FFCP PHASE1:Mm9::chr3:95086819..95086864,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=75007 | |EntrezGene=75007 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q76LS9,B7ZMR0 | |UniProt=Q76LS9,B7ZMR0 | ||
|association_with_transcript=0bp_to_NM_133858,NM_199475,uc008qjb.1,uc008qjc.1,uc008qjd.2,uc008qje.2_5end | |association_with_transcript=0bp_to_NM_133858,NM_199475,uc008qjb.1,uc008qjc.1,uc008qjd.2,uc008qje.2_5end | ||
|cluster_id=chr3:95086819..95086864,+ | |||
|description=CAGE_peak_4_at_Fam63a_5end | |description=CAGE_peak_4_at_Fam63a_5end | ||
|id=chr3:95086819..95086864,+ | |id=chr3:95086819..95086864,+ | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001007!4.78e-10!128;UBERON:0001555!4.78e-10!128;UBERON:0007026!4.78e-10!128;UBERON:0004119!4.81e-10!130;UBERON:0000925!4.81e-10!130;UBERON:0006595!4.81e-10!130;UBERON:0004921!2.41e-09!126;UBERON:0004185!2.41e-09!126;UBERON:0000077!3.60e-08!97;UBERON:0009854!1.31e-07!23;UBERON:0009856!1.31e-07!23;UBERON:0001041!3.40e-07!92;UBERON:0002107!4.49e-07!22;UBERON:0007499!4.49e-07!22;UBERON:0006925!4.49e-07!22;UBERON:0009497!4.49e-07!22;UBERON:0000015!4.49e-07!22;UBERON:0002423!4.49e-07!22;UBERON:0006235!4.49e-07!22;UBERON:0008835!4.49e-07!22;UBERON:0003894!4.49e-07!22;UBERON:0004161!4.49e-07!22;UBERON:0008836!4.49e-07!22;UBERON:0000466!8.24e-07!79 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0009854,1.27e-07,23;UBERON:0009856,1.27e-07,23;UBERON:0001007,2.91e-07,116;UBERON:0001555,2.91e-07,116;UBERON:0007026,2.91e-07,116;UBERON:0004119,2.92e-07,118;UBERON:0000925,2.92e-07,118;UBERON:0006595,2.92e-07,118;UBERON:0002107,4.39e-07,22;UBERON:0007499,4.39e-07,22;UBERON:0006925,4.39e-07,22;UBERON:0009497,4.39e-07,22;UBERON:0000015,4.39e-07,22;UBERON:0002423,4.39e-07,22;UBERON:0006235,4.39e-07,22;UBERON:0008835,4.39e-07,22;UBERON:0003894,4.39e-07,22;UBERON:0004161,4.39e-07,22;UBERON:0008836,4.39e-07,22;UBERON:0002100,9.77e-07,90 | |||
|phase1_expression=1.44133962394315,5.23463111459042,5.45999087267443,2.41971369045464,2.00358291978539,3.3575854382378,4.67225281191051,6.19791952519566,0.140788722151667,0.468129052643987,0.34243593645101,0.159544317990673,7.87523357683546,4.72070173062586,3.33109761815663,3.03712901084739,0.699561878128147,7.41336088591859,7.54129384831563,3.39511721438424,3.23164502574065,0.695036658406197,0.261199789138935,6.07971206614945,7.57050627521661,2.8711598205751,2.15380998079537,4.09395342103189,7.03086651988583,5.04060259519861,6.87364583031445,2.54012269383853,0,0,2.88851619751275,1.66234645358492,0.408338712524738,15.0671387065287,7.813353445238,8.37637990358077,15.2940186888064,13.6609096991689,14.0798002379035,1.38486499773135,1.72340783073175,1.46837401729345,3.9119567217402,4.36050312760893,0.659058548203415,1.55543919259427,4.19959264876088,4.31257693094915,4.69791296961662,6.5282592781021,3.02484419228218,1.80081605225163,2.0057340795713,1.03134418455488,2.22548106945558,3.1739458756322,3.80298842103708,2.03306719241479,3.55717918444456,2.6996991518442,3.9554654502679,3.5524005747305,1.79760066311043,2.68952813725088,3.11068836925433,4.59020190327748,4.41682418837902,1.42825492201902,3.09215957332259,3.06226998037385,3.25874601462004,2.75765635983006,6.60695