FFCP PHASE1:Mm9::chr14:45839009..45839020,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=70561 | |EntrezGene=70561 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=18bp_to_ENSMUST00000150648_5end | |||
|cluster_id=chr14:45839009..45839020,- | |||
|description=CAGE_peak_4_at_Txndc16_5end | |||
|id=chr14:45839009..45839020,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000955!4.21e-09!50;UBERON:0006238!4.21e-09!50;UBERON:0002616!6.68e-09!49;UBERON:0000033!9.73e-09!63;UBERON:0000073!1.16e-08!75;UBERON:0001016!1.16e-08!75;UBERON:0004121!1.57e-08!102;UBERON:0000924!1.57e-08!102;UBERON:0006601!1.57e-08!102;UBERON:0001049!3.05e-08!52;UBERON:0005068!3.05e-08!52;UBERON:0006241!3.05e-08!52;UBERON:0007135!3.05e-08!52;UBERON:0002021!4.92e-08!10;UBERON:0000411!4.92e-08!10;UBERON:0001950!4.92e-08!10;UBERON:0001017!7.88e-08!73;UBERON:0005743!7.88e-08!73;UBERON:0003080!1.96e-07!40;UBERON:0002780!6.38e-07!39;UBERON:0001890!6.38e-07!39;UBERON:0006240!6.38e-07!39 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,1.66e-17,10;UBERON:0000411,1.66e-17,10;UBERON:0001950,1.66e-17,10;UBERON:0002619,2.15e-12,17;UBERON:0000956,4.02e-12,21;UBERON:0001869,4.02e-12,21;UBERON:0000203,4.02e-12,21;UBERON:0000073,1.36e-11,54;UBERON:0003080,3.64e-11,40;UBERON:0002616,8.81e-11,46;UBERON:0000955,1.75e-10,47;UBERON:0006238,1.75e-10,47;UBERON:0003528,3.59e-10,29;UBERON:0002791,3.59e-10,29;UBERON:0001893,3.59e-10,29;UBERON:0002780,8.25e-10,39;UBERON:0001890,8.25e-10,39;UBERON:0006240,8.25e-10,39;UBERON:0001016,2.18e-09,75;UBERON:0001049,3.67e-09,52;UBERON:0005068,3.67e-09,52;UBERON:0006241,3.67e-09,52;UBERON:0007135,3.67e-09,52;UBERON:0003056,1.46e-08,49;UBERON:0002020,2.40e-08,34;UBERON:0001017,1.31e-07,73;UBERON:0004121,1.84e-07,95;UBERON:0000924,1.84e-07,95;UBERON:0006601,1.84e-07,95;UBERON:0002346,7.55e-07,64;UBERON:0003075,7.55e-07,64;UBERON:0007284,7.55e-07,64 | |||
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| |phase1_expression=0.480446541314382,0,0,0,0,0,0,0.129123323441576,0,0.234064526321993,0,0.0797721589953364,0,0,0.333109761815663,0.809901069559304,0,1.73504190947031,2.19383093769182,1.27316895539409,0.425216450755349,0.0992909512008853,0.261199789138935,0.319984845586813,0.45881856213434,0,0,0,0,0,0,0,0,0,0,0,0,0.837063261473815,0,0,0,0,0.485510353031154,0.251793635951155,0.101376931219515,0.183546752161682,0,0,0,0,0,0,3.18786951509699,0,0,0,0,0.515672092277442,0.202316460859598,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0,0.883474163806454,0.122490799214954,0.191690942036473,0,4.40463523997555,1.14918604276669,0.46081959976873,0.659431438650969,0.0914876436024097,0,0,0.56276261003168,0.61119299110724,0.589257170947335,0.569486723196412,0,1.06016670666458,1.058001841495,0,0,0,0,0,0,0.421333260395256,0,0,0.35333957451034,1.69012103732017,0,0,0,0,0,0,0.22836775943812,1.8125651855302,0,0,0,0.461230994512117,0.150722640552623,0.352766121407114,0,0.247194967734374,0.289198713839823,0.884610551949874,0,0.220841518460394,0,0,0.585561594023094,0.41889341362691,0,0.239630249011841,0,0.254140454146129,2.09706895166752,5.49000723382352,0.753926112677186,3.12883776346098,3.83573185995496,1.24672826735736,1.46017136760982,0.101839363850316,0.497627882440372,1.76905930903572,0.210441855886474,0,0,0.180062129805349,0.150704817835715,0.136072998302656,0,0.281105173679186,0.258703370739016,0.431135985865684,0.378212160335639,0,0,0,0.348252166522167,0,0.199034266818493,0,0,0,0.207125772535502,0,0,0.23674473558521,0.196764231747404,0.462801338662135,0,0.268273401399619,0,0.16455984991348,0.492502392237286,0,0.146199987425332,0,0.134206418760372,2.73376933133365,0.411618449517138,0,0,0.213288250535234,0,0.38660238396628,0.201683524623343,0,0,0,0.329397909