FFCP PHASE1:Mm9::chr11:93905555..93905587,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=70834 | |EntrezGene=70834 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q58A65 | |UniProt=Q58A65 | ||
|association_with_transcript=0bp_to_ENSMUST00000103168_5end | |association_with_transcript=0bp_to_ENSMUST00000103168_5end | ||
|cluster_id=chr11:93905555..93905587,+ | |||
|description=CAGE_peak_3_at_Spag9_5end | |description=CAGE_peak_3_at_Spag9_5end | ||
|id=chr11:93905555..93905587,+ | |id=chr11:93905555..93905587,+ | ||
|ontology_enrichment_celltype=CL:0000540!4.19e-16!33;CL:0000047!4.19e-16!33;CL:0000031!4.19e-16!33;CL:0000404!4.19e-16!33;CL:0000117!3.11e-13!23;CL:0000337!3.11e-13!23;CL:0000221!1.39e-11!44;CL:0000133!1.39e-11!44;CL:0002319!3.37e-11!43;CL:0000393!1.91e-10!39;CL:0000211!1.91e-10!39;CL:0000055!6.55e-07!50 | |ontology_enrichment_celltype=CL:0000540!4.19e-16!33;CL:0000047!4.19e-16!33;CL:0000031!4.19e-16!33;CL:0000404!4.19e-16!33;CL:0000117!3.11e-13!23;CL:0000337!3.11e-13!23;CL:0000221!1.39e-11!44;CL:0000133!1.39e-11!44;CL:0002319!3.37e-11!43;CL:0000393!1.91e-10!39;CL:0000211!1.91e-10!39;CL:0000055!6.55e-07!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,8.90e-17,33;CL:0000047,8.90e-17,33;CL:0000031,8.90e-17,33;CL:0000404,8.90e-17,33;CL:0000117,8.98e-14,23;CL:0000337,8.98e-14,23;CL:0000221,1.25e-11,44;CL:0000133,1.25e-11,44;CL:0000393,2.84e-11,39;CL:0000211,2.84e-11,39;CL:0002319,3.14e-11,43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!3.33e-28!102;UBERON:0000924!3.33e-28!102;UBERON:0006601!3.33e-28!102;UBERON:0001017!1.68e-27!73;UBERON:0005743!1.68e-27!73;UBERON:0000073!7.92e-27!75;UBERON:0001016!7.92e-27!75;UBERON:0002346!9.18e-26!71;UBERON:0003075!9.18e-26!71;UBERON:0007284!9.18e-26!71;UBERON:0000033!6.19e-23!63;UBERON:0001049!5.57e-21!52;UBERON:0005068!5.57e-21!52;UBERON:0006241!5.57e-21!52;UBERON:0007135!5.57e-21!52;UBERON:0000955!4.18e-20!50;UBERON:0006238!4.18e-20!50;UBERON:0003056!1.11e-19!49;UBERON:0002616!1.65e-19!49;UBERON:0002020!2.41e-17!34;UBERON:0003080!3.02e-16!40;UBERON:0002780!1.10e-15!39;UBERON:0001890!1.10e-15!39;UBERON:0006240!1.10e-15!39;UBERON:0002791!1.34e-14!29;UBERON:0003528!1.34e-14!29;UBERON:0001893!1.34e-14!29;UBERON:0000956!1.15e-10!21;UBERON:0001869!1.15e-10!21;UBERON:0000203!1.15e-10!21;UBERON:0000153!1.75e-10!94;UBERON:0007811!2.84e-10!86;UBERON:0000468!8.91e-10!333;UBERON:0002619!1.50e-08!17;UBERON:0002021!5.08e-08!10;UBERON:0000411!5.08e-08!10;UBERON:0001950!5.08e-08!10;UBERON:0000922!8.42e-07!328 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.68e-28,73;UBERON:0004121,1.27e-27,95;UBERON:0000924,1.27e-27,95;UBERON:0006601,1.27e-27,95;UBERON:0001016,1.82e-27,75;UBERON:0002346,5.61e-27,64;UBERON:0003075,5.61e-27,64;UBERON:0007284,5.61e-27,64;UBERON:0010314,3.51e-25,92;UBERON:0010371,2.13e-24,73;UBERON:0000073,3.13e-23,54;UBERON:0001049,9.75e-22,52;UBERON:0005068,9.75e-22,52;UBERON:0006241,9.75e-22,52;UBERON:0007135,9.75e-22,52;UBERON:0003056,3.11e-20,49;UBERON:0000955,1.20e-18,47;UBERON:0006238,1.20e-18,47;UBERON:0002616,4.87e-18,46;UBERON:0002020,9.22e-18,34;UBERON:0003080,1.21e-16,40;UBERON:0002780,4.63e-16,39;UBERON:0001890,4.63e-16,39;UBERON:0006240,4.63e-16,39;UBERON:0003528,6.76e-15,29;UBERON:0002791,6.76e-15,29;UBERON:0001893,6.76e-15,29;UBERON:0000956,8.63e-11,21;UBERON:0001869,8.63e-11,21;UBERON:0000203,8.63e-11,21;UBERON:0002619,1.39e-08,17;UBERON:0002021,2.55e-08,10;UBERON:0000411,2.55e-08,10;UBERON:0001950,2.55e-08,10 | |||
