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FFCP PHASE1:Mm9::chr10:34017238..34017319,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=72480
|EntrezGene=72480
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q8VD63
|UniProt=Q8VD63
|association_with_transcript=11bp_to_ENSMUST00000047935,NM_030203,uc007euu.1_5end
|association_with_transcript=11bp_to_ENSMUST00000047935,NM_030203,uc007euu.1_5end
|cluster_id=chr10:34017238..34017319,+
|description=CAGE_peak_1_at_Tspyl4_5end
|description=CAGE_peak_1_at_Tspyl4_5end
|id=chr10:34017238..34017319,+
|id=chr10:34017238..34017319,+
|ontology_enrichment_celltype=CL:0000540!2.74e-14!33;CL:0000047!2.74e-14!33;CL:0000031!2.74e-14!33;CL:0000404!2.74e-14!33;CL:0000117!1.41e-13!23;CL:0000337!1.41e-13!23;CL:0000221!1.47e-13!44;CL:0000133!1.47e-13!44;CL:0002319!3.05e-13!43;CL:0000393!6.33e-13!39;CL:0000211!6.33e-13!39;CL:0000055!7.28e-12!50
|ontology_enrichment_celltype=CL:0000540!2.74e-14!33;CL:0000047!2.74e-14!33;CL:0000031!2.74e-14!33;CL:0000404!2.74e-14!33;CL:0000117!1.41e-13!23;CL:0000337!1.41e-13!23;CL:0000221!1.47e-13!44;CL:0000133!1.47e-13!44;CL:0002319!3.05e-13!43;CL:0000393!6.33e-13!39;CL:0000211!6.33e-13!39;CL:0000055!7.28e-12!50
|ontology_enrichment_celltype_v019_2=CL:0000540,2.68e-14,33;CL:0000047,2.68e-14,33;CL:0000031,2.68e-14,33;CL:0000404,2.68e-14,33;CL:0000117,1.38e-13,23;CL:0000337,1.38e-13,23;CL:0000221,1.43e-13,44;CL:0000133,1.43e-13,44;CL:0002319,2.98e-13,43;CL:0000393,6.20e-13,39;CL:0000211,6.20e-13,39
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!3.86e-33!73;UBERON:0005743!3.86e-33!73;UBERON:0000073!1.12e-31!75;UBERON:0001016!1.12e-31!75;UBERON:0002346!3.24e-30!71;UBERON:0003075!3.24e-30!71;UBERON:0007284!3.24e-30!71;UBERON:0004121!4.51e-29!102;UBERON:0000924!4.51e-29!102;UBERON:0006601!4.51e-29!102;UBERON:0000033!7.92e-28!63;UBERON:0001049!9.32e-27!52;UBERON:0005068!9.32e-27!52;UBERON:0006241!9.32e-27!52;UBERON:0007135!9.32e-27!52;UBERON:0000955!1.30e-25!50;UBERON:0006238!1.30e-25!50;UBERON:0002616!5.12e-25!49;UBERON:0003056!2.66e-23!49;UBERON:0007811!3.67e-22!86;UBERON:0003080!1.68e-20!40;UBERON:0000153!4.32e-20!94;UBERON:0002780!9.43e-20!39;UBERON:0001890!9.43e-20!39;UBERON:0006240!9.43e-20!39;UBERON:0002020!1.06e-18!34;UBERON:0002791!1.08e-15!29;UBERON:0003528!1.08e-15!29;UBERON:0001893!1.08e-15!29;UBERON:0000956!3.61e-11!21;UBERON:0001869!3.61e-11!21;UBERON:0000203!3.61e-11!21;UBERON:0002619!2.26e-09!17;UBERON:0002021!3.81e-07!10;UBERON:0000411!3.81e-07!10;UBERON:0001950!3.81e-07!10;UBERON:0003076!9.04e-07!12;UBERON:0003057!9.04e-07!12
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.63e-33,73;UBERON:0001016,1.06e-31,75;UBERON:0002346,1.46e-30,64;UBERON:0003075,1.46e-30,64;UBERON:0007284,1.46e-30,64;UBERON:0004121,1.35e-28,95;UBERON:0000924,1.35e-28,95;UBERON:0006601,1.35e-28,95;UBERON:0000073,2.49e-28,54;UBERON:0001049,8.88e-27,52;UBERON:0005068,8.88e-27,52;UBERON:0006241,8.88e-27,52;UBERON:0007135,8.88e-27,52;UBERON:0010314,9.05e-27,92;UBERON:0010371,3.60e-26,73;UBERON:0000955,2.20e-23,47;UBERON:0006238,2.20e-23,47;UBERON:0003056,2.56e-23,49;UBERON:0002616,8.42e-23,46;UBERON:0003080,1.62e-20,40;UBERON:0002780,9.11e-20,39;UBERON:0001890,9.11e-20,39;UBERON:0006240,9.11e-20,39;UBERON:0002020,1.03e-18,34;UBERON:0003528,1.05e-15,29;UBERON:0002791,1.05e-15,29;UBERON:0001893,1.05e-15,29;UBERON:0000956,3.55e-11,21;UBERON:0001869,3.55e-11,21;UBERON:0000203,3.55e-11,21;UBERON:0002619,2.22e-09,17;UBERON:0002021,3.77e-07,10;UBERON:0000411,3.77e-07,10;UBERON:0001950,3.77e-07,10;UBERON:0003076,8.95e-07,12;UBERON:0003057,8.95e-07,12
