Personal tools

FFCP PHASE1:Mm9::chr19:55201670..55201733,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
(Created page with "{{FFCP |id=chr19:55201670..55201733,- |short_description=p2@Gpam |description=CAGE_peak_2_at_Gpam_5end |association_with_transcript=0bp_to_uc008hxl.1,uc012bnm.1_5end |Ent...")
 
No edit summary
 
(8 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr19:55201670..55201733,-
|DHSsupport=NA
|short_description=p2@Gpam
|DPIdataset=NA
|description=CAGE_peak_2_at_Gpam_5end
|association_with_transcript=0bp_to_uc008hxl.1,uc012bnm.1_5end
|EntrezGene=14732
|EntrezGene=14732
|HGNC=
|HGNC=
|MCL_coexpression_id=715
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=0bp_to_uc008hxl.1,uc012bnm.1_5end
|cluster_id=chr19:55201670..55201733,-
|description=CAGE_peak_2_at_Gpam_5end
|id=chr19:55201670..55201733,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0009854!3.69e-15!23;UBERON:0009856!3.69e-15!23;UBERON:0002107!4.36e-15!22;UBERON:0007499!4.36e-15!22;UBERON:0006925!4.36e-15!22;UBERON:0009497!4.36e-15!22;UBERON:0000015!4.36e-15!22;UBERON:0002423!4.36e-15!22;UBERON:0006235!4.36e-15!22;UBERON:0008835!4.36e-15!22;UBERON:0003894!4.36e-15!22;UBERON:0004161!4.36e-15!22;UBERON:0008836!4.36e-15!22;UBERON:0002365!1.15e-14!25;UBERON:0002330!1.15e-14!25;UBERON:0009569!1.61e-12!66;UBERON:0005172!2.89e-12!49;UBERON:0005173!2.89e-12!49;UBERON:0002417!2.89e-12!49;UBERON:0000916!2.89e-12!49;UBERON:0005177!2.70e-11!85;UBERON:0002100!4.42e-08!98;UBERON:0000468!5.93e-08!333;UBERON:0005256!6.04e-08!47;UBERON:0000466!2.00e-07!79
|ontology_enrichment_uberon_v019_2=UBERON:0009854,2.15e-16,23;UBERON:0009856,2.15e-16,23;UBERON:0002107,2.58e-16,22;UBERON:0007499,2.58e-16,22;UBERON:0006925,2.58e-16,22;UBERON:0009497,2.58e-16,22;UBERON:0000015,2.58e-16,22;UBERON:0002423,2.58e-16,22;UBERON:0006235,2.58e-16,22;UBERON:0008835,2.58e-16,22;UBERON:0003894,2.58e-16,22;UBERON:0004161,2.58e-16,22;UBERON:0008836,2.58e-16,22;UBERON:0002365,7.42e-16,25;UBERON:0002330,7.42e-16,25;UBERON:0005177,2.76e-12,79;UBERON:0009569,5.56e-12,66;UBERON:0005172,1.55e-11,49;UBERON:0005173,1.55e-11,49;UBERON:0002417,1.55e-11,49;UBERON:0000916,1.55e-11,49;UBERON:0002100,6.30e-08,90;UBERON:0005256,1.20e-07,45;UBERON:0003104,3.68e-07,61;UBERON:0009142,3.68e-07,61
|phase1_expression=1.60148847104794,0.348975407639361,0,0,0,0.671517087647559,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42438965179803,13.436839843869,0,0,3.19984845586813,4.12936705920906,0,0.430761996159075,0,0.380046838912748,0.756090389279792,0.443461021310609,0,0,0,0,0.332469290716985,0,0,0,0,0,0,0,0.503587271902309,0.304130793658544,0.367093504323363,0,1.52617609466313,1.97717564461025,2.91644848611425,1.81982348112971,1.43752564364972,0,0,0,0,0.286533439938757,0.515672092277442,0,0,0,0,0.889294796111139,0,0,0,7.19040265244171,7.30014780110954,0,0,0,0.285650984403804,0.220868540951614,0,0.0958454710182364,0,12.1127469099328,5.10749352340751,7.21950706304344,0,0.0914876436024097,0.52091337055676,0.279182999001381,7.31591393041184,12.071061574368,0.589257170947335,0.284743361598206,0.372798891650601,0,1.058001841495,20.0006497204158,79.1589966822876,155.713435419075,251.501687303223,265.758554736097,141.576496322758,84.5475409193146,0,0,0,2.81686839553361,0,0,0,0,0,0,75.0188089754224,33.144049106838,8.75808620482466,6.24547176358089,17.0500667854799,19.602317266765,7.83757730873637,3.05730638552832,42.60097446076,142.384301414999,10.9895511259133,0,0.161766849947409,0,0,11.1835056730873,0,0,0.766371165625774,0,0,0,3.14560342750128,14.1825186873774,1.13088916901578,13.0368240144207,15.0872119824895,5.40248915854856,11.0324058886075,0.509196819251581,1.99051152976149,6.82351447770922,1.05220927943237,0.130120442962704,0,0,4.37043971723574,0.136072998302656,0.2562274405697,0,2.32833033665114,0,1.51284864134255,0.351902248327898,0,0,0.348252166522167,0,1.99034266818493,0,0,0,1.03562886267751,2.11073453982987,0,0,0.393528463494808,0.462801338662135,0.232533944750408,0.804820204198858,0.116765342367169,0.329119699826961,0,0.0810688095458557,0,15.8076083009556,2.01309628140558,21.0289948564127,0.102904612379284,0.330418782983798,15.073682299822,1.91959425481711,9.75394021813842,21.5208660407896,45.5804765648754,65.156766846547,49.8391140414905,1.89811624