Personal tools

FFCP PHASE1:Mm9::chr2:155601069..155601128,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(6 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=17391
|EntrezGene=17391
|HGNC=
|HGNC=
|MCL_coexpression_id=367
|TSSclassifier=NA
|UniProt=Q9R0S2
|UniProt=Q9R0S2
|association_with_transcript=0bp_to_ENSMUST00000029141,NM_010808,uc008nlj.1_5end
|association_with_transcript=0bp_to_ENSMUST00000029141,NM_010808,uc008nlj.1_5end
|cluster_id=chr2:155601069..155601128,+
|description=CAGE_peak_1_at_Mmp24_5end
|description=CAGE_peak_1_at_Mmp24_5end
|id=chr2:155601069..155601128,+
|id=chr2:155601069..155601128,+
|ontology_enrichment_celltype=CL:0000540!5.18e-18!33;CL:0000047!5.18e-18!33;CL:0000031!5.18e-18!33;CL:0000404!5.18e-18!33;CL:0000221!9.19e-17!44;CL:0000133!9.19e-17!44;CL:0000117!1.05e-16!23;CL:0000337!1.05e-16!23;CL:0002319!2.75e-16!43;CL:0000393!1.08e-14!39;CL:0000211!1.08e-14!39;CL:0000055!3.82e-13!50
|ontology_enrichment_celltype_v019_2=CL:0000540,7.41e-22,33;CL:0000047,7.41e-22,33;CL:0000031,7.41e-22,33;CL:0000404,7.41e-22,33;CL:0000117,3.05e-20,23;CL:0000337,3.05e-20,23;CL:0000393,2.00e-16,39;CL:0000211,2.00e-16,39;CL:0000221,6.38e-16,44;CL:0000133,6.38e-16,44;CL:0002319,2.29e-15,43
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!4.89e-34!75;UBERON:0001016!4.89e-34!75;UBERON:0001017!5.00e-34!73;UBERON:0005743!5.00e-34!73;UBERON:0004121!3.36e-32!102;UBERON:0000924!3.36e-32!102;UBERON:0006601!3.36e-32!102;UBERON:0002346!3.58e-32!71;UBERON:0003075!3.58e-32!71;UBERON:0007284!3.58e-32!71;UBERON:0000033!1.67e-27!63;UBERON:0001049!3.60e-27!52;UBERON:0005068!3.60e-27!52;UBERON:0006241!3.60e-27!52;UBERON:0007135!3.60e-27!52;UBERON:0000955!3.50e-25!50;UBERON:0006238!3.50e-25!50;UBERON:0002616!1.73e-24!49;UBERON:0003056!3.49e-23!49;UBERON:0002020!2.91e-21!34;UBERON:0003080!2.51e-20!40;UBERON:0002780!9.72e-20!39;UBERON:0001890!9.72e-20!39;UBERON:0006240!9.72e-20!39;UBERON:0002791!1.83e-17!29;UBERON:0003528!1.83e-17!29;UBERON:0001893!1.83e-17!29;UBERON:0007811!8.65e-13!86;UBERON:0000956!4.01e-12!21;UBERON:0001869!4.01e-12!21;UBERON:0000203!4.01e-12!21;UBERON:0000153!6.50e-10!94;UBERON:0002619!1.28e-09!17;UBERON:0003076!2.53e-07!12;UBERON:0003057!2.53e-07!12;UBERON:0002021!3.08e-07!10;UBERON:0000411!3.08e-07!10;UBERON:0001950!3.08e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.34e-38,73;UBERON:0001016,2.33e-36,75;UBERON:0002346,6.77e-34,64;UBERON:0003075,6.77e-34,64;UBERON:0007284,6.77e-34,64;UBERON:0004121,2.72e-33,95;UBERON:0000924,2.72e-33,95;UBERON:0006601,2.72e-33,95;UBERON:0000073,9.36e-32,54;UBERON:0001049,3.79e-30,52;UBERON:0005068,3.79e-30,52;UBERON:0006241,3.79e-30,52;UBERON:0007135,3.79e-30,52;UBERON:0010371,1.23e-29,73;UBERON:0003056,5.58e-26,49;UBERON:0000955,1.46e-25,47;UBERON:0006238,1.46e-25,47;UBERON:0002616,9.69e-25,46;UBERON:0002020,2.34e-24,34;UBERON:0010314,1.92e-23,92;UBERON:0003080,2.44e-23,40;UBERON:0002780,1.28e-22,39;UBERON:0001890,1.28e-22,39;UBERON:0006240,1.28e-22,39;UBERON:0003528,1.02e-19,29;UBERON:0002791,1.02e-19,29;UBERON:0001893,1.02e-19,29;UBERON:0000956,3.26e-13,21;UBERON:0001869,3.26e-13,21;UBERON:0000203,3.26e-13,21;UBERON:0002619,3.51e-10,17;UBERON:0002021,1.44e-08,10;UBERON:0000411,1.44e-08,10;UBERON:0001950,1.44e-08,10;UBERON:0002420,8.54e-08,8;UBERON:0007245,8.54e-08,8;UBERON:0010009,8.54e-08,8;UBERON:0010011,8.54e-08,8;UBERON:0000454,8.54e-08,8;UBERON:0003076,3.34e-07,12;UBERON:0003057,3.34e-07,12
|phase1_expression=19.0577128054705,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,8.92954546586233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.755380907853464,0.912392380975631,0.183546752161682,0.782391344348039,0.436050312760893,0.439372365468944,0.388859798148567,0.699932108126813,0,0,0,0,0,0,0,60.6949382578793,66.1238724090041,50.0726808769882,0,0.889294796111139,0,0.988866362566974,0,1.79760066311043,2.30530983192933,31.4179525294687,34.021496459586,34.9139435843294,45.132855535801,39.5354688303388,29.8877550084488,22.5236856892855,26.6573448116906,16.5173821499083,24.2605942361857,18.279177457493,66.7344615914781,64.5902763833012,48.4449434617787,31.547678887156,18.5711661310454,18.6413862287708,52.7385167997865,44.4199644093201,60.766219339048,0.832988126665025,0.906858721281426,0,0,0,0,0,0,1.82577746171277,0,0,0,8.87313544593087,0,0,0,0,0.506719730950