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.21339313086926,19.7292528539467,2.8408143748356,2.64733584731356,2.91676782516071,3.48731523389874,3.71703476079712,4.3422178298929,2.47388331203505,3.77493639932559,13.7702948870823,16.9937703692141,29.3890342184206,9.52808511863772,6.57350125854894,9.09445760844565,12.5318686967237,15.4971456729387,16.9475583823156,17.2796746794255,20.3952228895258,18.975494857095,22.3834131003786,24.1695544234586,26.1696209261696,26.4141798930346,4.30787728868902,1.33191572024439,2.51198798506532,0.503653849092235,16.0347363046718,4.69206188627955,7.69236821922513,3.21552568618599,12.0377304968487,290.847198947789,313.02116082488,287.593547746577,207.598644271175,387.756706190184,355.035131773159,357.086902622625,307.569381802143,340.763091556122,347.934929497223,22.8332164685189,25.537591897666,29.5369137954652,19.2054306483952,44.0187641518763,37.3202322153529,33.5592558980439,30.6992235285952,36.9057091030588,29.3128765646005,26.1083678886947,33.9527414494937,27.9988107334948,29.7716958682642,28.7177344778066,30.0065025508336,28.3916598564896,25.8498355421365,33.7910438658711,31.7949667490298,28.8010172003749,27.1537983423786,24.7973637545214,30.3774010761567,29.4562360699985,28.5997374673867,37.5002344389184,24.2024134522815,33.9510284614654,35.3519631144375,28.4724043498018,28.2707864417867,27.4184798923692,28.3534419370318,23.3416999287181,62.9522656403624,30.1771774894577,29.2224633505686,16.4507965579205,16.9855392722027,14.3758058084661
|phase1_expression=38.115425610941,0,0,0,0,0.671517087647559,1.40167584357315,11.879345756625,1.267098499365,1.87251621057595,0.856089841127525,1.19658238493005,15.9216678836021,19.5821701418554,0.333109761815663,2.83465374345756,2.79824751251259,6.30924330716475,7.40417941470989,8.48779303596061,74.327835592035,14.0993150705257,10.1867917764185,1.59992422793407,2.2940928106717,0,0.430761996159075,0.430942465371778,0.190023419456374,1.76421090831952,0.665191531965914,0.635030673459631,0,0,0.288851619751275,0,0.408338712524738,0.418531630736908,0.7813353445238,0.523523743973798,1.17646297606203,1.36609096991689,0.485510353031154,24.2980858692864,20.0726323814639,12.4811791469943,10.9534788208725,20.9304150125229,24.6048524662608,21.970578595394,13.4386964760348,28.7505128729943,1.67782606057736,7.25362142011344,5.04140698713696,9.77585856936598,13.1805382371828,3.09403255366465,182.287131234498,292.003020558162,204.09371192899,7.11573517345177,7.11435836888911,3.1496490104849,2.96659908770092,2.8419204597844,19.4740071836963,19.5951335713993,56.9255971573542,71.9581651307911,60.9942387919008,319.357800563452,380.114758977727,82.4363078716641,80.0309683002274,70.7798465689716,568.197945956846,450.608616102627,490.312054153929,207.457130599595,224.327702113108,193.258860476558,523.747306126591,459.777052395882,431.349453473935,307.297614649035,300.546618166906,208.953778770162,4.69502398665741,6.42358260907677,3.18850937571846,5.16254326188832,0.679971333707751,3.2382191498269,1.94932925234301,1.79210754838934,22.611551641212,19.4290567738986,12.9893002301434,15.546941278455,32.1122997090832,6.41632387071589,12.7402619853323,0,0.216491041011214,0,0,13.1311461676919,4.66088190564909,19.8912466346865,15.6136794089522,20.7036525252256,17.7573932887165,18.9910527096304,16.344830291863,9.17366116706631,0.741584903203122,3.47038456607788,3.5384422077995,4.52947179852746,1.54589062922275,6.78825354389311,11.1835056730873,296.879728169709,229.344143960733,6.13096932500619,1.67741174308288,1.19980546198682,1.77898317902291,569.354220377731,272.670359279901,160.711916352354,337.045356852824,299.442800533817,504.301584146052,364.231635587116,6.51771928642024,3.6078021476927,6.57079171927554,50.2956035568673,22.2505957466223,32.8760009339866,28.2697543794398,25.7705238499073,33.3378845841507,40.4839356100125,38.6051105186083,94.6854336904797,10.3472636607764,12.2918952109083,13.5482365606241,8.32943783224784,8.61946472599353,9.4028084960985,4.11564272815887,4.77682240364384,0.702213187313235,0.772043721344145,1.42081749697796,10.1491628542396,7.97388603935727,14.2249028554202,15.1516630774535,11.6090896730968,12.8041703696524,12.7893669612724,13.9502168727802,11.4430035519826,10.8609500942897,10.342550236983,10.9442892886905,11.4035990191759,12.5143565715899,17.0442151825672,277.372442156084,114