617805,5.59976446061637,2.76468729680296,2.38747766449381,2.14460495831032,0.898819408654221,2.37751854862164,1.99141273254367,3.98302592001472,6.39791670614481,7.88954149711563,5.49858585182348,3.49114476901726,2.31448205638051,1.83385957660346,5.75679577120448,25.2767951824613,27.8877590463269,239.533722686416,34.7037819889476,43.8326559102443,51.4934237361315,79.9268878270701,156.765153839071,180.020477209464,223.53989879928,63.2327384422638,74.4061429739701,58.9449646762154,74.8003304813692,65.8399490271723,176.047477929137,368.841082201051,84.4276162385893,50.0681145351499,0.189491411770485,0.488894929326078,0,0.704070744865506,18.2581820611579,68.794612216058,37.6607940365552,19.7043930132739,15.2810635857655,17.0616602463511,40.9658286789345,42.998560484608,32.4013891222586,0,0,20.6540994667995,4.69092468718045,2.24770825982909,3.5163505977661,0,0.504941854408746,8.20321370482267,7.80877488593277,35.5448606259118,18.161628644394,27.1814382380521,25.4768877709949,6.47697122679831,18.9966307642353,20.9502522311657,23.7777774152137,21.0071326108238,1.95872164033981,0.325773918707152,5.60898418106621,2.65490276679926,4.37005145078967,1.51161778482376,3.20628635585027,1.77181135728464,2.76691633149535,2.32585463851399,3.27180356529755,1.78248689192361,4.74055136903724,1.05418608574999,6.18813259489121,0,0,0,0.214337035031592,0,0.535106452806212,0.493647061806363,0.608929898229199,3.98941903708308,3.1774810629573,0.882113592219848,9.39851641766436,0.322928853391811,5.06628569396509,5.84924485615369,5.74493149107714,1.45740418314925,3.33765543618917,1.02522528478712,0.412773735926445,0.925972636848558,0.376736914009382,0.683471138605126,0.915112692826091,0,0,0,1.90934123603023,0.632671987162271,1.82987520414164,6.58832579012988,2.09088296014469,7.20596460362386,11.1937407499401,16.3653842336165,8.89970202745701,8.16574331738295,1.24267862617385,0,4.78452947340732,2.64733584731356,0.388902376688095,0.904118764344118,1.18269287843545,0,0.781226309063701,0.209718688851422,0.241584120826006,0.288030006257865,0.948033361884535,0.810900861160657,0.205421914329655,0.129920822977795,0,0.198681354781265,0,0,0.201932899896295,0.15241361331,0.302478555410522,0.194915761479505,1.05833025804362,0.350630706544707,0.453460767230423,0,0,0,22.9895616898307,2.064507229963,2.19781949120718,0.643105137237198,0,5.0827665835536,3.68260189205742,6.87474616127276,10.3111909406213,11.6464028361009,10.5755145634558,7.42524750254986,8.55610286126019,10.8754178156209,2.07104124700728,0.207574695168353,3.99024873401031,6.82934423016537,14.3432963070293,13.2056292455629,18.3843508450014,22.6691662357648,22.4578212390395,27.2781328153043,19.7103825175762,21.5457404906704,23.9555453560317,23.2230938525308,22.4728284941091,20.8490752308876,19.0517476513229,17.7303018695629,19.4838312668342,21.8405527425753,20.3134509785468,24.0008476669791,23.7817580253512,18.3595866259437,25.7263157439221,23.4332357234173,23.1844025623194,21.0367168803688,22.3609254722166,19.8274006214958,17.9565526930476,18.6256978454953,19.5038875103616,15.9600106836179,22.4658419719651,19.8693809310576,0.499621155875892,28.5396562303398,10.3138105943183,0.382576664137687,1.54413993383661,0.695603506861264
|phase1_expression=1.60148847104794,0.348975407639361,0,0,0,0.671517087647559,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42438965179803,13.436839843869,0,0,3.19984845586813,4.12936705920906,0,0.430761996159075,0,0.380046838912748,0.756090389279792,0.443461021310609,0,0,0,0,0.332469290716985,0,0,0,0,0,0,0,0.503587271902309,0.304130793658544,0.367093504323363,0,1.52617609466313,1.97717564461025,2.91644848611425,1.81982348112971,1.43752564364972,0,0,0,0,0.286533439938757,0.515672092277442,0,0,0,0,0.889294796111139,0,0,0,7.19040265244171,7.30014780110954,0,0,0,0.285650984403804,0.220868540951614,0,0.0958454710182364,0,12.1127469099328,5.10749352340751,7.21950706304344,0,0.0914876436024097,0.52091337055676,0.279182999001381,7.31591393041184,12.071061574368,0.589257170947335,0.284743361598206,0.372798891650601,0,1.058001841495,20.0006497204158,79.1589966822876,155.713435419075,251.501687303223,265.758554736097,141.576496322758,84.5475409193146,0,0,0,2.81686839553361,0,0,0,0,0,0,75.0188089754224,33.144049106838,8.75808620482466,6.24547176358089