097379141188,33.2029939918691,33.6156145108982,22.9810296669461,28.1895927982224,28.1463163196204,20.143167426627,27.5836194389767,32.1749582458862,9.46466264679525,14.2793980078628,5.39703191637817,7.79731700937203,5.82434953226536,19.3813299781818,19.4290567738986,17.4056623083922,14.1335829804136,16.4786801138716,10.2661181931454,15.2883143823987,14.2213340630666,8.01016851741492,6.58735650235256,7.58286667522175,18.1552368753305,40.9121856162531,29.8368699520298,18.7364152907427,20.0947215686013,18.2186242832286,27.7329658616826,25.2815720341765,20.6093209780668,25.2138867089061,21.9791022518266,9.73071607144862,22.8091258425847,17.6673214768315,16.9706338597328,9.31958806090611,58.2633786052979,60.1112048554616,8.68553987709211,19.2902350454532,7.19883277192089,13.723584523891,39.8443100816828,35.2275464170342,42.0942079578096,38.5889990826854,42.4487659168349,34.9083914860061,43.8051410282946,24.2377685963753,21.6468128861562,21.4814344668623,20.2024181651015,31.2289063110489,22.0706020256134,22.147641966058,31.9494213811716,31.2287531104595,34.7188181971943,26.3301846012838,42.1686494304596,24.1436152084783,29.6896545863476,25.5129130037726,17.7548543266336,33.9217644055229,26.8154168222068,24.6938563689532,25.8744546864041,12.6398373716382,12.8673953557358,13.6398479709884,16.1558102577691,22.9835538781474,20.8871991294777,26.0419209143731,25.1858216636677,25.1455394006427,21.8581908065383,17.4377710909752,18.0986280669113,24.8485373369356,23.1476124351524,22.2128538155645,18.8597983778679,25.2482632584708,26.5728709145536,49.628427861134,52.1726384762972,6.60837565967596,6.61126416658861,25.1680135631576,29.4940573262757,23.8404803445873,20.9750865608276,17.7902435075896,17.3105319762429,8.54152310780121,12.8465184684728,14.3261069016154,15.3196483471686,14.4273424468149,9.88701349519644,9.94235029423593,13.7407478545513,15.7424357791058,26.0486608750182,24.7957018480777,23.4199027022111,26.5714907419647,22.3031907251213,26.1166898323183,23.1747932327975,26.5327850051923,25.6666100957345,14.8226313543574,15.3497497258807,13.3660116676978,14.3911751926306,13.9973483758067,11.0941493486112,9.93040821947537,12.083237772934,14.2678999562031,12.0807021802756,31.629005436018,20.4677521217677,19.6583734062173,13.3866805311969,12.7372163600558,11.0962009913574,24.0179147216586,26.5287976478679,23.6299215840938,25.6315079520534,26.2853078083122,27.303519963016,20.4717531161972,22.6355031515047,31.2117585330258,23.6967217924189,24.0776700672806,30.8063031665587,24.3485824430913,25.458234310346,46.7452980211744,31.0026239776664,18.1952781017043,21.2471294654644,42.3853557567771,44.5404409050372,18.3607138821876,34.3360460997947,29.9732808445444,25.7689571235781,34.6831670349806,30.3490373399741,26.5130422158049,31.4214949175604,29.5511812222673,31.2713767965104,25.2984177885775,44.6636629826312,20.4393722699907,25.107250117083,22.1526264720863,24.7455184458803,17.2568679841952,19.4224508923985,17.8370898609203,19.6149282946134,16.2416041084425,20.5981549122431,17.573123935439,26.1744285223804,22.4593348382374,22.4386098134429,15.8127912862498,10.3135543248187,27.5756080660568,23.5880033181016,15.264324686365,24.2200849585699,23.2315706071378,23.7230527410754,24.6823530903181,15.8321773539592,20.8857820176702,23.3015277950202,31.3150