FFCP PHASE1:Mm9::chr11:90110740..90110762,+: Difference between revisions
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{{FFCP|EntrezGene=67468|HGNC=|MCL_coexpression_id=13|UniProt=Q9CQY7|association_with_transcript=-7bp_to_ENSMUST00000107887_5end|description=CAGE_peak_3_at_Mmd_5end|id=chr11:90110740..90110762,+|ontology_enrichment_celltype=CL:0000117!2.34e-15!23;CL:0000337!2.34e-15!23;CL:0000221!8.44e-13!44;CL:0000133!8.44e-13!44;CL:0000540!1.14e-12!33;CL:0000047!1.14e-12!33;CL:0000031!1.14e-12!33;CL:0000404!1.14e-12!33;CL:0002319!2.22e-12!43;CL:0000055!1.50e-09!50;CL:0000393!3.89e-09!39;CL:0000211!3.89e-09!39|ontology_enrichment_celltype_v019_2=CL:0000117,8.20e-17,23;CL:0000337,8.20e-17,23;CL:0000221,1.64e-13,44;CL:0000133,1.64e-13,44;CL:0000540,1.69e-13,33;CL:0000047,1.69e-13,33;CL:0000031,1.69e-13,33;CL:0000404,1.69e-13,33;CL:0002319,4.74e-13,43;CL:0000393,4.46e-10,39;CL:0000211,4.46e-10,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!4.31e-24!73;UBERON:0005743!4.31e-24!73;UBERON:0000073!1.58e-23!75;UBERON:0001016!1.58e-23!75;UBERON:0004121!5.39e-20!102;UBERON:0000924!5.39e-20!102;UBERON:0006601!5.39e-20!102;UBERON:0002020!1.77e-19!34;UBERON:0001049!1.79e-19!52;UBERON:0005068!1.79e-19!52;UBERON:0006241!1.79e-19!52;UBERON:0007135!1.79e-19!52;UBERON:0002346!8.70e-19!71;UBERON:0003075!8.70e-19!71;UBERON:0007284!8.70e-19!71;UBERON:0000033!2.55e-18!63;UBERON:0000955!7.51e-18!50;UBERON:0006238!7.51e-18!50;UBERON:0002616!2.06e-17!49;UBERON:0003056!3.73e-16!49;UBERON:0002791!4.42e-16!29;UBERON:0003528!4.42e-16!29;UBERON:0001893!4.42e-16!29;UBERON:0003080!2.18e-15!40;UBERON:0002780!4.10e-15!39;UBERON:0001890!4.10e-15!39;UBERON:0006240!4.10e-15!39;UBERON:0000956!2.40e-11!21;UBERON:0001869!2.40e-11!21;UBERON:0000203!2.40e-11!21;UBERON:0002619!3.65e-09!17;UBERON:0007811!3.27e-08!86;UBERON:0000153!3.25e-07!94;UBERON:0002021!5.07e-07!10;UBERON:0000411!5.07e-07!10;UBERON:0001950!5.07e-07!10;UBERON:0000025!9.79e-07!114|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.77e-26,73;UBERON:0001016,8.78e-25,75;UBERON:0002346,1.63e-22,64;UBERON:0003075,1.63e-22,64;UBERON:0007284,1.63e-22,64;UBERON:0000073,1.74e-22,54;UBERON:0004121,1.24e-21,95;UBERON:0000924,1.24e-21,95;UBERON:0006601,1.24e-21,95;UBERON:0002020,3.56e-21,34;UBERON:0001049,4.57e-21,52;UBERON:0005068,4.57e-21,52;UBERON:0006241,4.57e-21,52;UBERON:0007135,4.57e-21,52;UBERON:0010371,1.50e-19,73;UBERON:0003528,2.00e-17,29;UBERON:0002791,2.00e-17,29;UBERON:0001893,2.00e-17,29;UBERON:0000955,2.11e-17,47;UBERON:0006238,2.11e-17,47;UBERON:0010314,2.75e-17,92;UBERON:0003056,3.98e-17,49;UBERON:0002616,6.27e-17,46;UBERON:0003080,3.93e-16,40;UBERON:0002780,7.90e-16,39;UBERON:0001890,7.90e-16,39;UBERON:0006240,7.90e-16,39;UBERON:0000956,3.38e-12,21;UBERON:0001869,3.38e-12,21;UBERON:0000203,3.38e-12,21;UBERON:0002619,8.64e-10,17;UBERON:0000025,5.16e-08,114;UBERON:0002021,1.34e-07,10;UBERON:0000411,1.34e-07,10;UBERON:0001950,1.34e-07,10;UBERON:0004111,8.37e-07