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FFCP PHASE1:Mm9::chr19:5457504..5457573,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=240514
|EntrezGene=240514
|HGNC=
|HGNC=
|MCL_coexpression_id=347
|TSSclassifier=NA
|UniProt=Q6PDY0
|UniProt=Q6PDY0
|association_with_transcript=0bp_to_ENSMUST00000053754,NM_001243307,NM_198616,uc008gdd.2,uc012bgx.1_5end
|association_with_transcript=0bp_to_ENSMUST00000053754,NM_001243307,NM_198616,uc008gdd.2,uc012bgx.1_5end
|cluster_id=chr19:5457504..5457573,-
|description=CAGE_peak_1_at_Ccdc85b_5end
|description=CAGE_peak_1_at_Ccdc85b_5end
|id=chr19:5457504..5457573,-
|id=chr19:5457504..5457573,-
|ontology_enrichment_celltype=CL:0000055!1.96e-09!50;CL:0000117!2.74e-09!23;CL:0000337!2.74e-09!23;CL:0000221!4.92e-08!44;CL:0000133!4.92e-08!44;CL:0002319!8.30e-08!43;CL:0000393!3.39e-07!39;CL:0000211!3.39e-07!39
|ontology_enrichment_celltype=CL:0000055!1.96e-09!50;CL:0000117!2.74e-09!23;CL:0000337!2.74e-09!23;CL:0000221!4.92e-08!44;CL:0000133!4.92e-08!44;CL:0002319!8.30e-08!43;CL:0000393!3.39e-07!39;CL:0000211!3.39e-07!39
|ontology_enrichment_celltype_v019_2=CL:0000117,2.74e-09,23;CL:0000337,2.74e-09,23;CL:0000221,4.92e-08,44;CL:0000133,4.92e-08,44;CL:0002319,8.30e-08,43;CL:0000393,3.39e-07,39;CL:0000211,3.39e-07,39
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!4.59e-21!73;UBERON:0005743!4.59e-21!73;UBERON:0001049!1.39e-19!52;UBERON:0005068!1.39e-19!52;UBERON:0006241!1.39e-19!52;UBERON:0007135!1.39e-19!52;UBERON:0000073!2.39e-19!75;UBERON:0001016!2.39e-19!75;UBERON:0000955!9.68e-19!50;UBERON:0006238!9.68e-19!50;UBERON:0002616!2.78e-18!49;UBERON:0004111!3.02e-16!122;UBERON:0000033!1.24e-15!63;UBERON:0000025!2.04e-15!114;UBERON:0002020!3.25e-15!34;UBERON:0004121!1.06e-13!102;UBERON:0000924!1.06e-13!102;UBERON:0006601!1.06e-13!102;UBERON:0003080!3.22e-13!40;UBERON:0002346!3.23e-13!71;UBERON:0003075!3.23e-13!71;UBERON:0007284!3.23e-13!71;UBERON:0002791!9.64e-13!29;UBERON:0003528!9.64e-13!29;UBERON:0001893!9.64e-13!29;UBERON:0002780!1.10e-12!39;UBERON:0001890!1.10e-12!39;UBERON:0006240!1.10e-12!39;UBERON:0003056!2.11e-10!49;UBERON:0007811!1.08e-09!86;UBERON:0000477!1.97e-09!154;UBERON:0000956!2.19e-09!21;UBERON:0001869!2.19e-09!21;UBERON:0000203!2.19e-09!21;UBERON:0002619!1.02e-08!17;UBERON:0000153!1.39e-07!94;UBERON:0002021!2.38e-07!10;UBERON:0000411!2.38e-07!10;UBERON:0001950!2.38e-07!10;UBERON:0003076!2.39e-07!12;UBERON:0003057!2.39e-07!12
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.59e-21,73;UBERON:0000073,6.32e-21,54;UBERON:0001049,1.39e-19,52;UBERON:0005068,1.39e-19,52;UBERON:0006241,1.39e-19,52;UBERON:0007135,1.39e-19,52;UBERON:0001016,2.39e-19,75;UBERON:0010314,4.64e-17,92;UBERON:0000955,8.14e-17,47;UBERON:0006238,8.14e-17,47;UBERON:0002616,2.28e-16,46;UBERON:0004111,3.02e-16,122;UBERON:0000025,2.04e-15,114;UBERON:0002020,3.25e-15,34;UBERON:0004121,8.82e-15,95;UBERON:0000924,8.82e-15,95;UBERON:0006601,8.82e-15,95;UBERON:0002346,8.82e-15,64;UBERON:0003075,8.82e-15,64;UBERON:0007284,8.82e-15,64;UBERON:0010371,1.45e-13,73;UBERON:0003080,3.22e-13,40;UBERON:0003528,9.64e-13,29;UBERON:0002791,9.64e-13,29;UBERON:0001893,9.64e-13,29;UBERON:0002780,1.10e-12,39;UBERON:0001890,1.10e-12,39;UBERON:0006240,1.10e-12,39;UBERON:0003056,2.11e-10,49;UBERON:0000956,2.19e-09,21;UBERON:0001869,2.19e-09,21;UBERON:0000203,2.19e-09,21;UBERON:0002619,1.02e-08,17;UBERON:0002021,2.38e-07,10;UBERON:0000411,2.38e-07,10;UBERON:0001950,2.38e-07,10;UBERON:0003076,2.39e-07,12;UBERON:0003057,2.39e-07,12
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33534,36.3941846157059,47.6303553024144,57.7083696999934,62.0149681039144,57.7219402527033,53.5594393100177,47.9013373830774,43.2914010794588,38.5230374113894,7.89170114157866,30.6508919390157,34.7462829959905,36.751274597025,45.2059382172059,42.2390313726945,34.3856709232059,38.6707022986532,44.5652213809271,14.9782154912124,15.8416503441826,36.6572899928687,33.2469353075869,39.235585636964,33.7794139742267,26.3169242631198,31.1929727006586,33.7749213151112,29.2425263805663,25.8474111867258,27.4344503957999,24.8032415436628,36.8390789196264,25.399926193047,29.2192255453922,42.1718513524293,22.8645531975287,29.9644281075649,26.6936540018885,56.797740645464,95