285996332,2.55374676170375,1.0752457327937,4.3522474950964,5.12330804173494,4.16730696445408,3.35019598801657,2.25105044012672,1.5279824777681,2.65165726926301,1.70846016958924,1.67759501242771,1.59025005999687,2.11600368298999,5.79728977403356,6.88339101585109,10.879541339324,11.3337670243942,11.695975514058,6.72040330646003,4.77511028447956,1.02258193546835,0.519572009205738,1.06001872353102,1.12674735821344,1.28326477414318,0,0,1.94841936910093,2.02687892380079,1.01104889002957,4.45317130904334,7.76813650941515,2.67195850316685,1.73485326766136,1.52232739156071,1.38369298353635,1.50722640552623,2.82212897125692,2.01066546127481,16.0676729027343,2.60278842455841,0.884610551949874,2.10296904931632,1.98757366614354,1.93950101254089,11.1835056730873,4.68449275218475,5.44561437714983,3.83185582812887,2.63593273913025,0.599902730993408,1.52484272487678,2.39665023047716,1.83000241127451,2.38743269014442,1.39059456153821,1.27857728665165,2.0778804455956,1.94689515681309,1.83310854930569,1.99051152976149,0.758168275301024,1.89397670297827,0.650602214813519,2.06911893990126,1.0803727788321,1.35634336052144,1.42876648217788,1.15302348256365,1.49922759295566,1.29351685369508,0.646703978798527,1.51284864134255,1.40760899331159,1.97276159184817,3.61461423993277,4.52727816478817,5.35033554660653,1.79130840136644,0.702213187313235,1.28673953557358,1.42081749697796,1.03562886267751,1.17263029990548,1.44049649168812,0.946978942340841,0.787056926989615,1.69693824176116,2.09280550275367,2.41446061259657,1.86824547787471,1.31647879930784,1.97000956894914,3.72916523910936,3.21639972335731,1.75640092232841,3.48936688776967,1.26173969138476,2.36680608472354,3.96502539580558,3.96675849995316,1.91959425481711,0.464473343720877,2.70621668776396,2.21851877085677,2.44615848229357,3.42406127002606,2.84717436926707,2.47048432086016,4.27269854960458,3.38226002469956,3.8992817423824,0,4.32276099749388,3.98282546508734,1.51734320762465,1.82797620175566,0,0.610953983535943,0.969762435838129,2.45475369616115,2.59269802209455,3.09981310757165,2.66897837330337,3.20832626196681,9.19003143970162,1.33476084572875,2.75182593158484,1.34917267430912,1.21716072833102,3.13530307678142,3.8193877767213,8.63088412352432,8.59316701907687,11.2570179407113,8.62609239164127,12.2806512730606,13.7296576170407,11.6186283855671,13.4548060141434,14.473305640901,8.49864674766381,1.13694847062291,2.77040459951444,2.20668611507745,3.28566347603903,7.20276906999808,7.61739650835244,12.2934198150413,7.88175720530955,6.86540537911202,6.05928120898451,6.55453258862952,11.2245238212832,11.1379775107764,4.52373851817817,3.80733978673097,1.96705709207614,1.10374698521893,2.72936002979246,1.28932855251423,0.655739781506702,3.28212205365685,0.94652465824877,1.56175497718655,1.29254038639679,0.477937595905104,1.11399337041197,1.13230612315533,0,0.876767573733936,0.790575555893047,3.85585579706168,2.55492153374884,0.890328018336276,2.28041743095006,3.13443233647817,6.63725691699814,3.39892890616974,3.32555912661226,5.84675747243284,8.85905678642318,5.84126781093462,4.9101375701962,3.99887102425256,3.56497378384721,4.42451461110142,8.4334886859999,11.3449097573006,4.42571487479924,1.98067203434441,1.03486947026204,2.7863