,122|phase1_expression=1.60148847104794,0.348975407639361,0,1.81478526784098,0.500895729946347,0.503637815735669,0.700837921786577,0.774739940649458,0.281577444303333,0.468129052643987,0.68487187290202,0.8774937489487,0.684802919724823,0.437102012094987,0.999329285446988,0.404950534779652,0,1.26184866143295,0.959801035240171,1.69755860719212,4.25216450755349,0.496454756004426,0.261199789138935,0.639969691173627,0.45881856213434,0,0.430761996159075,0.430942465371778,0.190023419456374,1.00812051903972,0.221730510655305,0,0,0,1.73310971850765,0.664938581433969,1.02084678131185,1.67412652294763,0.7813353445238,0.523523743973798,1.76469446409304,0.683045484958446,0,0,0.405507724878058,0.734187008646726,0,3.70642765846759,0.659058548203415,2.13872888981712,1.53985063787899,7.18762821824858,0.503347818173209,0.725362142011344,0.672187598284928,1.28629718017973,0.286533439938757,1.03134418455488,22.8617600771345,20.1016572123373,27.2547503507657,3.04960078862219,3.55717918444456,4.04954872776629,0.988866362566974,2.8419204597844,2.39680088414724,4.99483796918021,10.1615820062308,9.04539786822327,8.62332341540666,16.2821061110168,13.693849539,10.9016811301309,13.4183659425531,17.4651569455904,6.60695285996332,10.4703617229854,11.8277030607307,14.1118327871307,32.0206752608434,15.106487746146,9.49222196604695,7.87867654044352,11.1542720877071,11.490514833473,20.786265396669,16.5895506784518,1.06016670666458,0.982430281388212,0.289864488701678,1.72084775396277,0,3.2382191498269,1.29955283489534,0,1.40444420131752,0.852151612890289,0.519572009205738,1.41335829804136,3.38024207464033,1.28326477414318,0,0,0.649473123033642,0.253359865475099,1.01104889002957,1.37020655662872,0.258937883647172,0.890652834388949,1.56136794089522,0,1.38369298353635,0.753613202763113,1.17588707135705,1.63366568728578,0.741584903203122,1.44599356919912,0,0.970601099684455,1.98757366614354,0,1.86391761218122,1.46390398505774,2.93225389538837,0.766371165625774,0.838705871541442,2.39961092397363,1.65191295194984,2.09706895166752,9.60751265919116,8.29318723944905,13.3844726548053,10.4843337505436,3.94797284663164,5.02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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=67468 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt=Q9CQY7 | |||
|association_with_transcript=-7bp_to_ENSMUST00000107887_5end | |||
|cluster_id=chr11:90110740..90110762,+ | |||
|description=CAGE_peak_3_at_Mmd_5end | |||
|id=chr11:90110740..90110762,+ | |||
|ontology_enrichment_celltype=CL:0000117!2.34e-15!23;CL:0000337!2.34e-15!23;CL:0000221!8.44e-13!44;CL:0000133!8.44e-13!44;CL:0000540!1.14e-12!33;CL:0000047!1.14e-12!33;CL:0000031!1.14e-12!33;CL:0000404!1.14e-12!33;CL:0002319!2.22e-12!43;CL:0000055!1.50e-09!50;CL:0000393!3.89e-09!39;CL:0000211!3.89e-09!