448022,0,0,0,0,0,0.199141273254367,0.189667900953082,0.342745537829186,2.25415471346161,0.407302655690628,0.193952487167626,0.280543279561274,0.126473074248515,0.147610147979602,0.156998727841375,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0.624075346229121,0,0,0,0.184753190166605,0,0.488894929326078,0.339490171550376,0,0,0.238043640886014,0.390267295715598,0,0.221464689648775,0.159454768657487,0,0.172684981865896,0,0,0,0,0.275936746304732,0.160550589987792,1.40654023910644,0.163934945376675,0,0.315508219416257,0,0.215423397732799,0.238968797952552,0.445597348164788,0.566153061577665,0,0.584511715822624,0,0.321321316421807,0.283880170416537,0.35613120733451,0.977321756121456,0.989820737835213,0,0.485561272309963,0,0,0,0.307435147943927,0.516856586336442,0,0,0,0,0,0.340439605753788,0.18006109403131,0.129358683782755,0.214337035031592,0.177340233642274,0.356737635204141,0.493647061806363,0,0,0,0,0.16488625294148,0.645857706783622,0.241251699712623,0.358117032009409,0.328281799490123,0.291480836629851,0.927126510052548,0.170870880797853,0,0.185194527369712,0,0.27338845544205,0.457556346413045,0.849892149969277,0.69975726161829,0.552799895217695,0,0.632671987162271,0,0.324016022465404,0,0.218362563746178,0,0.165306911450672,0,0,0.621339313086926,0,0.149516546043979,0,1.94451188344048,1.03327858782185,1.85851738039856,0.938857909166032,1.3020438484395,1.57289016638566,0,0,0.316011120628178,0,0,0,0.179026695667481,0,0.360586348559907,0.147689527174577,0.100966449948148,0.381034033274999,0.100826185136841,0.487289403698762,0.192423683280659,0.467507608726276,0,0,0,0,0,0.187682475451182,0.183151624267265,0.214368379079066,0,1.12950368523413,2.30162618253588,2.29158205375759,2.749650917499,4.11049511862385,0.755393897389701,0.675022500231806,2.70192721934532,3.17199686288943,2.07104124700728,0.31136204275253,0,0.341467211508268,0,0,0.183843508450014,0,0,0,0,0.50695859978048,0,0.0936415074698824,0.128050304809739,0.0574354689556133,0,0.115884325944855,0.38581844092741,0,0,0,0.70990322463735,0.238436189947321,0.145346416632329,0.282328141245992,0.0846146078916765,0,0,0,0,0,0.197008964751127,0,0,0,0.249810577937946,0.233931608445408,0.429742108096597,0,0.220591419119515,0.231867835620421 | ||
|short_description=p4@Txndc16 | |||
}} | }} |
Latest revision as of 23:27, 25 September 2015
Short description: | p4@Txndc16 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Txndc16_5end |
Coexpression cluster: | NA |
Association with transcript: | 18bp_to_ENSMUST00000150648_5end |
EntrezGene: | Txndc16 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 1.66e-17 | 10 |
visual cortex | 1.66e-17 | 10 |
neocortex | 1.66e-17 | 10 |
regional part of cerebral cortex | 2.15e-12 | 17 |
cerebral cortex | 4.02e-12 | 21 |
cerebral hemisphere | 4.02e-12 | 21 |
pallium | 4.02e-12 | 21 |
regional part of nervous system | 1.36e-11 | 54 |
anterior neural tube | 3.64e-11 | 40 |
regional part of brain | 8.81e-11 | 46 |
brain | 1.75e-10 | 47 |
future brain | 1.75e-10 | 47 |
brain grey matter | 3.59e-10 | 29 |
regional part of telencephalon | 3.59e-10 | 29 |
telencephalon | 3.59e-10 | 29 |
regional part of forebrain | 8.25e-10 | 39 |
forebrain | 8.25e-10 | 39 |
future forebrain | 8.25e-10 | 39 |
nervous system | 2.18e-09 | 75 |
neural tube | 3.67e-09 | 52 |
neural rod | 3.67e-09 | 52 |
future spinal cord | 3.67e-09 | 52 |
neural keel | 3.67e-09 | 52 |
pre-chordal neural plate | 1.46e-08 | 49 |
gray matter | 2.40e-08 | 34 |
central nervous system | 1.31e-07 | 73 |
ectoderm-derived structure | 1.84e-07 | 95 |
ectoderm | 1.84e-07 | 95 |
presumptive ectoderm | 1.84e-07 | 95 |
neurectoderm | 7.55e-07 | 64 |
neural plate | 7.55e-07 | 64 |
presumptive neural plate | 7.55e-07 | 64 |