.327024353385,1.98251269790279,1.58670339998127,9.59797127408553,11.3795969211615,7.86091514064769,7.05892336181699,7.78323153457046,7.60902504450237,4.74529061544512,4.77626968699632,8.54539709920916,9.94782360205754,9.74820435595601,7.19055526923377,6.05186539649144,5.37681437786791,7.2073802362171,7.5404018322421,6.76246414038483,4.2766778847516,5.04276466635827,5.40045813155453,7.58838445491087,5.75679577120448,7.84993639206874,9.37818445805684,2.37162101669719,0.83422552858047,1.96558995113203,0.899448449539415,1.62288097110802,0.241177159752417,0.25462585178142,0.287696137450811,1.62135226775035,0.823684239564244,2.87536413054709,2.60498663367952,2.18426371180192,1.51547326768267,3.76734568396016,13.0259750768109,14.4107488329952,8.33762211790133,4.72598431681875,5.26209765903083,4.69380496577004,5.3602002381381,6.66522194480839,5.26860849216057,8.6699329258405,11.9590932410338,8.45110273884682,10.4872521418072,12.4333186943445,14.1756077409881,3.01582567878545,1.08781136763742,6.88469982226651,6.07060841870411,501.560043121862,483.029360446469,13.2787305755107,4.29200576247434,23.6631164562193,21.8645696806118,57.7334705923901,10.2756583119597,14.4819138153556,13.3045969470751,23.074209995469,34.1939353756235,33.5994611254545,264.447443415147,7.2389443456217,8.90328018336276,7.81857404897165,11.2179683621324,25.2215762845929,7.76898035695941,8.46505959501303,4.33791683438566,7.67784921490009,9.22305443831782,8.26970538138308,6.5436071305951,8.91243445961803,16.1178746547266,16.8669773719998,16.5016869197099,101.451002514629,22.6876978479451,31.8222362105576,29.1498367642966,47.5271826161293,47.4461054821508,58.2503532931508,56.9349454844301,2.81606049676452,1.27099242518292,16.0985730580122,6.10079135883476,3.39075296061402,5.30753739367772,4.65552141612232,3.44695889464629,5.53813589596716,475.430474354947,4.78438466233988,3.92135049130123,1.66675074632741,1.88368457004691,1.91371918809435,2.28778173206523,2.88963330989554,1.81936888020755,3.59319931891502,11.4560474161814,14.8677916983134,9.14937602070819,9.28845931067491,8.99079672862215,11.7915784422936,10.3845546716312,11.075563067195,13.6113089831695,5.83267379813068,6.21339313086926,19.7292528539467,2.8408143748356,2.64733584731356,2.91676782516071,3.48731523389874,3.71703476079712,4.3422178298929,2.47388331203505,3.77493639932559,13.7702948870823,16.9937703692141,29.3890342184206,9.52808511863772,6.57350125854894,9.09445760844565,12.5318686967237,15.4971456729387,16.9475583823156,17.2796746794255,20.3952228895258,18.975494857095,22.3834131003786,24.1695544234586,26.1696209261696,26.4141798930346,4.30787728868902,1.33191572024439,2.51198798506532,0.503653849092235,16.0347363046718,4.69206188627955,7.69236821922513,3.21552568618599,12.0377304968487,290.847198947789,313.02116082488,287.593547746577,207.598644271175,387.756706190184,355.035131773159,357.086902622625,307.569381802143,340.763091556122,347.934929497223,22.8332164685189,25.537591897666,29.5369137954652,19.2054306483952,44.0187641518763,37.3202322153529,33.5592558980439,30.6992235285952,36.9057091030588,29.3128765646005,26.1083678886947,33.9527414494937,27.9988107334948,29.7716958682642,28.7177344778066,30.0065025508336,28.3916598564896,25.8498355421365,33.7910438658711,31.7949667490298,28.8010172003749,27.1537983423786,24.7973637545214,30.3774010761567,29.4562360699985,28.5997374673867,37.5002344389184,24.2024134522815,33.9510284614654,35.3519631144375,28.4724043498018,28.2707864417867,27.4184798923692,28.3534419370318,23.3416999287181,62.9522656403624,30.1771774894577,29.2224633505686,16.4507965579205,16.9855392722027,14.3758058084661
|short_description=p1@Tspyl4
|short_description=p1@Tspyl4
}}
}}

Latest revision as of 23:24, 25 September 2015

Short description:p1@Tspyl4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Tspyl4_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 11bp_to_ENSMUST00000047935, NM_030203, uc007euu.1_5end
