FFCP PHASE1:Mm9::chr11:90252223..90252240,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr11:90252223..90252240,-
|short_description=p1@Hlf
|description=CAGE_peak_1_at_Hlf_5end
|association_with_transcript=0bp_to_ENSMUST00000107883,NM_172563,uc007...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=217082 | |EntrezGene=217082 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1593 | |||
|TSSclassifier=NA | |||
|UniProt=Q5SVU5,Q5SVU4,Q8BW74 | |UniProt=Q5SVU5,Q5SVU4,Q8BW74 | ||
|association_with_transcript=0bp_to_ENSMUST00000107883,NM_172563,uc007kws.1_5end | |||
|cluster_id=chr11:90252223..90252240,- | |||
|description=CAGE_peak_1_at_Hlf_5end | |||
|id=chr11:90252223..90252240,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004111!1.88e-16!122;UBERON:0000025!8.91e-15!114;UBERON:0000033!1.94e-14!63;UBERON:0002346!4.28e-13!71;UBERON:0003075!4.28e-13!71;UBERON:0007284!4.28e-13!71;UBERON:0004121!5.37e-13!102;UBERON:0000924!5.37e-13!102;UBERON:0006601!5.37e-13!102;UBERON:0000955!5.27e-12!50;UBERON:0006238!5.27e-12!50;UBERON:0002616!1.86e-11!49;UBERON:0001049!7.23e-11!52;UBERON:0005068!7.23e-11!52;UBERON:0006241!7.23e-11!52;UBERON:0007135!7.23e-11!52;UBERON:0003056!1.29e-10!49;UBERON:0001017!1.25e-09!73;UBERON:0005743!1.25e-09!73;UBERON:0000073!1.08e-08!75;UBERON:0001016!1.08e-08!75;UBERON:0003080!1.68e-08!40;UBERON:0002780!5.70e-08!39;UBERON:0001890!5.70e-08!39;UBERON:0006240!5.70e-08!39 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004111,2.21e-16,122;UBERON:0010314,6.71e-15,92;UBERON:0000025,1.05e-14,114;UBERON:0010371,1.44e-14,73;UBERON:0002346,1.61e-12,64;UBERON:0003075,1.61e-12,64;UBERON:0007284,1.61e-12,64;UBERON:0004121,3.57e-12,95;UBERON:0000924,3.57e-12,95;UBERON:0006601,3.57e-12,95;UBERON:0000073,6.52e-12,54;UBERON:0001049,9.01e-11,52;UBERON:0005068,9.01e-11,52;UBERON:0006241,9.01e-11,52;UBERON:0007135,9.01e-11,52;UBERON:0003056,1.65e-10,49;UBERON:0000955,2.63e-10,47;UBERON:0006238,2.63e-10,47;UBERON:0002616,8.81e-10,46;UBERON:0001017,1.48e-09,73;UBERON:0001016,1.44e-08,75;UBERON:0003080,2.17e-08,40;UBERON:0002780,7.31e-08,39;UBERON:0001890,7.31e-08,39;UBERON:0006240,7.31e-08,39 | |||
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| ||
|short_description=p1@Hlf | |||
}} | }} |
Latest revision as of 23:13, 25 September 2015
Short description: | p1@Hlf |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Hlf_5end |
Coexpression cluster: | MCL_coexpression_mm9:1593 |
Association with transcript: | 0bp_to_ENSMUST00000107883, NM_172563, uc007kws.1_5end |
EntrezGene: | Hlf |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
anatomical conduit | 2.21e-16 | 122 |
structure with developmental contribution from neural crest | 6.71e-15 | 92 |
tube | 1.05e-14 | 114 |
ecto-epithelium | 1.44e-14 | 73 |
neurectoderm | 1.61e-12 | 64 |
neural plate | 1.61e-12 | 64 |
presumptive neural plate | 1.61e-12 | 64 |
ectoderm-derived structure | 3.57e-12 | 95 |
ectoderm | 3.57e-12 | 95 |
presumptive ectoderm | 3.57e-12 | 95 |
regional part of nervous system | 6.52e-12 | 54 |
neural tube | 9.01e-11 | 52 |
neural rod | 9.01e-11 | 52 |
future spinal cord | 9.01e-11 | 52 |
neural keel | 9.01e-11 | 52 |
pre-chordal neural plate | 1.65e-10 | 49 |
brain | 2.63e-10 | 47 |
future brain | 2.63e-10 | 47 |
regional part of brain | 8.81e-10 | 46 |
central nervous system | 1.48e-09 | 73 |
nervous system | 1.44e-08 | 75 |
anterior neural tube | 2.17e-08 | 40 |
regional part of forebrain | 7.31e-08 | 39 |
forebrain | 7.31e-08 | 39 |
future forebrain | 7.31e-08 | 39 |