.1550150537493,60.9894908809993,34.5133090317296,58.1823640681022,153.047749349225,139.018221425167,151.81731106144,157.761221391505,182.231950258991,149.567991683161,147.154905050534,136.897645780163,155.880988690566,161.541217266568,44.5247721136118,42.2966365805093,41.8297334097629,32.8194068042197,41.5034062003405,56.6238006026043,42.4491250101085,42.6492568484511,39.7939819893851,39.6734622469162,45.3727946803529,39.9887843738482,35.7710558534951,34.6376074510343,30.7279758912531,31.9116773159659,36.0400253688501,32.022930596975,34.2031297666745,37.5357246342713,39.4299640243228,34.9627338133895,39.8188437212026,42.4411536566399,41.2199086219148,40.3611679643297,42.0734337607377,40.24966584999,41.5560588368337,42.0856703743304,41.4036213253368,40.1898288092299,31.1015592808964,34.5509155844704,39.9316684730963,52.2104107890307,35.7915360921475,38.4619186746454,43.8050280437651,48.7507036254129,50.5471881652519
|phase1_expression=60.2159665114025,6.97950815278722,14.5599756604652,4.23449895829562,2.50447864973174,18.1309613664841,18.9226238882376,53.9735491985789,26.3274910423617,32.0668401061131,26.7100030431788,27.8404834893724,46.7377992712192,53.0641842683314,24.3170126125434,14.5782192520675,13.2916756844348,25.3947043113381,24.5434836154272,24.6145998042858,41.9263420444774,34.3546691155063,32.1275740640891,11.5194544411253,13.0763290208287,14.9300310669905,7.32295393470427,9.48073423817912,8.7410772949932,8.82105454159758,12.8603696180077,57.7877912848264,59.6612843957033,63.3926724061755,19.6419101430867,23.9377889316229,21.4377824075488,5.02237956884289,7.813353445238,6.28228492768558,2.94115744015507,2.73218193983378,4.85510353031154,83.3436934998322,79.8850218009775,73.4187008646726,221.416750450495,96.3671191201574,111.600580829112,130.656892177918,87.7714863591023,119.314628422926,16.7782606057736,43.5217285206807,39.9951620979532,61.9995240846632,51.5760191889762,57.2396022427961,72.429292987736,81.4646108078931,88.1025650873589,166.711509778013,141.397872581671,71.9919773825119,74.1649771925231,80.9947331038554,121.038444649436,204.404138431067,46.452946314198,54.6774050243347,53.8431901059538,149.681115827593,144.227157241404,45.9340497056078,44.4722985524617,59.7492211296514,227.939873668735,136.880826427321,163.437351384643,63.0416455350327,65.1392022449157,63.030517837368,224.742314196112,172.768121279726,142.713563423541,96.9328046208367,97.9517163897828,76.6101722341985,7.72407171998477,28.188191919831,97.3944682037637,45.6024654800135,23.1190253460635,21.0484244738749,21.4426217757731,22.4013443548668,38.3413266959683,126.459299352919,184.448063268037,202.816915768935,58.7317060468758,85.9787398675929,86.6337815002595,149.3240076622,28.5768174134803,22.0423082963336,29.3204178108574,28.7743376892031,22.7865337609511,49.5796744476515,41.8099637506387,35.9269264408327,31.363707626824,36.6256016542873,30.2202977338761,42.3496412781006,20.0227923864843,52.0557684911682,26.5383165584962,29.4415666904285,26.7218237337076,24.2437626567611,44.7340226923493,117.40509960163,80.8464288299937,24.5238773000248,13.539109069169,41.9931911695385,17.9169020173021,140.803201040533,159.667710383701,52.1465561268387,146.186253281704,138.597777873039,133.607712651797,116.326985619582,52.5491117467632,29.2356380933719,42.4574234168574,36.1959992124735,38.7758920028857,49.8887566620636,33.6716182736003,30.5930780206502,29.8680231274329,31.9003163509276,35.7940587818164,58.4669617870175,31.9040629540606,30.0678667466833,30.967397852855,46.2502995422183,31.9754336609438,27.163668988729,27.1632420058485,43.58850443325,48.4527099246132,24.1907032687832,20.1756084570871,46.1890472754169,58.1624628753119,43.9351429964876,38.8261366359745,53.9133994987886,50.2910788012853,47.4369247290832,51.2402196673273,56.7479563904444,43.9374799268993,58.607784676237,73.1240662103619,70.4683939390102,59.4980812438747,68.4452735677896,146.361804200633,57.3178690952614,10.9038198384653,15.3381328664856,49.269585873639,40.1769442318559,35.5674193248978,28.0340099226446,36.2476211467139,37.4744483441741,26.0990983849481,38.3748564506945,42.9783207048461,50.5349438984523,40.552530120777,31.4586793028978,22.2622191370935,23.4986702440153,63.3490789183293