325238046,26.3818004706368,25.8343082713449,24.8489250704002,21.7257666085708,18.2196398717018,11.0762717919343,42.4623941604067,16.9162171989874,18.57481811669,22.4085378117351,17.5182665014363,18.1803322868963,16.2432502976631,16.1479508494163,23.0919896334036,19.3479963326193,11.4560474161814,24.9905434929097,25.6182528579829,25.1652444114797,20.9088296014469,21.1811686833792,17.3975006836419,18.5143740824752,15.7053565190418,13.9984171155136,24.2322332103901,27.0572610568411,30.0528257548397,31.7680301677627,28.1954223098869,23.5070878729471,28.5535852079415,28.4004517522725,39.9727461470927,55.5754525456268,53.8732589441993,35.4276907697175,30.3370675803051,19.4616206678558,22.1855667476027,22.2164607292029,23.4524971324401,26.225938831127,28.7267124352726,29.8332844892646,35.540190381748,29.7968614021049,34.6842076870731,33.7204267359543,34.9248985154396,38.9200084264625,17.2315091547561,22.6425672441546,16.2382080463151,23.1680770582428,17.5802530569293,18.0175176433135,20.696133542201,13.5052078819811,33.103758866334,33.3203587144069,28.0798394269378,22.3429250241365,27.8402155396774,34.2541259885321,33.2373314851468,31.0510350106631,31.0721630224712,31.7199686288943,35.2077011991238,25.2203254629549,29.5278406316763,26.1222416803825,22.1227112532148,18.6555714738904,17.0974462858513,26.2251138805906,26.3724873265785,24.7107791385698,20.9738685763952,26.8688057883654,25.0873034043481,26.1259805840972,25.3539603523282,26.7074930643602,27.6250340944183,23.8721711446402,27.0072908649187,23.9009822465918,25.9070099436539,19.8864166383541,24.4916612499886,26.9432894640473,21.3659232449523,27.5740484616919,22.2536418755109,24.5123483649515,25.7808317209086,26.0743898584055,17.9565526930476,21.828843334848,24.4291116291397,18.8246279858057,20.2967261953615,22.1842602628313,26.2301106834843,21.5217079769776,20.4127501345883,16.2595082258517,16.3237650148441,19.0131625208746 | |phase1_expression=17.4562243344225,3.14077866875425,4.09499315450582,5.44435580352294,5.00895729946347,10.9121526742728,10.7461814673942,36.4127772105245,25.764336153755,47.5150988433647,20.8885921235116,44.353320401407,26.8785145991993,39.1643402837108,8.66085380720723,11.1361397064404,6.99561878128147,27.6029394688458,33.8672651006175,28.00971701867,33.8472294801258,19.5603173865744,21.4183827093927,9.27956052201759,8.48814339948529,2.8711598205751,3.01533397311352,5.17130958446134,7.41091335879858,8.56902441183765,8.42575940490158,14.6057054895715,9.84103660135312,0,15.0202842270663,9.47537478543406,13.4751775133164,15.9042019680025,16.4080422349998,14.1351410872926,11.1763982725893,15.0270006690858,9.71020706062307,29.5857522242607,25.1414789424396,23.6775310288569,10.1710874765245,6.5407546914134,7.46933021297204,10.304784650937,9.51907667052465,4.31257693094915,40.4356080599145,25.3876749703971,30.9206295211067,13.6347501099052,15.4728057566929,24.2365883370398,23.0640765379941,19.5726662330652,25.9870875437533,9.82649143000483,8.00365316500025,9.44894703145469,3.9554654502679,7.104801149461,3.89480143673926,6.14749288514487,32.0400902033196,27.4062054813332,30.9177693186532,9.14083150092171,14.5773237028065,28.0503930202245,31.4373144939815,24.8189072384706,20.9220173898839,41.6260722157712,38.4016333140609,24.0033043668953,26.1654660702892,28.6502353