814554107,2.30542303734956,4.28085162244969,3.29098041204242,4.87143918583359,1.87737366450968,4.02480934641258,10.8058915046931,4.28704257647848,4.68246837418126,3.98065304525829,3.46179797609096,3.11867709515616,2.91480836629851,1.8542530201051,3.93003025835061,2.47664241555867,2.40752885580625,2.44878994106098,2.7338845544205,2.97411625168479,4.75939603982795,3.63873776041511,6.90999869022119,7.63736494412091,2.84702394223022,3.65975040828328,4.96824567780286,4.80903080833278,4.58561383866973,7.01294601201068,5.78574190077352,5.75863072364865,5.70305882483889,3.72803587852155,0.56369293868419,1.79419855252775,2.15096037594227,3.88902376688095,1.54991788173277,1.68956125490778,1.76035857968631,1.43224823328345,1.25831213310853,0.966336483304024,1.15212002503146,3.79213344753814,1.41907650703115,1.1298205288131,0.649604114888975,2.50637373934474,2.58285761215644,0.841368146639782,1.9199638532695,1.71642964911851,1.67654974641,2.21817607301049,2.72882066071307,1.6356013078856,2.22066114144981,4.53460767230423,0,0.538283139656854,0.671538465456314,9.85266929564171,3.75364950902364,1.46521299413812,4.71610433973945,11.5361583928134,1.6942555278512,0.920650473014354,1.14579102687879,1.89038500578056,0.685082519770642,0.755393897389701,0.675022500231806,0,1.81256963593682,1.03552062350364,0.62272408550506,0.798049746802062,1.53660245178721,1.70174701947806,2.30574478890781,4.77993121970037,3.11145418922261,2.26638562962784,3.53011130550997,5.05394423527595,4.05566879824384,2.64076877940507,3.27745276144588,2.88113185821912,3.33125719942557,2.85776214769844,3.24476112645595,2.89363830695558,4.53294490883637,3.23837624295674,3.08582327146874,3.37204031702741,3.57654284920981,3.0522747492789,3.29382831453657,2.70766745253365,2.92684756596436,3.41990624869196,3.53090695999241,5.05028044491965,4.74540072496697,2.85662998889134,4.50154147486658,2.63392630016142,3.85813221962283,3.2475375131933,3.97683734357194,6.44613162144895,2.29545998482612,3.30887128679273,2.31867835620421 | |phase1_expression=1.44133962394315,5.23463111459042,5.45999087267443,2.41971369045464,2.00358291978539,3.3575854382378,4.67225281191051,6.19791952519566,0.140788722151667,0.468129052643987,0.34243593645101,0.159544317990673,7.87523357683546,4.72070173062586,3.33109761815663,3.03712901084739,0.699561878128147,7.41336088591859,7.54129384831563,3.39511721438424,3.23164502574065,0.695036658406197,0.261199789138935,6.07971206614945,7.57050627521661,2.8711598205751,2.15380998079537,4.09395342103189,7.03086651988583,5.04060259519861,6.87364583031445,2.54012269383853,0,0,2.88851619751275,1.66234645358492,0.408338712524738,15.0671387065287,7.813353445238,8.37637990358077,15.2940186888064,13.6609096991689,14.0798002379035,1.38486499773135,1.72340783073175,1.46837401729345,3.9119567217402,4.36050312760893,0.659058548203415,1.55543919259427,4.19959264876088,4.31257693094915,4.69791296961662,6.5282592781021,3.02484419228218,1.80081605225163,2.0057340795713,1.03134418455488,2.22548106945558,3.1739458756322,3.80298842103708,2.03306719241479,3.55717918444456,2.6996991518442,3.9554654502679,3.5524005747305,1.79760066311043,2.68952813725088,3.11068836925433,4.59020190327748,4.41682418837902,1.42825492201902