,44.7854169430137,38.3206301288473,41.7485222082894,55.0825063556057,38.2240218402236,43.3802644672405,40.5927906943906,30.143755745544,30.7258938165283,39.724652029678,21.8567088488083,29.4838492669804,19.3381416650974,19.4745716532963,16.6412240229168,22.4070749567649,25.3172600956713,14.9164408633033,17.2973690308491,18.6898668485561,30.8876986564858,29.3315412727687,31.8249386213361,23.1422663443267,22.1924019827149,96.0716588866344,53.0575952957357,40.4153141576224,53.6394471049595,59.376632816991,50.7543960048702,70.6989613431461,52.4909512737479,73.1427068652726,80.6131470321541,68.7250052913769,95.8600391087067,74.2545422023351,66.9725141232399,27.142431109069,23.9318500880232,50.6517201209607,41.6664486920146,159.747837037853,118.735438517902,109.672478456996,50.9991272952833,29.3422644057119,32.7968545209176,33.8214734440494,24.3748173911603,34.7565931568535,34.5353367562376,34.408909642366,40.331308391761,37.9476266828663,89.6486472816842,49.8209699081023,68.9113886192278,49.19186172478,96.1775816929882,41.1509928853885,36.4170954232472,42.0229744181004,32.8172838775263,46.3623971822813,43.6557910080377,32.0451083528594,39.6251765130481,32.4412614330096,42.0328888054635,46.3841877729995,48.4737053266478,39.1505546616856,33.8514856778863,57.6939729671085,45.6537884617292,38.1281502330888,49.4081624757735,46.4028238097981,58.7617351791177,41.5368923272767,34.9522916925303,45.2083216012672,43.0353120177263,29.3865256586548,27.6836325420235,34.0211180408939,35.6185752446783,28.8566028263552,150.194494628513,21.8714727421251,50.7711695189527,40.9279905487063,26.183215523652,22.0077706630851,20.3612574153805,18.1876920093425,19.1733489683411,17.4131966993574,62.0535901709824,51.0882629633534,36.3941846157059,47.6303553024144,57.7083696999934,62.0149681039144,57.7219402527033,53.5594393100177,47.9013373830774,43.2914010794588,38.5230374113894,7.89170114157866,30.6508919390157,34.7462829959905,36.751274597025,45.2059382172059,42.2390313726945,34.3856709232059,38.6707022986532,44.5652213809271,14.9782154912124,15.8416503441826,36.6572899928687,33.2469353075869,39.235585636964,33.7794139742267,26.3169242631198,31.1929727006586,33.7749213151112,29.2425263805663,25.8474111867258,27.4344503957999,24.8032415436628,36.8390789196264,25.399926193047,29.2192255453922,42.1718513524293,22.8645531975287,29.9644281075649,26.6936540018885,56.797740645464,95.1550150537493,60.9894908809993,34.5133090317296,58.1823640681022,153.047749349225,139.018221425167,151.81731106144,157.761221391505,182.231950258991,149.567991683161,147.154905050534,136.897645780163,155.880988690566,161.541217266568,44.5247721136118,42.2966365805093,41.8297334097629,32.8194068042197,41.5034062003405,56.6238006026043,42.4491250101085,42.6492568484511,39.7939819893851,39.6734622469162,45.3727946803529,39.9887843738482,35.7710558534951,34.6376074510343,30.7279758912531,31.9116773159659,36.0400253688501,32.022930596975,34.2031297666745,37.5357246342713,39.4299640243228,34.9627338133895,39.8188437212026,42.4411536566399,41.2199086219148,40.3611679643297,42.0734337607377,40.24966584999,41.5560588368337,42.0856703743304,41.4036213253368,40.1898288092299,31.1015592808964,34.5509155844704,39.9316684730963,52.2104107890307,35.7915360921475,38.4619186746454,43.8050280437651,48.7507036254129,50.5471881652519
|short_description=p1@Ccdc85b
|short_description=p1@Ccdc85b
}}
}}

Latest revision as of 23:32, 25 September 2015

Short description:p1@Ccdc85b
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Ccdc85b_5end
Coexpression cluster:MCL_coexpression_mm9:347
Association with transcript: 0bp_to_ENSMUST00000053754, NM_001243307, NM_198616, uc008gdd.2, uc012bgx.1_5end
EntrezGene:Ccdc85b
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p1@Ccdc85b

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G760.22
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I56.98
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I614.56
CD326+ enterocyte, pool1.CNhs13542.11848-124I34.23
CD326+ enterocyte, pool2.CNhs13197.11849-124I42.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I718.13
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I818.92
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E953.97