197,0,0.91347103775248,0,2.3750742250372,2.25530924795977,4.87144765299426,2.7673859670727,3.46662073271032,2.3517741427141,0.753999547978053,0,0.144599356919912,0,0.161766849947409,0,0,0,141.413124956577,163.577878021308,0,0,0,0,18.574039286198,17.3850229071078,49.3821603803557,17.9039049798045,25.0601148183724,17.0386196538839,17.8465389374533,0.81471491080253,0,0,1.26265113531884,0.910843100738926,4.13823787980251,6.84236093260327,7.83665052745718,9.25296388458059,7.94305065766069,8.52685693493532,7.24369438069244,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0.268273401399619,0,0,0,0,0,0,0.134206418760372,21.0289948564127,45.6896478964023,0,0,0,0.232236671860439,1.15980715189884,0.80673409849337,1.55664630691409,1.33157938278791,0,0.658795818896044,0.502670417600539,0.397912944082302,0.58489226135736,0,0,0.199141273254367,0,0.799739588268102,0,0,0,0.0701358198903186,0.189709611372772,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502518772325447,0.476087281772027,0.585400943573396,0,0,0,0,0.172684981865896,0,0,0,0,0,13.8073507389501,16.7612711826851,0.327869890753351,0,4.73262329124385,1.95219372148319,4.52389135238878,1.19484398976276,2.89638276307112,1.98153571552183,3.64329631507405,3.79932615284705,5.13874111330481,26.3483479465882,0,0.35613120733451,0.488660878060728,0,0,0.971122544619926,0.906970670894253,0.188605079755898,0.590603785761546,0.922305443831782,1.55056975900933,1.45413491791002,2.13898427030833,1.26414703174326,0,0,2.04263763452273,1.62054984628179,1.55230420539305,1.71469628025274,2.30542303734956,5.88617098086833,5.43011767986999,10.0473433207818,0,0,0.220528398054962,0,0.161464426695906,0,0,0,0,12.4234952347041,0,0.206386867963223,0,0,0,0,0,0,0,0,0.158167996790568,0.609958401380546,0.540026704109006,1.04544148007234,0.655087691238533,0.539457385539283,1.32245529160537,0,0.388844919875379,0,0.56369293868419,0,0,0,0.258319646955462,0.844780627453891,0.821500670520278,0.13020438484395,0,0,0.864090018773596,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0.443971906748129,0,0.167884616364078,0,0,0,0,0.501572104035363,31.0613513439387,28.540164663445,23.4887160510153,38.6669660273297,21.2375581128899,24.9279986138601,18.2256075062588,20.7147753483141,17.2194115413998,22.7814537170801,2.07574695168353,6.3843979744165,6.31714341290296,8.265628380322,7.1268475293514,7.90527086335061,5.778414922842,5.76898160268904,7.70206103020357,5.81203587056734,7.60437899670719,6.22466926574051,6.27398100048212,8.45132011744274,6.4902079919843,8.57328644309533,7.06894388263618,6.94473193669338,3.70877310722976,7.21274708658547,5.82877729055206,4.79184676630211,7.15308569841963,6.68593516508711,6.58765662907314,7.78454392603424,6.0366231048015,4.99832451731901,7.87663860305998,5.61142271657738,7.3553711236988,7.38783617816726,7.7753898202241,6.04253680625267,6.55882477335881,28.2285953069879,6.78401664491684,6.66100267549725,4.3996316375834,0,0.695603506861264
|phase1_expression=19.0577128054705,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,8.92954546586233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.755380907853464,0.912392380975631,0.183546752161682,0.782391344348039,0.436050312760893,0.439372365468944,0.388859798148567,0.699932108126813,0,0,0,0,0,0,0,60.6949382578793,66.1238724090041,50.0726808769882,0,0.889294796111139,0,0.988866362566974,0,1.79760066311043,2.30530983192933,31.4179525294687,34.021496459586,34.9139435843294,45.132855535801,39.5354688303388,29.8877550084488,22.5236856892855,26.6573448116906,16.5173821499083,24.2605942361857,18.279177457493,66.7344615914781,64.5902763833012,48.4449434617787,31.547678887156,18.5711661310454,18.6413862287708,52.7385167997865,44.4199644093201,60.766219339048,0.832988126665025,0.906858721281426,0,0,0,0,0,0,1.82577746171277,0,0,0,8.87313544593087,0,0,0,0,0.506719730950197,0,0.91347103775248,0,2.3750742250372,2.25530924795977,4.87144765299426,2.7673859670727,3.46662073271032,2.3517741427141,0.753999547978053,0,0.144599356919912,0,0.161766849947409,0,0,0,141.413124956577,163.577878021308,0,0,0,0,18.574039286198,17.3850229071078,49.3821603803557,17.9039049798045,25.0601148183724,17.0386196538839,17.8465389374533,0.81471491080253,0,0,1.26265113531884,0.910843100738926,4.13823787980251,6.84236093260327,7.83665052745718,9.25296388458059,7.94305065766