EntrezGene:Tspyl4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Tspyl4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G738.12
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.67
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.40
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E911.88
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.27
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.87
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.86
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.20
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E415.92
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E819.58
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A32.83
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.80
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A26.31
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A47.40
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A68.49
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A374.33
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H214.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I910.19
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.60
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.29
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.43
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C11.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.67
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H21.37
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D824.30
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D920.07
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B312.48
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B710.95
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C220.93
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B824.60
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C321.97
Mouse Astrocytes, donor2.CNhs12078.11552-120C413.44
Mouse Astrocytes, donor3.CNhs12107.11633-122C428.75
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.68
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I97.25
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A15.04
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C19.78
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E113.18
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C53.09
Mouse Granule cells, donor1.CNhs12131.11713-123C3182.29
Mouse Granule cells, donor2.CNhs12357.11731-123E3292.00
Mouse Granule cells, donor3.CNhs12108.11636-122C7204.09
Mouse Meningeal cells, donor1.CNhs12132.11716-123C67.12
Mouse Meningeal cells, donor3.CNhs12109.11639-122D17.11
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C73.15
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E72.97
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.84
Mouse Microglia, donor1.CNhs12629.11718-123C819.47
Mouse Microglia, donor2.CNhs12634.11736-123E819.60
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D556.93
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F571.96
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D960.99
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1319.36
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D5380.11
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D282.44
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F280.03
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D670.78
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3568.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3450.61
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7490.31
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D4207.46
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F4224.33
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D8193.26
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4523.75
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5459.78
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6431.35