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E726.33
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F232.07
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E626.71
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F127.84
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E446.74
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E853.06
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A124.32
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A314.58
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A513.29
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A225.39
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A424.54
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A624.61
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A341.93
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H234.35
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I932.13
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D111.52
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D213.08
GP2+ M cell, pool1.CNhs13228.11845-124H914.93
GP2+ M cell, pool2.CNhs13231.11846-124I17.32
GP2+ M cell, pool3.CNhs13240.11847-124I29.48
Ileum epithelium, pool1.CNhs13199.10252-104B98.74
Ileum epithelium, pool2.CNhs13232.10253-104C18.82
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C812.86
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I357.79
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G659.66
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E963.39
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F519.64
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F623.94
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F721.44
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G85.02
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H17.81
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H36.28
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G92.94
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H22.73
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H44.86
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D883.34
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D979.89
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B373.42
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B7221.42
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C296.37
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B8111.60
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C3130.66
Mouse Astrocytes, donor2.CNhs12078.11552-120C487.77
Mouse Astrocytes, donor3.CNhs12107.11633-122C4119.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A216.78
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I943.52
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A140.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C162.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E151.58
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C557.24
Mouse Granule cells, donor1.CNhs12131.11713-123C372.43
Mouse Granule cells, donor2.CNhs12357.11731-123E381.46
Mouse Granule cells, donor3.CNhs12108.11636-122C788.10
Mouse Meningeal cells, donor1.CNhs12132.11716-123C6166.71
Mouse Meningeal cells, donor3.CNhs12109.11639-122D1141.40
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C771.99
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E774.16
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D280.99
Mouse Microglia, donor1.CNhs12629.11718-123C8121.04
Mouse Microglia, donor2.CNhs12634.11736-123E8204.40
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D546.45
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F554.68
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D953.84
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1149.68
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D5144.23
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D245.93
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F244.47
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D659.75
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3227.94
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3136.88
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7163.44