,17.0500667854799,19.602317266765,7.83757730873637,3.05730638552832,42.60097446076,142.384301414999,10.9895511259133,0,0.161766849947409,0,0,11.1835056730873,0,0,0.766371165625774,0,0,0,3.14560342750128,14.1825186873774,1.13088916901578,13.0368240144207,15.0872119824895,5.40248915854856,11.0324058886075,0.509196819251581,1.99051152976149,6.82351447770922,1.05220927943237,0.130120442962704,0,0,4.37043971723574,0.136072998302656,0.2562274405697,0,2.32833033665114,0,1.51284864134255,0.351902248327898,0,0,0.348252166522167,0,1.99034266818493,0,0,0,1.03562886267751,2.11073453982987,0,0,0.393528463494808,0.462801338662135,0.232533944750408,0.804820204198858,0.116765342367169,0.329119699826961,0,0.0810688095458557,0,15.8076083009556,2.01309628140558,21.0289948564127,0.102904612379284,0.330418782983798,15.073682299822,1.91959425481711,9.75394021813842,21.5208660407896,45.5804765648754,65.156766846547,49.8391140414905,1.89811624617805,5.59976446061637,2.76468729680296,2.38747766449381,2.14460495831032,0.898819408654221,2.37751854862164,1.99141273254367,3.98302592001472,6.39791670614481,7.88954149711563,5.49858585182348,3.49114476901726,2.31448205638051,1.83385957660346,5.75679577120448,25.2767951824613,27.8877590463269,239.533722686416,34.7037819889476,43.8326559102443,51.4934237361315,79.9268878270701,156.765153839071,180.020477209464,223.53989879928,63.2327384422638,74.4061429739701,58.9449646762154,74.8003304813692,65.8399490271723,176.047477929137,368.841082201051,84.4276162385893,50.0681145351499,0.189491411770485,0.488894929326078,0,0.704070744865506,18.2581820611579,68.794612216058,37.6607940365552,19.7043930132739,15.2810635857655,17.0616602463511,40.9658286789345,42.998560484608,32.4013891222586,0,0,20.6540994667995,4.69092468718045,2.24770825982909,3.5163505977661,0,0.504941854408746,8.20321370482267,7.80877488593277,35.5448606259118,18.161628644394,27.1814382380521,25.4768877709949,6.47697122679831,18.9966307642353,20.9502522311657,23.7777774152137,21.0071326108238,1.95872164033981,0.325773918707152,5.60898418106621,2.65490276679926,4.37005145078967,1.51161778482376,3.20628635585027,1.77181135728464,2.76691633149535,2.32585463851399,3.27180356529755,1.78248689192361,4.74055136903724,1.05418608574999,6.18813259489121,0,0,0,0.214337035031592,0,0.535106452806212,0.493647061806363,0.608929898229199,3.98941903708308,3.1774810629573,0.882113592219848,9.39851641766436,0.322928853391811,5.06628569396509,5.84924485615369,5.74493149107714,1.45740418314925,3.33765543618917,1.02522528478712,0.412773735926445,0.925972636848558,0.376736914009382,0.683471138605126,0.915112692826091,0,0,0,1.90934123603023,0.632671987162271,1.82987520414164,6.58832579012988,2.09088296014469,7.20596460362386,11.1937407499401,16.3653842336165,8.89970202745701,8.16574331738295,1.24267862617385,0,4.78452947340732,2.64733584731356,0.388902376688095,0.904118764344118,1.18269287843545,0,0.781226309063701,0.209718688851422,0.241584120826006,0.288030006257865,0.948033361884535,0.810900861160657,0.205421914329655,0.129920822977795,0,0.198681354781265,0,0,0.201932899896295,0.15241361331,0.302478555410522,0.194915761479505,1.05833025804362,0.350630706544707,0.453460767230423,0,0,0,22.9895616898307,2.064507229963,2.19781949120718,0.643105137237198,0,5.0827665835536,3.68260189205742,6.87474616127276,10.3111909406213,11.6464028361009,10.5755145634558,7.42524750254986,8.55610286126019,10.8754178156209,2.07104124700728,0.207574695168353,3.99024873401031,6.82934423016537,14.3432963070293,13.2056292455629,18.3843508450014,22.6691662357648,22.4578212390395,27.2781328153043,19.7103825175762,21.5457404906704,23.9555453560317,23.2230938525308,22.4728284941091,20.8490752308876,19.0517476513229,17.7303018695629,19.4838312668342,21.8405527425753,20.3134509785468,24.0008476669791,23.7817580253512,18.3595866259437,25.7263157439221,23.4332357234173,23.1844025623194,21.0367168803688,22.3609254722166,19.8274006214958,17.9565526930476,18.6256978454953,19.5038875103616,15.9600106836179,22.4658419719651,19.8693809310576,0.499621155875892,28.5396562303398,10.3138105943183,0.382576664137687,1.54413993383661,0.695603506861264
|short_description=p2@Gpam
}}
}}

Latest revision as of 23:40, 25 September 2015

Short description:p2@Gpam