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D6307.30
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F6300.55
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E1208.95
Mouse Schwann, donor1.CNhs12507.11728-123D94.70
Mouse Schwann, donor2.CNhs12573.11746-123F96.42
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G33.19
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F75.16
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C83.24
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.95
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.79
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A722.61
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I719.43
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E312.99
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I815.55
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G632.11
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H16.42
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I812.74
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B613.13
accessory axillary lymph node, adult.CNhs10475.1063-29H94.66
adrenal gland, adult.CNhs10508.49-24D719.89
adrenal gland, embryo E14.CNhs11038.406-44C515.61
adrenal gland, embryo E16.CNhs11004.1254-43D620.70
adrenal gland, embryo E17.CNhs11043.1263-45I117.76
adrenal gland, embryo E18.CNhs11026.1262-18F518.99
adrenal gland, neonate N00.CNhs11191.1311-23C116.34
adrenal gland, neonate N25.CNhs11223.1377-27I39.17
amnion, adult pregnant day17.5.CNhs10488.583-22A80.74
aorta, adult.CNhs10498.46-23H13.47
bone (os femoris), adult.CNhs10483.56-12G23.54
bone (os femoris), neonate N02.CNhs11227.1985-43F54.53
bone (os femoris), neonate N16.CNhs11225.1525-43A61.55
bone (os femoris), neonate N20.CNhs11195.1350-25C36.79
cecum, adult.CNhs10467.37-13H411.18
cerebellum, adult.CNhs10494.15-8B2296.88
cerebellum, neonate N30.CNhs11135.1395-42I2229.34
colon, adult.CNhs10468.36-18H76.13
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.68
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.78
corpora quadrigemina, adult.CNhs10501.16-22A4569.35
corpus striatum, adult.CNhs10487.19-21D8272.67
corpus striatum, neonate N00.CNhs11226.630-43F1160.71
cortex, adult.CNhs10473.12-14D5337.05
cortex, neonate N30.CNhs11107.1392-42F2299.44
diencephalon, adult.CNhs10482.20-12F2504.30
diencephalon, neonate N30.CNhs11201.1388-42B2364.23
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B16.52
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A23.61
epididymis, adult.CNhs10490.58-23B26.57
eyeball, adult.CNhs10484.31-12G450.30
eyeball, embryo E12.CNhs11016.345-16C622.25
eyeball, embryo E14.CNhs10521.399-16E232.88
eyeball, embryo E15.CNhs10593.426-16C928.27
eyeball, embryo E17.CNhs11023.1261-18D425.77
eyeball, neonate N00.CNhs11207.633-15C633.34
eyeball, neonate N01.CNhs11140.1532-43E740.48
eyeball, neonate N02.CNhs11205.1551-44G838.61
eyeball, neonate N16.CNhs11188.777-19A294.69
forelimb, embryo E11.CNhs10596.335-25E210.35
forelimb, embryo E12.CNhs10600.359-14H212.29
forelimb, embryo E13.CNhs10589.384-1E213.55
forelimb, embryo E14.CNhs10577.413-26A88.33
forelimb, embryo E15.CNhs11007.437-20E78.62
forelimb, embryo E17.CNhs10598.1517-43C49.40
forelimb, embryo E18.CNhs11008.1520-43B54.12
gonad, embryo E13.CNhs11044.1564-45I64.78
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.77
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.42
heart, embryo E11.CNhs10586.331-24E910.15
heart, embryo E12.CNhs11015.353-12F57.97
heart, embryo E13.CNhs11013.376-3I914.22
heart, embryo E14.CNhs10597.403-26D415.15
heart, embryo E15.CNhs11017.431-16C811.61
heart, embryo E16.CNhs11021.457-17C612.80
heart, embryo E17.CNhs11025.479-18E512.79
heart, embryo E18.CNhs11030.1283-20G313.95
heart, neonate N00.CNhs11213.639-21E311.44
heart, neonate N03.CNhs11221.1349-25I210.86
heart, neonate N10.CNhs11118.749-24G110.34
heart, neonate N16.CNhs11209.782-15G110.94
heart, neonate N20.CNhs11127.821-26I611.40