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D463.04
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F465.14
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D863.03
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4224.74
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5172.77
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6142.71
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D696.93
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F697.95
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E176.61
Mouse Schwann, donor1.CNhs12507.11728-123D97.72
Mouse Schwann, donor2.CNhs12573.11746-123F928.19
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G397.39
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F745.60
Mouse hepatocyte, donor1.CNhs13078.11714-123C423.12
Mouse hepatocyte, donor3.CNhs12615.11637-122C821.05
Mouse hepatocyte, donor6.CNhs13090.11822-124F421.44
Mouse hepatocyte, donor8.CNhs13091.11824-124F622.40
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A738.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I7126.46
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E3184.45
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I8202.82
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G658.73
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H185.98
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I886.63
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B6149.32
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G128.58
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G222.04
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G329.32
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B628.77
accessory axillary lymph node, adult.CNhs10475.1063-29H922.79
adrenal gland, adult.CNhs10508.49-24D749.58
adrenal gland, embryo E14.CNhs11038.406-44C541.81
adrenal gland, embryo E16.CNhs11004.1254-43D635.93
adrenal gland, embryo E17.CNhs11043.1263-45I131.36
adrenal gland, embryo E18.CNhs11026.1262-18F536.63
adrenal gland, neonate N00.CNhs11191.1311-23C130.22
adrenal gland, neonate N25.CNhs11223.1377-27I342.35
amnion, adult pregnant day17.5.CNhs10488.583-22A820.02
aorta, adult.CNhs10498.46-23H152.06
bone (os femoris), adult.CNhs10483.56-12G226.54
bone (os femoris), neonate N02.CNhs11227.1985-43F529.44
bone (os femoris), neonate N16.CNhs11225.1525-43A626.72
bone (os femoris), neonate N20.CNhs11195.1350-25C324.24
cecum, adult.CNhs10467.37-13H444.73
cerebellum, adult.CNhs10494.15-8B2117.41
cerebellum, neonate N30.CNhs11135.1395-42I280.85
colon, adult.CNhs10468.36-18H724.52
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C713.54
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D141.99
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D417.92
corpora quadrigemina, adult.CNhs10501.16-22A4140.80
corpus striatum, adult.CNhs10487.19-21D8159.67
corpus striatum, neonate N00.CNhs11226.630-43F152.15
cortex, adult.CNhs10473.12-14D5146.19
cortex, neonate N30.CNhs11107.1392-42F2138.60
diencephalon, adult.CNhs10482.20-12F2133.61
diencephalon, neonate N30.CNhs11201.1388-42B2116.33
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B152.55
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A229.24
epididymis, adult.CNhs10490.58-23B242.46
eyeball, adult.CNhs10484.31-12G436.20
eyeball, embryo E12.CNhs11016.345-16C638.78
eyeball, embryo E14.CNhs10521.399-16E249.89
eyeball, embryo E15.CNhs10593.426-16C933.67
eyeball, embryo E17.CNhs11023.1261-18D430.59
eyeball, neonate N00.CNhs11207.633-15C629.87
eyeball, neonate N01.CNhs11140.1532-43E731.90
eyeball, neonate N02.CNhs11205.1551-44G835.79
eyeball, neonate N16.CNhs11188.777-19A258.47
forelimb, embryo E11.CNhs10596.335-25E231.90
forelimb, embryo E12.CNhs10600.359-14H230.07
forelimb, embryo E13.CNhs10589.384-1E230.97
forelimb, embryo E14.CNhs10577.413-26A846.25
forelimb, embryo E15.CNhs11007.437-20E731.98
forelimb, embryo E17.CNhs10598.1517-43C427.16
forelimb, embryo E18.CNhs11008.1520-43B527.16
gonad, embryo E13.CNhs11044.1564-45I643.59
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C848.45
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D224.19
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D520.18