,3.09215957332259,3.06226998037385,3.25874601462004,2.75765635983006,6.60695285996332,2.55374676170375,1.0752457327937,4.3522474950964,5.12330804173494,4.16730696445408,3.35019598801657,2.25105044012672,1.5279824777681,2.65165726926301,1.70846016958924,1.67759501242771,1.59025005999687,2.11600368298999,5.79728977403356,6.88339101585109,10.879541339324,11.3337670243942,11.695975514058,6.72040330646003,4.77511028447956,1.02258193546835,0.519572009205738,1.06001872353102,1.12674735821344,1.28326477414318,0,0,1.94841936910093,2.02687892380079,1.01104889002957,4.45317130904334,7.76813650941515,2.67195850316685,1.73485326766136,1.52232739156071,1.38369298353635,1.50722640552623,2.82212897125692,2.01066546127481,16.0676729027343,2.60278842455841,0.884610551949874,2.10296904931632,1.98757366614354,1.93950101254089,11.1835056730873,4.68449275218475,5.44561437714983,3.83185582812887,2.63593273913025,0.599902730993408,1.52484272487678,2.39665023047716,1.83000241127451,2.38743269014442,1.39059456153821,1.27857728665165,2.0778804455956,1.94689515681309,1.83310854930569,1.99051152976149,0.758168275301024,1.89397670297827,0.650602214813519,2.06911893990126,1.0803727788321,1.35634336052144,1.42876648217788,1.15302348256365,1.49922759295566,1.29351685369508,0.646703978798527,1.51284864134255,1.40760899331159,1.97276159184817,3.61461423993277,4.52727816478817,5.35033554660653,1.79130840136644,0.702213187313235,1.28673953557358,1.42081749697796,1.03562886267751,1.17263029990548,1.44049649168812,0.946978942340841,0.787056926989615,1.69693824176116,2.09280550275367,2.41446061259657,1.86824547787471,1.31647879930784,1.97000956894914,3.72916523910936,3.21639972335731,1.75640092232841,3.48936688776967,1.26173969138476,2.36680608472354,3.96502539580558,3.96675849995316,1.91959425481711,0.464473343720877,2.70621668776396,2.21851877085677,2.44615848229357,3.42406127002606,2.84717436926707,2.47048432086016,4.27269854960458,3.38226002469956,3.8992817423824,0,4.32276099749388,3.98282546508734,1.51734320762465,1.82797620175566,0,0.610953983535943,0.969762435838129,2.45475369616115,2.59269802209455,3.09981310757165,2.66897837330337,3.20832626196681,9.19003143970162,1.33476084572875,2.75182593158484,1.34917267430912,1.21716072833102,3.13530307678142,3.8193877767213,8.63088412352432,8.59316701907687,11.2570179407113,8.62609239164127,12.2806512730606,13.7296576170407,11.6186283855671,13.4548060141434,14.473305640901,8.49864674766381,1.13694847062291,2.77040459951444,2.20668611507745,3.28566347603903,7.20276906999808,7.61739650835244,12.2934198150413,7.88175720530955,6.86540537911202,6.05928120898451,6.55453258862952,11.2245238212832,11.1379775107764,4.52373851817817,3.80733978673097,1.96705709207614,1.10374698521893,2.72936002979246,1.28932855251423,0.655739781506702,3.28212205365685,0.94652465824877,1.56175497718655,1.29254038639679,0.477937595905104,1.11399337041197,1.13230612315533,0,0.876767573733936,0.790575555893047,3.85585579706168,2.55492153374884,0.890328018336276,2.28041743095006,3.13443233647817,6.63725691699814,3.39892890616974,3.32555912661226,5.84675747243284,8.85905678642318,5.84126781093462,4.9101375701962,3.99887102425256,3.56497378384721,4.42451461110142,8.4334886859999