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Gpam_5end
Coexpression cluster:MCL_coexpression_mm9:715
Association with transcript: 0bp_to_uc008hxl.1, uc012bnm.1_5end
EntrezGene:Gpam
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Gpam

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.60
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.67
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A313.44
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D13.20
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D24.13
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.38
Ileum epithelium, pool2.CNhs13232.10253-104C10.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.50
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.30
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.53
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.98
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.92
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.82
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C87.19
Mouse Microglia, donor2.CNhs12634.11736-123E87.30
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D312.11
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F35.11
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D77.22
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.09
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E57.32
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I612.07
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.37
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F91.06
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G320.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F779.16
Mouse hepatocyte, donor1.CNhs13078.11714-123C4155.71
Mouse hepatocyte, donor3.CNhs12615.11637-122C8251.50
Mouse hepatocyte, donor6.CNhs13090.11822-124F4265.76
Mouse hepatocyte, donor8.CNhs13091.11824-124F6141.58
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A784.55
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.82
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B675.02
accessory axillary lymph node, adult.CNhs10475.1063-29H933.14
adrenal gland, adult.CNhs10508.49-24D78.76
adrenal gland, embryo E14.CNhs11038.406-44C56.25
adrenal gland, embryo E16.CNhs11004.1254-43D617.05
adrenal gland, embryo E17.CNhs11043.1263-45I119.60
adrenal gland, embryo E18.CNhs11026.1262-18F57.84
adrenal gland, neonate N00.CNhs11191.1311-23C13.06
adrenal gland, neonate N25.CNhs11223.1377-27I342.60
amnion, adult pregnant day17.5.CNhs10488.583-22A8142.38
aorta, adult.CNhs10498.46-23H110.99
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H411.18
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A43.15
corpus striatum, adult.CNhs10487.19-21D814.18
corpus striatum, neonate N00.CNhs11226.630-43F11.13
cortex, adult.CNhs10473.12-14D513.04
cortex, neonate N30.CNhs11107.1392-42F215.09
diencephalon, adult.CNhs10482.20-12F25.40
diencephalon, neonate N30.CNhs11201.1388-42B211.03
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.51
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.99
epididymis, adult.CNhs10490.58-23B26.82
eyeball, adult.CNhs10484.31-12G41.05
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D44.37
eyeball, neonate N00.CNhs11207.633-15C60.14
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A22.33
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H21.51
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I61.99
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E91.04
heart, embryo E12.CNhs11015.353-12F52.11
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.80
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D315.81
heart, neonate N30.CNhs11202.1390-42D22.01
hippocampus, adult.CNhs10478.13-16E821.03
hippocampus, neonate N00.CNhs11228.627-43G10.10
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A315.07
intestine, embryo E12.CNhs11019.1251-16I51.92
intestine, embryo E13.CNhs11010.381-16D59.75
intestine, embryo E15.CNhs10602.976-16D821.52
intestine, embryo E16.CNhs10585.463-22H445.58
intestine, embryo E17.CNhs10582.482-18D365.16
intestine, embryo E18.CNhs10526.1289-20F749.84
intestine, neonate N00.CNhs11126.644-26D11.90
intestine, neonate N01.CNhs11192.1322-23E95.60
intestine, neonate N06.CNhs11102.688-20B82.76
