FFCP PHASE1:Mm9::chr10:32609886..32609978,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=432450 | |EntrezGene=432450 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |MCL_coexpression_id=1 | ||
|TSSclassifier=NA | |||
|UniProt=Q4PNJ2 | |UniProt=Q4PNJ2 | ||
|association_with_transcript=-165bp_to_NM_001013411,NM_001025286,uc007etw.2,uc007ety.2_5end | |association_with_transcript=-165bp_to_NM_001013411,NM_001025286,uc007etw.2,uc007ety.2_5end | ||
|cluster_id=chr10:32609886..32609978,- | |||
|description=CAGE_peak_1_at_Nkain2_5end | |description=CAGE_peak_1_at_Nkain2_5end | ||
|id=chr10:32609886..32609978,- | |id=chr10:32609886..32609978,- | ||
|ontology_enrichment_celltype=CL:0000393!1.36e-18!39;CL:0000211!1.36e-18!39;CL:0000540!4.44e-17!33;CL:0000047!4.44e-17!33;CL:0000031!4.44e-17!33;CL:0000404!4.44e-17!33;CL:0000055!8.12e-17!50;CL:0000221!1.24e-16!44;CL:0000133!1.24e-16!44;CL:0002319!4.97e-16!43;CL:0000117!1.43e-12!23;CL:0000337!1.43e-12!23;CL:0002321!9.78e-07!70;CL:0000220!9.78e-07!70 | |ontology_enrichment_celltype=CL:0000393!1.36e-18!39;CL:0000211!1.36e-18!39;CL:0000540!4.44e-17!33;CL:0000047!4.44e-17!33;CL:0000031!4.44e-17!33;CL:0000404!4.44e-17!33;CL:0000055!8.12e-17!50;CL:0000221!1.24e-16!44;CL:0000133!1.24e-16!44;CL:0002319!4.97e-16!43;CL:0000117!1.43e-12!23;CL:0000337!1.43e-12!23;CL:0002321!9.78e-07!70;CL:0000220!9.78e-07!70 | ||
|ontology_enrichment_celltype_v019_2=CL:0000393,4.77e-24,39;CL:0000211,4.77e-24,39;CL:0000540,1.10e-22,33;CL:0000047,1.10e-22,33;CL:0000031,1.10e-22,33;CL:0000404,1.10e-22,33;CL:0000221,9.63e-21,44;CL:0000133,9.63e-21,44;CL:0002319,6.15e-20,43;CL:0000117,1.53e-16,23;CL:0000337,1.53e-16,23;CL:0002321,1.71e-11,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!8.22e-31!75;UBERON:0001016!8.22e-31!75;UBERON:0001017!8.04e-30!73;UBERON:0005743!8.04e-30!73;UBERON:0004121!4.59e-26!102;UBERON:0000924!4.59e-26!102;UBERON:0006601!4.59e-26!102;UBERON:0001049!2.09e-21!52;UBERON:0005068!2.09e-21!52;UBERON:0006241!2.09e-21!52;UBERON:0007135!2.09e-21!52;UBERON:0002346!7.04e-21!71;UBERON:0003075!7.04e-21!71;UBERON:0007284!7.04e-21!71;UBERON:0000955!1.74e-20!50;UBERON:0006238!1.74e-20!50;UBERON:0000033!4.68e-20!63;UBERON:0002020!6.37e-20!34;UBERON:0002616!9.98e-20!49;UBERON:0002791!2.70e-17!29;UBERON:0003528!2.70e-17!29;UBERON:0001893!2.70e-17!29;UBERON:0003080!3.80e-17!40;UBERON:0003056!1.30e-16!49;UBERON:0002780!1.57e-16!39;UBERON:0001890!1.57e-16!39;UBERON:0006240!1.57e-16!39;UBERON:0000956!9.12e-13!21;UBERON:0001869!9.12e-13!21;UBERON:0000203!9.12e-13!21;UBERON:0002619!1.23e-10!17;UBERON:0007811!1.45e-08!86;UBERON:0000025!2.00e-08!114;UBERON:0000468!3.07e-08!333;UBERON:0002021!5.18e-08!10;UBERON:0000411!5.18e-08!10;UBERON:0001950!5.18e-08!10;UBERON:0004111!7.74e-08!122;UBERON:0000153!5.21e-07!94 | |ontology_enrichment_uberon=UBERON:0000073!8.22e-31!75;UBERON:0001016!8.22e-31!75;UBERON:0001017!8.04e-30!73;UBERON:0005743!8.04e-30!73;UBERON:0004121!4.59e-26!102;UBERON:0000924!4.59e-26!102;UBERON:0006601!4.59e-26!102;UBERON:0001049!2.09e-21!52;UBERON:0005068!2.09e-21!52;UBERON:0006241!2.09e-21!52;UBERON:0007135!2.09e-21!52;UBERON:0002346!7.04e-21!71;UBERON:0003075!7.04e-21!71;UBERON:0007284!7.04e-21!71;UBERON:0000955!1.74e-20!50;UBERON:0006238!1.74e-20!50;UBERON:0000033!4.68e-20!63;UBERON:0002020!6.37e-20!34;UBERON:0002616!9.98e-20!49;UBERON:0002791!2.70e-17!29;UBERON:0003528!2.70e-17!29;UBERON:0001893!2.70e-17!29;UBERON:0003080!3.80e-17!40;UBERON:0003056!1.30e-16!49;UBERON:0002780!1.57e-16!39;UBERON:0001890!1.57e-16!39;UBERON:0006240!1.57e-16!39;UBERON:0000956!9.12e-13!21;UBERON:0001869!9.12e-13!21;UBERON:0000203!9.12e-13!21;UBERON:0002619!1.23e-10!17;UBERON:0007811!1.45e-08!86;UBERON:0000025!2.00e-08!114;UBERON:0000468!3.07e-08!333;UBERON:0002021!5.18e-08!10;UBERON:0000411!5.18e-08!10;UBERON:0001950!5.18e-08!10;UBERON:0004111!7.74e-08!122;UBERON:0000153!5.21e-07!94 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.34e-36,75;UBERON:0001017,2.78e-35,73;UBERON:0004121,2.65e-27,95;UBERON:0000924,2.65e-27,95;UBERON:0006601,2.65e-27,95;UBERON:0000073,2.74e-27,54;UBERON:0002020,1.45e-26,34;UBERON:0001049,7.81e-26,52;UBERON:0005068,7.81e-26,52;UBERON:0006241,7.81e-26,52;UBERON:0007135,7.81e-26,52;UBERON:0002346,1.70e-23,64;UBERON:0003075,1.70e-23,64;UBERON:0007284,1.70e-23,64;UBERON:0003528,5.56e-23,29;UBERON:0002791,5.56e-23,29;UBERON:0001893,5.56e-23,29;UBERON:0000955,2.91e-22,47;UBERON:0006238,2.91e-22,47;UBERON:0002616,2.75e-21,46;UBERON:0010371,1.33e-20,73;UBERON:0003080,1.30e-19,40;UBERON:0002780,8.33e-19,39;UBERON:0001890,8.33e-19,39;UBERON:0006240,8.33e-19,39;UBERON:0000956,8.28e-17,21;UBERON:0001869,8.28e-17,21;UBERON:0000203,8.28e-17,21;UBERON:0003056,8.05e-16,49;UBERON:0010314,2.20e-14,92;UBERON:0002619,6.57e-14,17;UBERON:0002021,2.42e-10,10;UBERON:0000411,2.42e-10,10;UBERON:0001950,2.42e-10,10;UBERON:0000010,1.37e-07,11;UBERON:0002420,2.73e-07,8;UBERON:0007245,2.73e-07,8;UBERON:0010009,2.73e-07,8;UBERON:0010011,2.73e-07,8;UBERON:0000454,2.73e-07,8;UBERON:0003076,9.19e-07,12;UBERON:0003057,9.19e-07,12 | |||
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|short_description=p1@Nkain2 | |short_description=p1@Nkain2 | ||
}} | }} |
Latest revision as of 22:59, 25 September 2015
Short description: | p1@Nkain2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Nkain2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -165bp_to_NM_001013411, NM_001025286, uc007etw.2, uc007ety.2_5end |
EntrezGene: | Nkain2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 4.77e-24 | 39 |
electrically active cell | 4.77e-24 | 39 |
neuron | 1.10e-22 | 33 |
neuronal stem cell | 1.10e-22 | 33 |
neuroblast | 1.10e-22 | 33 |
electrically signaling cell | 1.10e-22 | 33 |
ectodermal cell | 9.63e-21 | 44 |
neurectodermal cell | 9.63e-21 | 44 |
neural cell | 6.15e-20 | 43 |
CNS neuron (sensu Vertebrata) | 1.53e-16 | 23 |
neuroblast (sensu Vertebrata) | 1.53e-16 | 23 |
embryonic cell | 1.71e-11 | 70 |