Personal tools

FFCP PHASE1:Mm9::chr2:153475178..153475196,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(6 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=13436
|EntrezGene=13436
|HGNC=
|HGNC=
|MCL_coexpression_id=97
|TSSclassifier=NA
|UniProt=Q3KR45,O88509,A2AU59,A2AU58,Q541E5,A2AU57
|UniProt=Q3KR45,O88509,A2AU59,A2AU58,Q541E5,A2AU57
|association_with_transcript=0bp_to_ENSMUST00000056495,ENSMUST00000072997,ENSMUST00000081628,ENSMUST00000088976,ENSMUST00000103150,ENSMUST00000103151,ENSMUST00000109772,ENSMUST00000109773,ENSMUST00000109774,NM_001003960,NM_001003961,NM_001003963,NM_001122997,NM_010068,uc008nib.2,uc008nic.2,uc008nid.2,uc008nie.2,uc008nif.2,uc008nig.2,uc008nih.2,uc008nii.2,uc008nij.2_5end
|association_with_transcript=0bp_to_ENSMUST00000056495,ENSMUST00000072997,ENSMUST00000081628,ENSMUST00000088976,ENSMUST00000103150,ENSMUST00000103151,ENSMUST00000109772,ENSMUST00000109773,ENSMUST00000109774,NM_001003960,NM_001003961,NM_001003963,NM_001122997,NM_010068,uc008nib.2,uc008nic.2,uc008nid.2,uc008nie.2,uc008nif.2,uc008nig.2,uc008nih.2,uc008nii.2,uc008nij.2_5end
|cluster_id=chr2:153475178..153475196,+
|description=CAGE_peak_1_at_Dnmt3b_5end
|description=CAGE_peak_1_at_Dnmt3b_5end
|id=chr2:153475178..153475196,+
|id=chr2:153475178..153475196,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0005057!1.32e-07!51;UBERON:0002368!9.40e-07!60
|ontology_enrichment_uberon_v019_2=UBERON:0002368,4.48e-08,60;UBERON:0000949,7.50e-08,72;UBERON:0003929,9.46e-08,55;UBERON:0005911,1.57e-07,69;UBERON:0001048,4.55e-07,134
|phase1_expression=1.92178616525753,0,0,0,0,1.34303417529512,1.63528848416868,0.516493293766305,10.6999428835267,8.66038747391376,3.4243593645101,4.06838010876216,0.171200729931206,0.262261207256992,2.33176833270964,0.809901069559304,0,0.473193248037357,0.411343300817216,2.54633791078818,0.425216450755349,22.7376278250027,23.7691808116431,1.27993938234725,0.22940928106717,0.57423196411502,0.86152399231815,0.646413698057667,0,0,0.665191531965914,1.27006134691926,2.46025915033828,0,1.73310971850765,1.49611180822643,2.45003227514843,0.418531630736908,0,0,0,0,0,0.377690453926732,0.709638518536602,0,0,0.218025156380447,0.659058548203415,0.194429899074283,0.139986421625363,0,0.671130424230945,1.45072428402269,2.35265659399725,0,0,0,0.404632921719196,1.05798195854407,1.26766280701236,0,0.889294796111139,0,0,0,0,0.384218305321555,1.24427534770173,1.62007125998029,0.841299845405528,0.285650984403804,0.220868540951614,0.61245399607477,0.862609239164127,1.83843757322004,0,0,0,1.45074916503213,1.00636407962651,0.52091337055676,0.279182999001381,0,0,1.17851434189467,0.711858403995515,0.372798891650601,0.454357159999104,0.226714680320357,2.02905142091174,1.72084775396277,1.3599426674155,1.61910957491345,0,0,0.280888840263504,0.170430322578058,0.779358013808606,0.35333957451034,0.704217098883403,0,0,0,0.216491041011214,0.760079596425296,1.51657333504435,0.11418387971906,0,0.148442139064825,3.99016251562112,2.43572382649713,0.691846491768175,0.452167921657868,1.41106448562846,0.376999773989026,0.247194967734374,0.433798070759735,1.76922110389975,1.94120219936891,0.883366073841574,2.42437626567611,0,0,0,0.255457055208591,7.54835284387298,8.99854096490112,6.98886248901856,0.149790639404823,0.457500602818626,0.376963056338593,0.173824320192276,0,0.20778804455956,0.162241263067758,1.62942982160506,0.622034853050465,0.505445516867349,0.210441855886474,6.63614259109789,5.0578