806218,24.0097379141188,33.2029939918691,33.6156145108982,22.9810296669461,28.1895927982224,28.1463163196204,20.143167426627,27.5836194389767,32.1749582458862,9.46466264679525,14.2793980078628,5.39703191637817,7.79731700937203,5.82434953226536,19.3813299781818,19.4290567738986,17.4056623083922,14.1335829804136,16.4786801138716,10.2661181931454,15.2883143823987,14.2213340630666,8.01016851741492,6.58735650235256,7.58286667522175,18.1552368753305,40.9121856162531,29.8368699520298,18.7364152907427,20.0947215686013,18.2186242832286,27.7329658616826,25.2815720341765,20.6093209780668,25.2138867089061,21.9791022518266,9.73071607144862,22.8091258425847,17.6673214768315,16.9706338597328,9.31958806090611,58.2633786052979,60.1112048554616,8.68553987709211,19.2902350454532,7.19883277192089,13.723584523891,39.8443100816828,35.2275464170342,42.0942079578096,38.5889990826854,42.4487659168349,34.9083914860061,43.8051410282946,24.2377685963753,21.6468128861562,21.4814344668623,20.2024181651015,31.2289063110489,22.0706020256134,22.147641966058,31.9494213811716,31.2287531104595,34.7188181971943,26.3301846012838,42.1686494304596,24.1436152084783,29.6896545863476,25.5129130037726,17.7548543266336,33.9217644055229,26.8154168222068,24.6938563689532,25.8744546864041,12.6398373716382,12.8673953557358,13.6398479709884,16.1558102577691,22.9835538781474,20.8871991294777,26.0419209143731,25.1858216636677,25.1455394006427,21.8581908065383,17.4377710909752,18.0986280669113,24.8485373369356,23.1476124351524,22.2128538155645,18.8597983778679,25.2482632584708,26.5728709145536,49.628427861134,52.1726384762972,6.60837565967596,6.61126416658861,25.1680135631576,29.4940573262757,23.8404803445873,20.9750865608276,17.7902435075896,17.3105319762429,8.54152310780121,12.8465184684728,14.3261069016154,15.3196483471686,14.4273424468149,9.88701349519644,9.94235029423593,13.7407478545513,15.7424357791058,26.0486608750182,24.7957018480777,23.4199027022111,26.5714907419647,22.3031907251213,26.1166898323183,23.1747932327975,26.5327850051923,25.6666100957345,14.8226313543574,15.3497497258807,13.3660116676978,14.3911751926306,13.9973483758067,11.0941493486112,9.93040821947537,12.083237772934,14.2678999562031,12.0807021802756,31.629005436018,20.4677521217677,19.6583734062173,13.3866805311969,12.7372163600558,11.0962009913574,24.0179147216586,26.5287976478679,23.6299215840938,25.6315079520534,26.2853078083122,27.303519963016,20.4717531161972,22.6355031515047,31.2117585330258,23.6967217924189,24.0776700672806,30.8063031665587,24.3485824430913,25.458234310346,46.7452980211744,31.0026239776664,18.1952781017043,21.2471294654644,42.3853557567771,44.5404409050372,18.3607138821876,34.3360460997947,29.9732808445444,25.7689571235781,34.6831670349806,30.3490373399741,26.5130422158049,31.4214949175604,29.5511812222673,31.2713767965104,25.2984177885775,44.6636629826312,20.4393722699907,25.107250117083,22.1526264720863,24.7455184458803,17.2568679841952,19.4224508923985,17.8370898609203,19.6149282946134,16.2416041084425,20.5981549122431,17.573123935439,26.1744285223804,22.4593348382374,22.4386098134429,15.8127912862498,10.3135543248187,27.5756080660568,23.5880033181016,15.264324686365,24.2200849585699,23.2315706071378,23.7230527410754,24.6823530903181,15.8321773539592,20.8857820176702,23.3015277950202