heart, embryo E11.CNhs10586.331-24E946.19
heart, embryo E12.CNhs11015.353-12F558.16
heart, embryo E13.CNhs11013.376-3I943.94
heart, embryo E14.CNhs10597.403-26D438.83
heart, embryo E15.CNhs11017.431-16C853.91
heart, embryo E16.CNhs11021.457-17C650.29
heart, embryo E17.CNhs11025.479-18E547.44
heart, embryo E18.CNhs11030.1283-20G351.24
heart, neonate N00.CNhs11213.639-21E356.75
heart, neonate N03.CNhs11221.1349-25I243.94
heart, neonate N10.CNhs11118.749-24G158.61
heart, neonate N16.CNhs11209.782-15G173.12
heart, neonate N20.CNhs11127.821-26I670.47
heart, neonate N25.CNhs11196.1351-25D359.50
heart, neonate N30.CNhs11202.1390-42D268.45
hippocampus, adult.CNhs10478.13-16E8146.36
hippocampus, neonate N00.CNhs11228.627-43G157.32
intestinal mucosa, adult.CNhs10506.860-29I310.90
intestine, adult.CNhs10496.178-9A315.34
intestine, embryo E12.CNhs11019.1251-16I549.27
intestine, embryo E13.CNhs11010.381-16D540.18
intestine, embryo E15.CNhs10602.976-16D835.57
intestine, embryo E16.CNhs10585.463-22H428.03
intestine, embryo E17.CNhs10582.482-18D336.25
intestine, embryo E18.CNhs10526.1289-20F737.47
intestine, neonate N00.CNhs11126.644-26D126.10
intestine, neonate N01.CNhs11192.1322-23E938.37
intestine, neonate N06.CNhs11102.688-20B842.98
intestine, neonate N07.CNhs11095.720-20F250.53
intestine, neonate N10.CNhs11098.755-23A540.55
intestine, neonate N20.CNhs11187.827-18D131.46
intestine, neonate N25.CNhs11121.1352-25E322.26
intestine, neonate N30.CNhs11131.1384-42G123.50
kidney, embryo E14.CNhs10606.411-4I963.35
kidney, embryo E15.CNhs10997.434-16F844.79
kidney, embryo E16.CNhs10584.464-22A538.32
kidney, embryo E17.CNhs11028.483-18I241.75
kidney, embryo E18.CNhs11001.1288-20C755.08
kidney, neonate N00.CNhs11214.646-21G738.22
kidney, neonate N10.CNhs11206.758-6D543.38
kidney, neonate N20.CNhs11113.832-19I140.59
kidney, neonate N25.CNhs11122.1353-25F330.14
kidney, neonate N30.CNhs11203.1385-42H130.73
liver, adult pregnant day01.CNhs10466.508-5B239.72
liver, embryo E12.CNhs10601.355-15F821.86
liver, embryo E13.CNhs10524.378-3H629.48
liver, embryo E14.CNhs10594.409-16E119.34
liver, embryo E15.CNhs10520.433-16D719.47
liver, embryo E16.CNhs10523.462-17F516.64
liver, embryo E17.CNhs10510.481-18A322.41
liver, embryo E18.CNhs10579.499-43G425.32
liver, neonate N00.CNhs11117.641-24F414.92
liver, neonate N03.CNhs11123.1345-25G217.30
liver, neonate N06.CNhs11101.684-20A818.69
liver, neonate N07.CNhs11103.716-20H230.89
liver, neonate N10.CNhs11115.751-24B929.33
liver, neonate N20.CNhs11220.823-25A331.82
liver, neonate N25.CNhs11198.1368-26H123.14
liver, neonate N30.CNhs11106.1382-42D122.19
lung, adult.CNhs10474.28-22B196.07
lung, embryo E12.CNhs10522.354-16G253.06
lung, embryo E14.CNhs10604.404-26F840.42
lung, embryo E15.CNhs11020.432-17C553.64
lung, embryo E16.CNhs10998.458-17B659.38
lung, embryo E17.CNhs10605.480-44A650.75
lung, embryo E18.CNhs10583.1287-20I670.70
lung, neonate N00.CNhs11224.640-42C652.49
lung, neonate N06.CNhs11212.683-20E573.14
lung, neonate N07.CNhs11111.715-19A380.61
lung, neonate N10.CNhs11219.750-23E668.73
lung, neonate N20.CNhs11109.822-18A495.86
lung, neonate N25.CNhs11119.1359-25C774.25
lung, neonate N30.CNhs11133.1394-42H266.97
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A127.14
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A123.93
mammary gland, adult lactating day02.CNhs10480.595-22B650.65
mammary gland, adult pregnant day19.CNhs10476.588-5H241.67
medulla oblongata, adult.CNhs10477.17-12C2159.75
medulla oblongata, neonate N30.CNhs11200.1396-42A3118.74
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C7109.67
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C251.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E129.34
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E232.80
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E333.82
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D724.37
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D834.76
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D934.54
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D434.41
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D540.33
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D637.95