462975364,1.80062129805349,2.10986744970001,3.06164246180975,1.66547836370305,1.21812241927647,0,7.32931175971664,3.59301552318857,1.75951124163949,1.31517439456545,1.94633074457919,1.39300866608867,1.4404749548556,4.57778813682534,5.61770549850588,3.86021860672073,3.6941254921427,2.48550927042602,2.34526059981096,0.900310307305074,1.18372367792605,0.590292695242212,0.154267112887378,1.16266972375204,1.07309360559848,1.05088808130453,0.493679549740441,0.32833492815819,0.243206428637567,0,0.658650345873152,0.268412837520744,0,0.617427674275707,0,0.264450566663544,3.83918850963421,1.62565670302307,3.35055399437443,1.61346819698674,2.00140239460383,0.951128130562796,0,1.31759163779209,0.502670417600539,1.59165177632921,0.779856348476481,0.898819408654221,0,0.199141273254367,3.98302592001472,4.11294645395024,5.63538678365402,3.86937522906097,3.68509725618489,2.73529697572242,1.51767689098217,0.295220295959204,0.941992367048249,0.493588655687202,0,6.50695912292767,5.89676985339609,4.04751802292737,3.24576194221605,1.92941727801933,2.5462585178142,3.45235364940973,2.7562988551756,3.29473695825698,4.31304619582064,2.97712758134803,6.86482880852033,2.52578877947112,1.61457672169721,3.37710464954357,0.184753190166605,4.54779388249163,3.58522948172457,3.90413697282933,3.75504397261603,1.17254380209271,0.476087281772027,1.95133647857799,1.10344600874334,1.10732344824387,1.91345722388985,0.491589944147214,0.172684981865896,0.578596234326046,0,0,0.491764273019036,0.275936746304732,0.160550589987792,0.117211686592203,0.163934945376675,0.757412781613119,2.52406575533005,1.17131623288992,1.93881057959519,1.19484398976276,1.33679204449436,2.54768877709949,1.61924280669958,0.876767573733936,0.395287777946524,0,1.70328102249922,1.95872164033981,1.30309567482861,1.15479086080775,0,5.09839335925461,3.62788268357701,1.13163047853539,1.77181135728464,1.22974059177571,2.06742634534577,2.54473610634254,0.712994756769443,0.632073515871632,1.05418608574999,0,0.340439605753788,4.86164953884538,3.62204314591713,1.71469628025274,1.41872186913819,1.60531935841864,0.658196082408484,0.304464949114599,2.3467170806371,0.42366414172764,0,0.32977250588296,0.645857706783622,1.02531972377865,0.954978752025092,1.31312719796049,0.874442509889552,0.18542530201051,0.683483523191411,4.74689796315412,4.25947412950337,0.941842285023455,0.956859594047176,1.14389086603261,10.3686842296252,11.3360676382163,8.98299829728755,0,4.4287039101359,3.45643094115643,1.40406943068342,1.25452977608681,0.655087691238533,1.21377911746339,0.826534557253359,0.785267825952089,0.129614973291793,0,0,3.88743019714345,4.46737924234164,3.30567020184881,2.45403664607689,2.36538575687089,3.0512882047896,3.3853140059427,4.50895181030557,1.69108884578204,0.576060012515731,1.58005560314089,35.8823631063591,26.1912940770309,12.4723990058683,11.9947886097213,5.96044064343795,5.4087952283986,5.75989155980851,3.12995994839258,4.49620159264499,2.11734988787365,2.24153125701431,2.02044867444692,1.05189211963412,0.226730383615211,121.870288402362,62.4408442001951,50.0296156764954,0,0.375364950902364,0.36630324853453,0.428736758158132,1.00314420807073,0,0,0,0.171853182343688,0,0,0,0,0,0,4.98179268404048,3.19219898720825,1.70733605754134,3.16038732188782,1.67690530102386,0.367687016900028,0.888986911206461,2.06035057238894,0.962757628775446,1.26348605881899,1.52087579934144,2.07488975524684,1.49826411951812,0.960377286073039,1.09127391015665,3.81034953026459,1.97003354106254,1.92909220463705,0.824171801606613,0.441596760403192,1.02860775715625,1.59728225543404,1.66905332963125,2.0348498328526,0.941093804153306,1.4384483341585,2.37806364734604,1.05227884575137,1.08643291076689,2.80571135828869,1.06771516311757,1.0835493061312,2.45538625901814,1.23949472948773,0.385813221962283,1.99848462350357,1.16965804222704,2.14871054048298,1.3390183244819,0.441182838239031,0.927471342481686