069,8.52685693493532,7.24369438069244,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0.268273401399619,0,0,0,0,0,0,0.134206418760372,21.0289948564127,45.6896478964023,0,0,0,0.232236671860439,1.15980715189884,0.80673409849337,1.55664630691409,1.33157938278791,0,0.658795818896044,0.502670417600539,0.397912944082302,0.58489226135736,0,0,0.199141273254367,0,0.799739588268102,0,0,0,0.0701358198903186,0.189709611372772,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502518772325447,0.476087281772027,0.585400943573396,0,0,0,0,0.172684981865896,0,0,0,0,0,13.8073507389501,16.7612711826851,0.327869890753351,0,4.73262329124385,1.95219372148319,4.52389135238878,1.19484398976276,2.89638276307112,1.98153571552183,3.64329631507405,3.79932615284705,5.13874111330481,26.3483479465882,0,0.35613120733451,0.488660878060728,0,0,0.971122544619926,0.906970670894253,0.188605079755898,0.590603785761546,0.922305443831782,1.55056975900933,1.45413491791002,2.13898427030833,1.26414703174326,0,0,2.04263763452273,1.62054984628179,1.55230420539305,1.71469628025274,2.30542303734956,5.88617098086833,5.43011767986999,10.0473433207818,0,0,0.220528398054962,0,0.161464426695906,0,0,0,0,12.4234952347041,0,0.206386867963223,0,0,0,0,0,0,0,0,0.158167996790568,0.609958401380546,0.540026704109006,1.04544148007234,0.655087691238533,0.539457385539283,1.32245529160537,0,0.388844919875379,0,0.56369293868419,0,0,0,0.258319646955462,0.844780627453891,0.821500670520278,0.13020438484395,0,0,0.864090018773596,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0.443971906748129,0,0.167884616364078,0,0,0,0,0.501572104035363,31.0613513439387,28.540164663445,23.4887160510153,38.6669660273297,21.2375581128899,24.9279986138601,18.2256075062588,20.7147753483141,17.2194115413998,22.7814537170801,2.07574695168353,6.3843979744165,6.31714341290296,8.265628380322,7.1268475293514,7.90527086335061,5.778414922842,5.76898160268904,7.70206103020357,5.81203587056734,7.60437899670719,6.22466926574051,6.27398100048212,8.45132011744274,6.4902079919843,8.57328644309533,7.06894388263618,6.94473193669338,3.70877310722976,7.21274708658547,5.82877729055206,4.79184676630211,7.15308569841963,6.68593516508711,6.58765662907314,7.78454392603424,6.0366231048015,4.99832451731901,7.87663860305998,5.61142271657738,7.3553711236988,7.38783617816726,7.7753898202241,6.04253680625267,6.55882477335881,28.2285953069879,6.78401664491684,6.66100267549725,4.3996316375834,0,0.695603506861264
|short_description=p1@Mmp24
|short_description=p1@Mmp24
}}
}}

Latest revision as of 23:43, 25 September 2015

Short description:p1@Mmp24
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Mmp24_5end
Coexpression cluster:MCL_coexpression_mm9:367
Association with transcript: 0bp_to_ENSMUST00000029141, NM_010808, uc008nlj.1_5end
EntrezGene:Mmp24
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Mmp24

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G719.06
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A38.93
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.76
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.91
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.70
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C360.69
Mouse Granule cells, donor2.CNhs12357.11731-123E366.12
Mouse Granule cells, donor3.CNhs12108.11636-122C750.07
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.80
Mouse Microglia, donor2.CNhs12634.11736-123E82.31
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D531.42
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F534.02
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D934.91
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F145.13
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D539.54
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D229.89
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F222.52
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D626.66
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D316.52
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F324.26
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D718.28
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D466.73
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F464.59
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D848.44