olfactory brain, adult.CNhs10489.18-22I989.65
ovary, adult.CNhs10507.91-2I749.82
ovary, embryo E18.CNhs11040.505-44H768.91
ovary, neonate N00.CNhs11217.1299-22I449.19
oviduct, adult pregnant day01.CNhs10500.988-6G696.18
pancreas, adult.CNhs10486.34-16E441.15
pancreas, embryo E14.CNhs11012.405-44F436.42
pancreas, embryo E15.CNhs11042.1556-45F242.02
pancreas, embryo E16.CNhs11003.460-26E532.82
pancreas, embryo E17.CNhs10599.1558-45G346.36
pancreas, embryo E18.CNhs10580.1535-43I743.66
pancreas, neonate N00.CNhs11105.645-26G932.05
pancreas, neonate N01.CNhs11138.1531-43D739.63
pancreas, neonate N02.CNhs11139.1539-43D832.44
pancreas, neonate N16.CNhs11136.787-43B642.03
pancreas, neonate N25.CNhs11094.1555-45E246.38
pancreas, neonate N30.CNhs11182.1548-44H548.47
pituitary gland, adult.CNhs10493.21-1G839.15
pituitary gland, embryo E12.CNhs11018.346-16E633.85
pituitary gland, embryo E13.CNhs11009.370-44C757.69
pituitary gland, embryo E14.CNhs11037.398-44A545.65
pituitary gland, embryo E15.CNhs10592.427-16B938.13
pituitary gland, embryo E16.CNhs11036.449-43F649.41
pituitary gland, embryo E17.CNhs11039.1265-44F546.40
pituitary gland, neonate N00.CNhs11190.1308-22E958.76
placenta, adult pregnant day10.CNhs10472.539-13I741.54
placenta, adult pregnant day17.CNhs10464.577-18G334.95
prostate, adult.CNhs10470.859-1F845.21
skin, adult.CNhs10492.30-1C343.04
skin, neonate N00.CNhs11124.650-25G429.39
skin, neonate N03.CNhs11215.662-22H327.68
skin, neonate N06.CNhs11097.693-20I534.02
skin, neonate N10.CNhs11108.762-6C435.62
small intestine, neonate N16.CNhs11114.790-21I128.86
spinal cord, adult.CNhs10505.24-13C9150.19
spleen, adult.CNhs10465.25-2G221.87
spleen, embryo E16.CNhs11035.461-43C150.77
spleen, embryo E18.CNhs11011.1271-21F240.93
spleen, neonate N10.CNhs11116.752-24D126.18
spleen, neonate N20.CNhs11112.824-19H122.01
spleen, neonate N25.CNhs11099.1354-25G320.36
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C618.19
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C919.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D317.41
stomach, adult.CNhs10503.33-1H662.05
stomach, embryo E12.CNhs10588.356-43E351.09
stomach, embryo E15.CNhs10603.1252-16G836.39
stomach, embryo E16.CNhs11022.459-17D447.63
stomach, embryo E17.CNhs11006.1035-18D557.71
stomach, embryo E18.CNhs10999.1286-20C662.01
stomach, neonate N03.CNhs11193.1340-24B857.72
stomach, neonate N07.CNhs11210.718-18A953.56
stomach, neonate N25.CNhs11104.1355-25E447.90
stomach, neonate N30.CNhs11134.1386-42I143.29
submandibular gland, adult.CNhs10469.59-29C138.52
testis, adult.CNhs10504.57-7G57.89
testis, embryo E13.CNhs11031.389-23F530.65
testis, embryo E15.CNhs11034.443-27C534.75
testis, embryo E16.CNhs11033.470-26G536.75
testis, embryo E17.CNhs11029.486-18I545.21
testis, embryo E18.CNhs11027.503-18G542.24
testis, neonate N00.CNhs11189.1300-22B734.39
testis, neonate N07.CNhs11222.726-26I438.67
testis, neonate N10.CNhs11204.763-44D944.57
testis, neonate N20.CNhs11110.839-18H314.98
testis, neonate N30.CNhs11130.1391-42E215.84
thymus, adult.CNhs10471.38-12B536.66
thymus, embryo E14.CNhs11041.402-44I433.25
thymus, embryo E15.CNhs11005.430-45I239.24
thymus, embryo E16.CNhs11002.456-26C533.78
thymus, embryo E17.CNhs10581.478-18C126.32
thymus, embryo E18.CNhs10595.1273-19G431.19
thymus, neonate N02.CNhs11181.1541-43F833.77
thymus, neonate N03.CNhs11137.2104-43C729.24
thymus, neonate N06.CNhs11197.681-26C425.85
thymus, neonate N07.CNhs11211.713-19D327.43
thymus, neonate N10.CNhs11194.748-24E424.80
thymus, neonate N20.CNhs11186.820-7A236.84
thymus, neonate N25.CNhs11125.1362-25G725.40
thymus, neonate N30.CNhs11132.1393-42G229.22
tongue, adult.CNhs10499.32-1B442.17
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H322.86
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F729.96
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G526.69
urinary bladder, adult.CNhs10481.879-12E456.80
uterus, adult pregnant day19.CNhs10497.590-15F595.16
uterus, adult.CNhs10509.92-27E560.99
vagina, adult.CNhs10502.89-27D534.51
vesicular gland, adult.CNhs10491.51-27F858.18
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1153.05
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2139.02