heart, neonate N25.CNhs11196.1351-25D312.51
heart, neonate N30.CNhs11202.1390-42D217.04
hippocampus, adult.CNhs10478.13-16E8277.37
hippocampus, neonate N00.CNhs11228.627-43G1114.33
intestinal mucosa, adult.CNhs10506.860-29I31.98
intestine, adult.CNhs10496.178-9A31.59
intestine, embryo E12.CNhs11019.1251-16I59.60
intestine, embryo E13.CNhs11010.381-16D511.38
intestine, embryo E15.CNhs10602.976-16D87.86
intestine, embryo E16.CNhs10585.463-22H47.06
intestine, embryo E17.CNhs10582.482-18D37.78
intestine, embryo E18.CNhs10526.1289-20F77.61
intestine, neonate N00.CNhs11126.644-26D14.75
intestine, neonate N01.CNhs11192.1322-23E94.78
intestine, neonate N06.CNhs11102.688-20B88.55
intestine, neonate N07.CNhs11095.720-20F29.95
intestine, neonate N10.CNhs11098.755-23A59.75
intestine, neonate N20.CNhs11187.827-18D17.19
intestine, neonate N25.CNhs11121.1352-25E36.05
intestine, neonate N30.CNhs11131.1384-42G15.38
kidney, embryo E14.CNhs10606.411-4I97.21
kidney, embryo E15.CNhs10997.434-16F87.54
kidney, embryo E16.CNhs10584.464-22A56.76
kidney, embryo E17.CNhs11028.483-18I24.28
kidney, embryo E18.CNhs11001.1288-20C75.04
kidney, neonate N00.CNhs11214.646-21G75.40
kidney, neonate N10.CNhs11206.758-6D57.59
kidney, neonate N20.CNhs11113.832-19I15.76
kidney, neonate N25.CNhs11122.1353-25F37.85
kidney, neonate N30.CNhs11203.1385-42H19.38
liver, adult pregnant day01.CNhs10466.508-5B22.37
liver, embryo E12.CNhs10601.355-15F80.83
liver, embryo E13.CNhs10524.378-3H61.97
liver, embryo E14.CNhs10594.409-16E10.90
liver, embryo E15.CNhs10520.433-16D71.62
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F41.62
liver, neonate N03.CNhs11123.1345-25G20.82
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H22.60
liver, neonate N10.CNhs11115.751-24B92.18
liver, neonate N20.CNhs11220.823-25A31.52
liver, neonate N25.CNhs11198.1368-26H13.77
liver, neonate N30.CNhs11106.1382-42D113.03
lung, adult.CNhs10474.28-22B114.41
lung, embryo E12.CNhs10522.354-16G28.34
lung, embryo E14.CNhs10604.404-26F84.73
lung, embryo E15.CNhs11020.432-17C55.26
lung, embryo E16.CNhs10998.458-17B64.69
lung, embryo E17.CNhs10605.480-44A65.36
lung, embryo E18.CNhs10583.1287-20I66.67
lung, neonate N00.CNhs11224.640-42C65.27
lung, neonate N06.CNhs11212.683-20E58.67
lung, neonate N07.CNhs11111.715-19A311.96
lung, neonate N10.CNhs11219.750-23E68.45
lung, neonate N20.CNhs11109.822-18A410.49
lung, neonate N25.CNhs11119.1359-25C712.43
lung, neonate N30.CNhs11133.1394-42H214.18
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.09
mammary gland, adult lactating day02.CNhs10480.595-22B66.88
mammary gland, adult pregnant day19.CNhs10476.588-5H26.07
medulla oblongata, adult.CNhs10477.17-12C2501.56
medulla oblongata, neonate N30.CNhs11200.1396-42A3483.03
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C713.28
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C24.29
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E123.66
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E221.86
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E357.73
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D710.28
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D814.48
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D913.30
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D423.07
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D534.19
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D633.60
olfactory brain, adult.CNhs10489.18-22I9264.45
ovary, adult.CNhs10507.91-2I77.24
ovary, embryo E18.CNhs11040.505-44H78.90
ovary, neonate N00.CNhs11217.1299-22I47.82
oviduct, adult pregnant day01.CNhs10500.988-6G611.22
pancreas, adult.CNhs10486.34-16E425.22
pancreas, embryo E14.CNhs11012.405-44F47.77
pancreas, embryo E15.CNhs11042.1556-45F28.47
pancreas, embryo E16.CNhs11003.460-26E54.34
pancreas, embryo E17.CNhs10599.1558-45G37.68
pancreas, embryo E18.CNhs10580.1535-43I79.22
pancreas, neonate N00.CNhs11105.645-26G98.27
pancreas, neonate N01.CNhs11138.1531-43D76.54