,31.3150325238046,26.3818004706368,25.8343082713449,24.8489250704002,21.7257666085708,18.2196398717018,11.0762717919343,42.4623941604067,16.9162171989874,18.57481811669,22.4085378117351,17.5182665014363,18.1803322868963,16.2432502976631,16.1479508494163,23.0919896334036,19.3479963326193,11.4560474161814,24.9905434929097,25.6182528579829,25.1652444114797,20.9088296014469,21.1811686833792,17.3975006836419,18.5143740824752,15.7053565190418,13.9984171155136,24.2322332103901,27.0572610568411,30.0528257548397,31.7680301677627,28.1954223098869,23.5070878729471,28.5535852079415,28.4004517522725,39.9727461470927,55.5754525456268,53.8732589441993,35.4276907697175,30.3370675803051,19.4616206678558,22.1855667476027,22.2164607292029,23.4524971324401,26.225938831127,28.7267124352726,29.8332844892646,35.540190381748,29.7968614021049,34.6842076870731,33.7204267359543,34.9248985154396,38.9200084264625,17.2315091547561,22.6425672441546,16.2382080463151,23.1680770582428,17.5802530569293,18.0175176433135,20.696133542201,13.5052078819811,33.103758866334,33.3203587144069,28.0798394269378,22.3429250241365,27.8402155396774,34.2541259885321,33.2373314851468,31.0510350106631,31.0721630224712,31.7199686288943,35.2077011991238,25.2203254629549,29.5278406316763,26.1222416803825,22.1227112532148,18.6555714738904,17.0974462858513,26.2251138805906,26.3724873265785,24.7107791385698,20.9738685763952,26.8688057883654,25.0873034043481,26.1259805840972,25.3539603523282,26.7074930643602,27.6250340944183,23.8721711446402,27.0072908649187,23.9009822465918,25.9070099436539,19.8864166383541,24.4916612499886,26.9432894640473,21.3659232449523,27.5740484616919,22.2536418755109,24.5123483649515,25.7808317209086,26.0743898584055,17.9565526930476,21.828843334848,24.4291116291397,18.8246279858057,20.2967261953615,22.1842602628313,26.2301106834843,21.5217079769776,20.4127501345883,16.2595082258517,16.3237650148441,19.0131625208746 | ||
|short_description=p1@Phf20 | |short_description=p1@Phf20 | ||
}} | }} |
Latest revision as of 23:53, 25 September 2015
Short description: | p1@Phf20 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Phf20_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000132129, ENSMUST00000135796, ENSMUST00000152617_5end |
EntrezGene: | Phf20 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectoderm | 1.02e-10 | 64 |
neural plate | 1.02e-10 | 64 |
presumptive neural plate | 1.02e-10 | 64 |
ectoderm-derived structure | 1.72e-09 | 95 |
ectoderm | 1.72e-09 | 95 |
presumptive ectoderm | 1.72e-09 | 95 |
ecto-epithelium | 2.12e-09 | 73 |
pre-chordal neural plate | 2.18e-09 | 49 |
brain | 4.44e-09 | 47 |
future brain | 4.44e-09 | 47 |
nervous system | 9.25e-09 | 75 |
central nervous system | 9.85e-09 | 73 |
regional part of brain | 1.47e-08 | 46 |
regional part of nervous system | 1.60e-08 | 54 |
neural tube | 2.68e-08 | 52 |
neural rod | 2.68e-08 | 52 |
future spinal cord | 2.68e-08 | 52 |
neural keel | 2.68e-08 | 52 |
anterior neural tube | 7.06e-08 | 40 |
brain grey matter | 1.06e-07 | 29 |
regional part of telencephalon | 1.06e-07 | 29 |
telencephalon | 1.06e-07 | 29 |
structure with developmental contribution from neural crest | 1.12e-07 | 92 |
regional part of forebrain | 2.06e-07 | 39 |
forebrain | 2.06e-07 | 39 |
future forebrain | 2.06e-07 | 39 |