intestine, neonate N07.CNhs11095.720-20F22.39
intestine, neonate N10.CNhs11098.755-23A52.14
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E32.38
intestine, neonate N30.CNhs11131.1384-42G11.99
kidney, embryo E14.CNhs10606.411-4I93.98
kidney, embryo E15.CNhs10997.434-16F86.40
kidney, embryo E16.CNhs10584.464-22A57.89
kidney, embryo E17.CNhs11028.483-18I25.50
kidney, embryo E18.CNhs11001.1288-20C73.49
kidney, neonate N00.CNhs11214.646-21G72.31
kidney, neonate N10.CNhs11206.758-6D51.83
kidney, neonate N20.CNhs11113.832-19I15.76
kidney, neonate N25.CNhs11122.1353-25F325.28
kidney, neonate N30.CNhs11203.1385-42H127.89
liver, adult pregnant day01.CNhs10466.508-5B2239.53
liver, embryo E12.CNhs10601.355-15F834.70
liver, embryo E13.CNhs10524.378-3H643.83
liver, embryo E14.CNhs10594.409-16E151.49
liver, embryo E15.CNhs10520.433-16D779.93
liver, embryo E16.CNhs10523.462-17F5156.77
liver, embryo E17.CNhs10510.481-18A3180.02
liver, embryo E18.CNhs10579.499-43G4223.54
liver, neonate N00.CNhs11117.641-24F463.23
liver, neonate N03.CNhs11123.1345-25G274.41
liver, neonate N06.CNhs11101.684-20A858.94
liver, neonate N07.CNhs11103.716-20H274.80
liver, neonate N10.CNhs11115.751-24B965.84
liver, neonate N20.CNhs11220.823-25A3176.05
liver, neonate N25.CNhs11198.1368-26H1368.84
liver, neonate N30.CNhs11106.1382-42D184.43
lung, adult.CNhs10474.28-22B150.07
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A618.26
lung, embryo E18.CNhs10583.1287-20I668.79
lung, neonate N00.CNhs11224.640-42C637.66
lung, neonate N06.CNhs11212.683-20E519.70
lung, neonate N07.CNhs11111.715-19A315.28
lung, neonate N10.CNhs11219.750-23E617.06
lung, neonate N20.CNhs11109.822-18A440.97
lung, neonate N25.CNhs11119.1359-25C743.00
lung, neonate N30.CNhs11133.1394-42H232.40
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B620.65
mammary gland, adult pregnant day19.CNhs10476.588-5H24.69
medulla oblongata, adult.CNhs10477.17-12C22.25
medulla oblongata, neonate N30.CNhs11200.1396-42A33.52
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E18.20
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E27.81
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E335.54
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D718.16
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D827.18
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D925.48
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D46.48
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D519.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D620.95
olfactory brain, adult.CNhs10489.18-22I923.78
ovary, adult.CNhs10507.91-2I721.01
ovary, embryo E18.CNhs11040.505-44H71.96
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G65.61
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F44.37
pancreas, embryo E15.CNhs11042.1556-45F21.51
pancreas, embryo E16.CNhs11003.460-26E53.21
pancreas, embryo E17.CNhs10599.1558-45G31.77
pancreas, embryo E18.CNhs10580.1535-43I72.77
pancreas, neonate N00.CNhs11105.645-26G92.33
pancreas, neonate N01.CNhs11138.1531-43D73.27
pancreas, neonate N02.CNhs11139.1539-43D81.78
pancreas, neonate N16.CNhs11136.787-43B64.74
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H56.19
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I73.99
placenta, adult pregnant day17.CNhs10464.577-18G33.18
prostate, adult.CNhs10470.859-1F80.88
skin, adult.CNhs10492.30-1C39.40
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H35.07
skin, neonate N06.CNhs11097.693-20I55.85
skin, neonate N10.CNhs11108.762-6C45.74
small intestine, neonate N16.CNhs11114.790-21I11.46
spinal cord, adult.CNhs10505.24-13C93.34
spleen, adult.CNhs10465.25-2G21.03
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.93
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.68
spleen, neonate N25.CNhs11099.1354-25G30.92
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E30.63
stomach, embryo E15.CNhs10603.1252-16G81.83
stomach, embryo E16.CNhs11022.459-17D46.59
stomach, embryo E17.CNhs11006.1035-18D52.09
stomach, embryo E18.CNhs10999.1286-20C67.21
stomach, neonate N03.CNhs11193.1340-24B811.19
stomach, neonate N07.CNhs11210.718-18A916.37
stomach, neonate N25.CNhs11104.1355-25E48.90
stomach, neonate N30.CNhs11134.1386-42I18.17
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F54.78