pancreas, neonate N02.CNhs11139.1539-43D88.91
pancreas, neonate N16.CNhs11136.787-43B616.12
pancreas, neonate N25.CNhs11094.1555-45E216.87
pancreas, neonate N30.CNhs11182.1548-44H516.50
pituitary gland, adult.CNhs10493.21-1G8101.45
pituitary gland, embryo E12.CNhs11018.346-16E622.69
pituitary gland, embryo E13.CNhs11009.370-44C731.82
pituitary gland, embryo E14.CNhs11037.398-44A529.15
pituitary gland, embryo E15.CNhs10592.427-16B947.53
pituitary gland, embryo E16.CNhs11036.449-43F647.45
pituitary gland, embryo E17.CNhs11039.1265-44F558.25
pituitary gland, neonate N00.CNhs11190.1308-22E956.93
placenta, adult pregnant day10.CNhs10472.539-13I72.82
placenta, adult pregnant day17.CNhs10464.577-18G31.27
prostate, adult.CNhs10470.859-1F816.10
skin, adult.CNhs10492.30-1C36.10
skin, neonate N00.CNhs11124.650-25G43.39
skin, neonate N03.CNhs11215.662-22H35.31
skin, neonate N06.CNhs11097.693-20I54.66
skin, neonate N10.CNhs11108.762-6C43.45
small intestine, neonate N16.CNhs11114.790-21I15.54
spinal cord, adult.CNhs10505.24-13C9475.43
spleen, adult.CNhs10465.25-2G24.78
spleen, embryo E16.CNhs11035.461-43C13.92
spleen, embryo E18.CNhs11011.1271-21F21.67
spleen, neonate N10.CNhs11116.752-24D11.88
spleen, neonate N20.CNhs11112.824-19H11.91
spleen, neonate N25.CNhs11099.1354-25G32.29
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C62.89
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.82
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D33.59
stomach, adult.CNhs10503.33-1H611.46
stomach, embryo E12.CNhs10588.356-43E314.87
stomach, embryo E15.CNhs10603.1252-16G89.15
stomach, embryo E16.CNhs11022.459-17D49.29
stomach, embryo E17.CNhs11006.1035-18D58.99
stomach, embryo E18.CNhs10999.1286-20C611.79
stomach, neonate N03.CNhs11193.1340-24B810.38
stomach, neonate N07.CNhs11210.718-18A911.08
stomach, neonate N25.CNhs11104.1355-25E413.61
stomach, neonate N30.CNhs11134.1386-42I15.83
submandibular gland, adult.CNhs10469.59-29C16.21
testis, adult.CNhs10504.57-7G519.73
testis, embryo E13.CNhs11031.389-23F52.84
testis, embryo E15.CNhs11034.443-27C52.65
testis, embryo E16.CNhs11033.470-26G52.92
testis, embryo E17.CNhs11029.486-18I53.49
testis, embryo E18.CNhs11027.503-18G53.72
testis, neonate N00.CNhs11189.1300-22B74.34
testis, neonate N07.CNhs11222.726-26I42.47
testis, neonate N10.CNhs11204.763-44D93.77
testis, neonate N20.CNhs11110.839-18H313.77
testis, neonate N30.CNhs11130.1391-42E216.99
thymus, adult.CNhs10471.38-12B529.39
thymus, embryo E14.CNhs11041.402-44I49.53
thymus, embryo E15.CNhs11005.430-45I26.57
thymus, embryo E16.CNhs11002.456-26C59.09
thymus, embryo E17.CNhs10581.478-18C112.53
thymus, embryo E18.CNhs10595.1273-19G415.50
thymus, neonate N02.CNhs11181.1541-43F816.95
thymus, neonate N03.CNhs11137.2104-43C717.28
thymus, neonate N06.CNhs11197.681-26C420.40
thymus, neonate N07.CNhs11211.713-19D318.98
thymus, neonate N10.CNhs11194.748-24E422.38
thymus, neonate N20.CNhs11186.820-7A224.17
thymus, neonate N25.CNhs11125.1362-25G726.17
thymus, neonate N30.CNhs11132.1393-42G226.41
tongue, adult.CNhs10499.32-1B44.31
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.33
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F72.51
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.50
urinary bladder, adult.CNhs10481.879-12E416.03
uterus, adult pregnant day19.CNhs10497.590-15F54.69
uterus, adult.CNhs10509.92-27E57.69
vagina, adult.CNhs10502.89-27D53.22
vesicular gland, adult.CNhs10491.51-27F812.04
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1290.85
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2313.02
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3287.59
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7207.60
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4387.76
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5355.04
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6357.09
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7307.57