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E431.55
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E518.57
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I618.64
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D652.74
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F644.42
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E160.77
Mouse Schwann, donor1.CNhs12507.11728-123D90.83
Mouse Schwann, donor2.CNhs12573.11746-123F90.91
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.83
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G68.87
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.91
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D72.38
adrenal gland, embryo E14.CNhs11038.406-44C52.26
adrenal gland, embryo E16.CNhs11004.1254-43D64.87
adrenal gland, embryo E17.CNhs11043.1263-45I12.77
adrenal gland, embryo E18.CNhs11026.1262-18F53.47
adrenal gland, neonate N00.CNhs11191.1311-23C12.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.75
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B2141.41
cerebellum, neonate N30.CNhs11135.1395-42I2163.58
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A418.57
corpus striatum, adult.CNhs10487.19-21D817.39
corpus striatum, neonate N00.CNhs11226.630-43F149.38
cortex, adult.CNhs10473.12-14D517.90
cortex, neonate N30.CNhs11107.1392-42F225.06
diencephalon, adult.CNhs10482.20-12F217.04
diencephalon, neonate N30.CNhs11201.1388-42B217.85
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.81
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G41.26
eyeball, embryo E12.CNhs11016.345-16C60.91
eyeball, embryo E14.CNhs10521.399-16E24.14
eyeball, embryo E15.CNhs10593.426-16C96.84
eyeball, embryo E17.CNhs11023.1261-18D47.84
eyeball, neonate N00.CNhs11207.633-15C69.25
eyeball, neonate N01.CNhs11140.1532-43E77.94
eyeball, neonate N02.CNhs11205.1551-44G88.53
eyeball, neonate N16.CNhs11188.777-19A27.24
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E821.03
hippocampus, neonate N00.CNhs11228.627-43G145.69
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D81.16
intestine, embryo E16.CNhs10585.463-22H40.81
intestine, embryo E17.CNhs10582.482-18D31.56
intestine, embryo E18.CNhs10526.1289-20F71.33
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.66
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.80
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.19
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C213.81
medulla oblongata, neonate N30.CNhs11200.1396-42A316.76
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.33
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E14.73
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.95
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E34.52
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.19
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.90
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.98
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D43.64
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D53.80
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D65.14
olfactory brain, adult.CNhs10489.18-22I926.35
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.97
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G91.55
pancreas, neonate N01.CNhs11138.1531-43D71.45
pancreas, neonate N02.CNhs11139.1539-43D82.14
pancreas, neonate N16.CNhs11136.787-43B61.26
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G82.04
pituitary gland, embryo E12.CNhs11018.346-16E61.62
pituitary gland, embryo E13.CNhs11009.370-44C71.55
pituitary gland, embryo E14.CNhs11037.398-44A51.71
pituitary gland, embryo E15.CNhs10592.427-16B92.31
pituitary gland, embryo E16.CNhs11036.449-43F65.89
pituitary gland, embryo E17.CNhs11039.1265-44F55.43
pituitary gland, neonate N00.CNhs11190.1308-22E910.05
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C912.42
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.54
stomach, embryo E17.CNhs11006.1035-18D51.05
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B80.54
stomach, neonate N07.CNhs11210.718-18A91.32
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.84
testis, neonate N00.CNhs11189.1300-22B70.82
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A131.06
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A228.54