,11.3449097573006,4.42571487479924,1.98067203434441,1.03486947026204,2.7863814554107,2.30542303734956,4.28085162244969,3.29098041204242,4.87143918583359,1.87737366450968,4.02480934641258,10.8058915046931,4.28704257647848,4.68246837418126,3.98065304525829,3.46179797609096,3.11867709515616,2.91480836629851,1.8542530201051,3.93003025835061,2.47664241555867,2.40752885580625,2.44878994106098,2.7338845544205,2.97411625168479,4.75939603982795,3.63873776041511,6.90999869022119,7.63736494412091,2.84702394223022,3.65975040828328,4.96824567780286,4.80903080833278,4.58561383866973,7.01294601201068,5.78574190077352,5.75863072364865,5.70305882483889,3.72803587852155,0.56369293868419,1.79419855252775,2.15096037594227,3.88902376688095,1.54991788173277,1.68956125490778,1.76035857968631,1.43224823328345,1.25831213310853,0.966336483304024,1.15212002503146,3.79213344753814,1.41907650703115,1.1298205288131,0.649604114888975,2.50637373934474,2.58285761215644,0.841368146639782,1.9199638532695,1.71642964911851,1.67654974641,2.21817607301049,2.72882066071307,1.6356013078856,2.22066114144981,4.53460767230423,0,0.538283139656854,0.671538465456314,9.85266929564171,3.75364950902364,1.46521299413812,4.71610433973945,11.5361583928134,1.6942555278512,0.920650473014354,1.14579102687879,1.89038500578056,0.685082519770642,0.755393897389701,0.675022500231806,0,1.81256963593682,1.03552062350364,0.62272408550506,0.798049746802062,1.53660245178721,1.70174701947806,2.30574478890781,4.77993121970037,3.11145418922261,2.26638562962784,3.53011130550997,5.05394423527595,4.05566879824384,2.64076877940507,3.27745276144588,2.88113185821912,3.33125719942557,2.85776214769844,3.24476112645595,2.89363830695558,4.53294490883637,3.23837624295674,3.08582327146874,3.37204031702741,3.57654284920981,3.0522747492789,3.29382831453657,2.70766745253365,2.92684756596436,3.41990624869196,3.53090695999241,5.05028044491965,4.74540072496697,2.85662998889134,4.50154147486658,2.63392630016142,3.85813221962283,3.2475375131933,3.97683734357194,6.44613162144895,2.29545998482612,3.30887128679273,2.31867835620421 | ||
|short_description=p4@Fam63a | |short_description=p4@Fam63a | ||
}} | }} |
Latest revision as of 23:13, 25 September 2015
Short description: | p4@Fam63a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Fam63a_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_133858, NM_199475, uc008qjb.1, uc008qjc.1, uc008qjd.2, uc008qje.2_5end |
EntrezGene: | Fam63a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
digestive tract diverticulum | 1.27e-07 | 23 |
sac | 1.27e-07 | 23 |
digestive system | 2.91e-07 | 116 |
digestive tract | 2.91e-07 | 116 |
primitive gut | 2.91e-07 | 116 |
endoderm-derived structure | 2.92e-07 | 118 |
endoderm | 2.92e-07 | 118 |
presumptive endoderm | 2.92e-07 | 118 |
liver | 4.39e-07 | 22 |
epithelial sac | 4.39e-07 | 22 |
digestive gland | 4.39e-07 | 22 |
epithelium of foregut-midgut junction | 4.39e-07 | 22 |
anatomical boundary | 4.39e-07 | 22 |
hepatobiliary system | 4.39e-07 | 22 |
foregut-midgut junction | 4.39e-07 | 22 |
hepatic diverticulum | 4.39e-07 | 22 |
liver primordium | 4.39e-07 | 22 |
septum transversum | 4.39e-07 | 22 |
liver bud | 4.39e-07 | 22 |
trunk | 9.77e-07 | 90 |