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8340.76
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9347.93
whole body, embryo E11.CNhs11014.324-5I822.83
whole body, embryo E12.CNhs10587.857-27C925.54
whole body, embryo E13.CNhs10512.372-23H229.54
whole body, embryo E14.5.CNhs10578.420-27D219.21
whole body, embryo E14.CNhs10519.395-14B144.02
whole body, embryo E16.CNhs10514.453-14F237.32
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G533.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G530.70
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G536.91
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G529.31
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G526.11
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G533.95
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G528.00
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G529.77
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G528.72
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G530.01
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G528.39
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G525.85
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G533.79
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G531.79
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G528.80
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G527.15
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G524.80
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G530.38
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G529.46
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G528.60
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G537.50
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G524.20
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G533.95
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G535.35
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G528.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G528.27
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G527.42
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G528.35
whole body, embryo E17.5.CNhs10513.490-9F923.34
whole body, embryo E17.CNhs10517.475-3I562.95
whole body, embryo E18.CNhs10516.493-3B330.18
whole body, neonate N00.CNhs10525.657-19C229.22
whole body, neonate N01.CNhs10576.659-23C616.45
whole body, neonate N06.CNhs10515.692-21D116.99
whole body, neonate N10.CNhs10518.761-6B414.38





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron2.68e-1433
neuronal stem cell2.68e-1433
neuroblast2.68e-1433
electrically signaling cell2.68e-1433
CNS neuron (sensu Vertebrata)1.38e-1323
neuroblast (sensu Vertebrata)1.38e-1323
ectodermal cell1.43e-1344
neurectodermal cell1.43e-1344
neural cell2.98e-1343
electrically responsive cell6.20e-1339
electrically active cell6.20e-1339

Uber anatomy
Ontology termp-valuen
central nervous system3.63e-3373
nervous system1.06e-3175
neurectoderm1.46e-3064
neural plate1.46e-3064
presumptive neural plate1.46e-3064
ectoderm-derived structure1.35e-2895
ectoderm1.35e-2895
presumptive ectoderm1.35e-2895
regional part of nervous system2.49e-2854
neural tube8.88e-2752
neural rod8.88e-2752
future spinal cord8.88e-2752
neural keel8.88e-2752
structure with developmental contribution from neural crest9.05e-2792
ecto-epithelium3.60e-2673
brain2.20e-2347
future brain2.20e-2347
pre-chordal neural plate2.56e-2349
regional part of brain8.42e-2346
anterior neural tube1.62e-2040
regional part of forebrain9.11e-2039
forebrain9.11e-2039
future forebrain9.11e-2039
gray matter1.03e-1834
brain grey matter1.05e-1529
regional part of telencephalon1.05e-1529
telencephalon1.05e-1529
cerebral cortex3.55e-1121
cerebral hemisphere3.55e-1121
pallium3.55e-1121
regional part of cerebral cortex2.22e-0917
occipital lobe3.77e-0710
visual cortex3.77e-0710
neocortex3.77e-0710
posterior neural tube8.95e-0712
chordal neural plate8.95e-0712
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