|phase1_expression=7.04654927261093,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,10.3752813984305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.39827672018491,0,0.972149495371417,1.1198913730029,2.87505128729943,0.167782606057736,0,0,0.257259436035947,0,0,26.7057728334669,33.8554226734101,23.4517619297286,0,0,0,0,0,0.898800331555214,2.30530983192933,44.27546445572,35.9115795962297,31.3384192413559,15.7108041422092,26.7250934551452,39.6870189456451,32.5874601462004,44.122501757281,70.4741638396088,47.4996897676898,61.2890067692411,28.8830970129125,29.5505088835783,31.7757156039624,29.8725808931478,37.7050948721226,40.3387374130779,58.6310885092599,54.6707254268555,36.5342913817589,2.42323818666189,1.43585964202892,0.289864488701678,0,0,0.539703191637817,0,0,2.38755514223978,0,0,0,16.6195235336483,0,0,0,0,0,0,1.59857431606684,0.258937883647172,2.22663208597237,6.07198643681475,10.9607572192371,4.61230994512117,7.83757730873637,9.52468527799209,1.13099932196708,0.741584903203122,2.74738778147832,0,5.01477234836968,2.42925670306433,1.45462575940567,1.86391761218122,47.1377083188591,49.2199761011619,0.510914110417183,0,0,0,40.2936819998973,36.1425476226715,30.2826988592003,44.6728502894151,43.4716277461562,42.8043371792694,37.9644555578553,5.19380755636613,1.61729061793121,0.505445516867349,5.47148825304832,8.71806967850115,15.6333431014762,24.1283253939168,27.8803912996073,26.4661981698665,46.2490530228308,31.2963760029494,14.4873887613849,1.94011193639558,6.61871280587367,8.62160508403349,3.94552318369635,6.39508673218875,8.00979983000983,4.7329891373827,5.37392520409932,0,0,0,2.69263504296152,4.92504725960302,5.22179978236943,8.52281048106757,6.68998387941173,7.55908853148153,5.8133486187602,3.21928081679543,6.30532848782715,2.96207729844265,9.85004784474571,7.78260571640215,4.67839959761063,4.17145219052996,4.83143107537338,31.9640721817473,44.6606017726094,0,0.528901133327089,5.54549451391608,7.19933682767359,5.92790322081629,4.03367049246685,4.00280478920767,2.85338439168839,0.949058123089023,1.64698954724011,1.25667604400135,1.98956472041151,2.14460495831032,0,0.648414149624083,0.597423819763102,1.32767530667157,5.82667414309617,2.25415471346161,3.46207257337034,5.43066964069352,3.29638353484497,2.33975187359752,0.442830443938806,0.470996183524124,0.370191491765402,0,0.500535317148282,0.196558995113203,0,0.608580364165509,0,0,0.575392274901621,0,0,1.43768206527355,0,0.624075346229121,0,0,0,0.923765950833023,3.41084541186873,4.07412441105065,4.92260748748046,5.63256595892405,6.03022526790537,3.80869825417622,1.75620283072019,3.31033802623001,4.87222317227305,1.11618338060241,0.81931657357869,0.690739927463582,0.578596234326046,0,0,0.983528546038072,0.827810238914197,51.697289976069,50.5182369212396,0,7.06918596172244,14.1978698737316,12.8844785617891,26.0662311256687,9.31978312014953,12.4767257486141,16.9845918473299,11.334699646897,19.2888866221466,20.5549644532192,40.8078071855695,2.83880170416537,1.6025904330053,3.90928702448583,2.63952196756057,0,3.8844901784797,2.11626489875326,3.96070667487386,0.295301892880773,3.68922177532713,2.06742634534577,1.81766864738753,0.712994756769443,0.632073515871632,1.05418608574999,1.03135543248187,7.48967132658334,11.1637878299412,2.8458910432206,4.50107773566344,10.995094485821,9.45354733290974,9.70839221552514,3.04464949114599,0.938686832254841,0.42366414172764,0.441056796109924,1.97863503529776,5.00539722757307,3.19658502119226,1.55184047204077,1.96969079694074,0.874442509889552,59.7069472473841,0,4.12773735926445,2.77791791054568,0.188368457004691,0,0,0.169