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,8.20e-17,23;CL:0000337,8.20e-17,23;CL:0000221,1.64e-13,44;CL:0000133,1.64e-13,44;CL:0000540,1.69e-13,33;CL:0000047,1.69e-13,33;CL:0000031,1.69e-13,33;CL:0000404,1.69e-13,33;CL:0002319,4.74e-13,43;CL:0000393,4.46e-10,39;CL:0000211,4.46e-10,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.31e-24!73;UBERON:0005743!4.31e-24!73;UBERON:0000073!1.58e-23!75;UBERON:0001016!1.58e-23!75;UBERON:0004121!5.39e-20!102;UBERON:0000924!5.39e-20!102;UBERON:0006601!5.39e-20!102;UBERON:0002020!1.77e-19!34;UBERON:0001049!1.79e-19!52;UBERON:0005068!1.79e-19!52;UBERON:0006241!1.79e-19!52;UBERON:0007135!1.79e-19!52;UBERON:0002346!8.70e-19!71;UBERON:0003075!8.70e-19!71;UBERON:0007284!8.70e-19!71;UBERON:0000033!2.55e-18!63;UBERON:0000955!7.51e-18!50;UBERON:0006238!7.51e-18!50;UBERON:0002616!2.06e-17!49;UBERON:0003056!3.73e-16!49;UBERON:0002791!4.42e-16!29;UBERON:0003528!4.42e-16!29;UBERON:0001893!4.42e-16!29;UBERON:0003080!2.18e-15!40;UBERON:0002780!4.10e-15!39;UBERON:0001890!4.10e-15!39;UBERON:0006240!4.10e-15!39;UBERON:0000956!2.40e-11!21;UBERON:0001869!2.40e-11!21;UBERON:0000203!2.40e-11!21;UBERON:0002619!3.65e-09!17;UBERON:0007811!3.27e-08!86;UBERON:0000153!3.25e-07!94;UBERON:0002021!5.07e-07!10;UBERON:0000411!5.07e-07!10;UBERON:0001950!5.07e-07!10;UBERON:0000025!9.79e-07!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.77e-26,73;UBERON:0001016,8.78e-25,75;UBERON:0002346,1.63e-22,64;UBERON:0003075,1.63e-22,64;UBERON:0007284,1.63e-22,64;UBERON:0000073,1.74e-22,54;UBERON:0004121,1.24e-21,95;UBERON:0000924,1.24e-21,95;UBERON:0006601,1.24e-21,95;UBERON:0002020,3.56e-21,34;UBERON:0001049,4.57e-21,52;UBERON:0005068,4.57e-21,52;UBERON:0006241,4.57e-21,52;UBERON:0007135,4.57e-21,52;UBERON:0010371,1.50e-19,73;UBERON:0003528,2.00e-17,29;UBERON:0002791,2.00e-17,29;UBERON:0001893,2.00e-17,29;UBERON:0000955,2.11e-17,47;UBERON:0006238,2.11e-17,47;UBERON:0010314,2.75e-17,92;UBERON:0003056,3.98e-17,49;UBERON:0002616,6.27e-17,46;UBERON:0003080,3.93e-16,40;UBERON:0002780,7.90e-16,39;UBERON:0001890,7.90e-16,39;UBERON:0006240,7.90e-16,39;UBERON:0000956,3.38e-12,21;UBERON:0001869,3.38e-12,21;UBERON:0000203,3.38e-12,21;UBERON:0002619,8.64e-10,17;UBERON:0000025,5.16e-08,114;UBERON:0002021,1.34e-07,10;UBERON:0000411,1.34e-07,10;UBERON:0001950,1.34e-07,10;UBERON:0004111,8.37e-07,122 | |||
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| |||
|short_description=p3@Mmd | |||
}} |
Latest revision as of 23:07, 25 September 2015
Short description: | p3@Mmd |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Mmd_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | -7bp_to_ENSMUST00000107887_5end |
EntrezGene: | Mmd |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 8.20e-17 | 23 |
neuroblast (sensu Vertebrata) | 8.20e-17 | 23 |
ectodermal cell | 1.64e-13 | 44 |
neurectodermal cell | 1.64e-13 | 44 |
neuron | 1.69e-13 | 33 |
neuronal stem cell | 1.69e-13 | 33 |
neuroblast | 1.69e-13 | 33 |
electrically signaling cell | 1.69e-13 | 33 |
neural cell | 4.74e-13 | 43 |
electrically responsive cell | 4.46e-10 | 39 |
electrically active cell | 4.46e-10 | 39 |