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3151.82
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7157.76
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4182.23
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5149.57
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6147.15
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7136.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8155.88
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9161.54
whole body, embryo E11.CNhs11014.324-5I844.52
whole body, embryo E12.CNhs10587.857-27C942.30
whole body, embryo E13.CNhs10512.372-23H241.83
whole body, embryo E14.5.CNhs10578.420-27D232.82
whole body, embryo E14.CNhs10519.395-14B141.50
whole body, embryo E16.CNhs10514.453-14F256.62
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G542.45
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G542.65
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G539.79
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G539.67
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G545.37
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G539.99
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G535.77
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G534.64
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G530.73
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G531.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G536.04
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G532.02
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G534.20
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G537.54
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G539.43
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G534.96
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G539.82
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G542.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G541.22
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G540.36
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G542.07
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G540.25
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G541.56
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G542.09
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G541.40
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G540.19
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G531.10
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G534.55
whole body, embryo E17.5.CNhs10513.490-9F939.93
whole body, embryo E17.CNhs10517.475-3I552.21
whole body, embryo E18.CNhs10516.493-3B335.79
whole body, neonate N00.CNhs10525.657-19C238.46
whole body, neonate N01.CNhs10576.659-23C643.81
whole body, neonate N06.CNhs10515.692-21D148.75
whole body, neonate N10.CNhs10518.761-6B450.55





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.74e-0923
neuroblast (sensu Vertebrata)2.74e-0923
ectodermal cell4.92e-0844
neurectodermal cell4.92e-0844
neural cell8.30e-0843
electrically responsive cell3.39e-0739
electrically active cell3.39e-0739

Uber anatomy
Ontology termp-valuen
central nervous system4.59e-2173
regional part of nervous system6.32e-2154
neural tube1.39e-1952
neural rod1.39e-1952
future spinal cord1.39e-1952
neural keel1.39e-1952
nervous system2.39e-1975
structure with developmental contribution from neural crest4.64e-1792
brain8.14e-1747
future brain8.14e-1747
regional part of brain2.28e-1646
anatomical conduit3.02e-16122
tube2.04e-15114
gray matter3.25e-1534
ectoderm-derived structure8.82e-1595
ectoderm8.82e-1595
presumptive ectoderm8.82e-1595
neurectoderm8.82e-1564
neural plate8.82e-1564
presumptive neural plate8.82e-1564
ecto-epithelium1.45e-1373
anterior neural tube3.22e-1340
brain grey matter9.64e-1329
regional part of telencephalon9.64e-1329
telencephalon9.64e-1329
regional part of forebrain1.10e-1239
forebrain1.10e-1239
future forebrain1.10e-1239
pre-chordal neural plate2.11e-1049
cerebral cortex2.19e-0921
cerebral hemisphere2.19e-0921
pallium2.19e-0921
regional part of cerebral cortex1.02e-0817
occipital lobe2.38e-0710
visual cortex2.38e-0710
neocortex2.38e-0710
posterior neural tube2.39e-0712
chordal neural plate2.39e-0712
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