978429993855,0,0.138199973804424,0,5.3777118908793,6.30290348093231,3.56417624711944,3.13632444021703,3.05707589244649,0.809186078308924,2.14898984885873,0.523511883968059,0.518459893167171,0,0,8.67195967055077,5.29467169462712,8.5558522871381,6.32883135040882,11.9958849098453,10.2100797621806,8.59348939970071,10.3810750981454,0.966336483304024,2.88030006257865,0,1.82452693761148,1.54066435747241,1.68897069871134,1.25318686967237,1.39076948346885,0.480781798079875,0.295379054349154,1.00966449948148,0.228620419965,0.302478555410522,0.0974578807397524,0,0,2.49403421976732,0,0,0,0.965947970160952,0.750729901804728,1.28206136987086,0.428736758158132,0,57.6046879469408,63.0645574014832,74.4764167471216,71.490923854974,43.1601987455505,52.1221789198893,51.9767325178491,62.1443260449424,60.7210828038834,46.5984280576638,16.5021882658841,23.1434426572598,15.3660245178721,12.1553358534147,11.528723944539,5.51530525350042,11.3345831178824,14.0103838922448,12.8367683836726,11.1186773176071,11.1530891951705,11.6948331659367,10.2069243142172,11.7806280424959,10.5106908188772,6.66811167796303,8.69132444586416,10.6100071255038,9.89006161927936,12.3647092912894,12.0004238334895,11.7134032065163,11.6833733074187,14.2439488299682,13.3635320189769,11.3383574574847,11.3415343181119,11.8381370147029,12.6297825876651,9.53941861818155,7.94854621431967,12.1160513321943,8.18462086339379,11.0005157242036,10.4169569929816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| ||
|short_description=p3@Spag9 | |short_description=p3@Spag9 | ||
}} | }} |
Latest revision as of 23:33, 25 September 2015
Short description: | p3@Spag9 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Spag9_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000103168_5end |
EntrezGene: | Spag9 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 8.90e-17 | 33 |
neuronal stem cell | 8.90e-17 | 33 |
neuroblast | 8.90e-17 | 33 |
electrically signaling cell | 8.90e-17 | 33 |
CNS neuron (sensu Vertebrata) | 8.98e-14 | 23 |
neuroblast (sensu Vertebrata) | 8.98e-14 | 23 |
ectodermal cell | 1.25e-11 | 44 |
neurectodermal cell | 1.25e-11 | 44 |
electrically responsive cell | 2.84e-11 | 39 |
electrically active cell | 2.84e-11 | 39 |
neural cell | 3.14e-11 | 43 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 3.68e-28 | 73 |
ectoderm-derived structure | 1.27e-27 | 95 |
ectoderm | 1.27e-27 | 95 |
presumptive ectoderm | 1.27e-27 | 95 |
nervous system | 1.82e-27 | 75 |
neurectoderm | 5.61e-27 | 64 |
neural plate | 5.61e-27 | 64 |
presumptive neural plate | 5.61e-27 | 64 |
structure with developmental contribution from neural crest | 3.51e-25 | 92 |
ecto-epithelium | 2.13e-24 | 73 |
regional part of nervous system | 3.13e-23 | 54 |
neural tube | 9.75e-22 | 52 |
neural rod | 9.75e-22 | 52 |
future spinal cord | 9.75e-22 | 52 |
neural keel | 9.75e-22 | 52 |
pre-chordal neural plate | 3.11e-20 | 49 |
brain | 1.20e-18 | 47 |
future brain | 1.20e-18 | 47 |
regional part of brain | 4.87e-18 | 46 |
gray matter | 9.22e-18 | 34 |
anterior neural tube | 1.21e-16 | 40 |
regional part of forebrain | 4.63e-16 | 39 |
forebrain | 4.63e-16 | 39 |
future forebrain | 4.63e-16 | 39 |
brain grey matter | 6.76e-15 | 29 |
regional part of telencephalon | 6.76e-15 | 29 |
telencephalon | 6.76e-15 | 29 |
cerebral cortex | 8.63e-11 | 21 |
cerebral hemisphere | 8.63e-11 | 21 |
pallium | 8.63e-11 | 21 |
regional part of cerebral cortex | 1.39e-08 | 17 |
occipital lobe | 2.55e-08 | 10 |
visual cortex | 2.55e-08 | 10 |
neocortex | 2.55e-08 | 10 |