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A323.49
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D738.67
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A421.24
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A524.93
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A618.23
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A720.71
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A817.22
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A922.78
whole body, embryo E11.CNhs11014.324-5I82.08
whole body, embryo E12.CNhs10587.857-27C96.38
whole body, embryo E13.CNhs10512.372-23H26.32
whole body, embryo E14.5.CNhs10578.420-27D28.27
whole body, embryo E14.CNhs10519.395-14B17.13
whole body, embryo E16.CNhs10514.453-14F27.91
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G55.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G55.77
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G57.70
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G55.81
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G57.60
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G56.22
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G56.27
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G58.45
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G56.49
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G58.57
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G57.07
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G56.94
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G57.21
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G55.83
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G54.79
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G57.15
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G56.69
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G56.59
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G57.78
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G56.04
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G55.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G57.88
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G55.61
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G57.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G57.39
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G57.78
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G56.04
whole body, embryo E17.5.CNhs10513.490-9F96.56
whole body, embryo E17.CNhs10517.475-3I528.23
whole body, embryo E18.CNhs10516.493-3B36.78
whole body, neonate N00.CNhs10525.657-19C26.66
whole body, neonate N01.CNhs10576.659-23C64.40
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron7.41e-2233
neuronal stem cell7.41e-2233
neuroblast7.41e-2233
electrically signaling cell7.41e-2233
CNS neuron (sensu Vertebrata)3.05e-2023
neuroblast (sensu Vertebrata)3.05e-2023
electrically responsive cell2.00e-1639
electrically active cell2.00e-1639
ectodermal cell6.38e-1644
neurectodermal cell6.38e-1644
neural cell2.29e-1543

Uber anatomy
Ontology termp-valuen
central nervous system4.34e-3873
nervous system2.33e-3675
neurectoderm6.77e-3464
neural plate6.77e-3464
presumptive neural plate6.77e-3464
ectoderm-derived structure2.72e-3395
ectoderm2.72e-3395
presumptive ectoderm2.72e-3395
regional part of nervous system9.36e-3254
neural tube3.79e-3052
neural rod3.79e-3052
future spinal cord3.79e-3052
neural keel3.79e-3052
ecto-epithelium1.23e-2973
pre-chordal neural plate5.58e-2649
brain1.46e-2547
future brain1.46e-2547
regional part of brain9.69e-2546
gray matter2.34e-2434
structure with developmental contribution from neural crest1.92e-2392
anterior neural tube2.44e-2340
regional part of forebrain1.28e-2239
forebrain1.28e-2239
future forebrain1.28e-2239
brain grey matter1.02e-1929
regional part of telencephalon1.02e-1929
telencephalon1.02e-1929
cerebral cortex3.26e-1321
cerebral hemisphere3.26e-1321
pallium3.26e-1321
regional part of cerebral cortex3.51e-1017
occipital lobe1.44e-0810
visual cortex1.44e-0810
neocortex1.44e-0810
basal ganglion8.54e-088
nuclear complex of neuraxis8.54e-088
aggregate regional part of brain8.54e-088
collection of basal ganglia8.54e-088
cerebral subcortex8.54e-088
posterior neural tube3.34e-0712
chordal neural plate3.34e-0712
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr2:155601069..155601128,%2B&oldid=4220999"