testis, embryo E15.CNhs11034.443-27C52.65
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.90
testis, embryo E18.CNhs11027.503-18G51.18
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.78
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.95
thymus, embryo E14.CNhs11041.402-44I40.81
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.30
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G71.06
thymus, neonate N30.CNhs11132.1393-42G20.35
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E422.99
uterus, adult pregnant day19.CNhs10497.590-15F52.06
uterus, adult.CNhs10509.92-27E52.20
vagina, adult.CNhs10502.89-27D50.64
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A15.08
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.68
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A36.87
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D710.31
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A411.65
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A510.58
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A67.43
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A78.56
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A810.88
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.07
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C93.99
whole body, embryo E13.CNhs10512.372-23H26.83
whole body, embryo E14.5.CNhs10578.420-27D214.34
whole body, embryo E14.CNhs10519.395-14B113.21
whole body, embryo E16.CNhs10514.453-14F218.38
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G522.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G522.46
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G527.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G519.71
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G521.55
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G523.96
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G523.22
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G522.47
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G520.85
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G519.05
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G517.73
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G519.48
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G521.84
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G520.31
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G524.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G523.78
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G518.36
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G525.73
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G523.43
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G523.18
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G521.04
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G522.36
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G519.83
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G517.96
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G518.63
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G519.50
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G515.96
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G522.47
whole body, embryo E17.5.CNhs10513.490-9F919.87
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B328.54
whole body, neonate N00.CNhs10525.657-19C210.31
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D11.54
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
digestive tract diverticulum2.15e-1623
sac2.15e-1623
liver2.58e-1622
epithelial sac2.58e-1622
digestive gland2.58e-1622
epithelium of foregut-midgut junction2.58e-1622
anatomical boundary2.58e-1622
hepatobiliary system2.58e-1622
foregut-midgut junction2.58e-1622
hepatic diverticulum2.58e-1622
liver primordium2.58e-1622
septum transversum2.58e-1622
liver bud2.58e-1622
exocrine gland7.42e-1625
exocrine system7.42e-1625
trunk region element2.76e-1279
subdivision of trunk5.56e-1266
abdomen element1.55e-1149
abdominal segment element1.55e-1149
abdominal segment of trunk1.55e-1149
abdomen1.55e-1149
trunk6.30e-0890
trunk mesenchyme1.20e-0745
mesenchyme3.68e-0761
entire embryonic mesenchyme3.68e-0761
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr19:55201670..55201733,-&oldid=4220883"