|phase1_expression=1.92178616525753,0,0,0,0,1.34303417529512,1.63528848416868,0.516493293766305,10.6999428835267,8.66038747391376,3.4243593645101,4.06838010876216,0.171200729931206,0.262261207256992,2.33176833270964,0.809901069559304,0,0.473193248037357,0.411343300817216,2.54633791078818,0.425216450755349,22.7376278250027,23.7691808116431,1.27993938234725,0.22940928106717,0.57423196411502,0.86152399231815,0.646413698057667,0,0,0.665191531965914,1.27006134691926,2.46025915033828,0,1.73310971850765,1.49611180822643,2.45003227514843,0.418531630736908,0,0,0,0,0,0.377690453926732,0.709638518536602,0,0,0.218025156380447,0.659058548203415,0.194429899074283,0.139986421625363,0,0.671130424230945,1.45072428402269,2.35265659399725,0,0,0,0.404632921719196,1.05798195854407,1.26766280701236,0,0.889294796111139,0,0,0,0,0.384218305321555,1.24427534770173,1.62007125998029,0.841299845405528,0.285650984403804,0.220868540951614,0.61245399607477,0.862609239164127,1.83843757322004,0,0,0,1.45074916503213,1.00636407962651,0.52091337055676,0.279182999001381,0,0,1.17851434189467,0.711858403995515,0.372798891650601,0.454357159999104,0.226714680320357,2.02905142091174,1.72084775396277,1.3599426674155,1.61910957491345,0,0,0.280888840263504,0.170430322578058,0.779358013808606,0.35333957451034,0.704217098883403,0,0,0,0.216491041011214,0.760079596425296,1.51657333504435,0.11418387971906,0,0.148442139064825,3.99016251562112,2.43572382649713,0.691846491768175,0.452167921657868,1.41106448562846,0.376999773989026,0.247194967734374,0.433798070759735,1.76922110389975,1.94120219936891,0.883366073841574,2.42437626567611,0,0,0,0.255457055208591,7.54835284387298,8.99854096490112,6.98886248901856,0.149790639404823,0.457500602818626,0.376963056338593,0.173824320192276,0,0.20778804455956,0.162241263067758,1.62942982160506,0.622034853050465,0.505445516867349,0.210441855886474,6.63614259109789,5.0578462975364,1.80062129805349,2.10986744970001,3.06164246180975,1.66547836370305,1.21812241927647,0,7.32931175971664,3.59301552318857,1.75951124163949,1.31517439456545,1.94633074457919,1.39300866608867,1.4404749548556,4.57778813682534,5.61770549850588,3.86021860672073,3.6941254921427,2.48550927042602,2.34526059981096,0.900310307305074,1.18372367792605,0.590292695242212,0.154267112887378,1.16266972375204,1.07309360559848,1.05088808130453,0.493679549740441,0.32833492815819,0.243206428637567,0,0.658650345873152,0.268412837520744,0,0.617427674275707,0,0.264450566663544,3.83918850963421,1.62565670302307,3.35055399437443,1.61346819698674,2.00140239460383,0.951128130562796,0,1.31759163779209,0.502670417600539,1.59165177632921,0.779856348476481,0.898819408654221,0,0.199141273254367,3.98302592001472,4.11294645395024,5.63538678365402,3.86937522906097,3.68509725618489,2.73529697572242,1.51767689098217,0.295220295959204,0.941992367048249,0.493588655687202,0,6.50695912292767,5.89676985339609,4.04751802292737,3.24576194221605,1.92941727801933,2.5462585178142,3.45235364940973,2.7562988551756,3.29473695825698,4.31304619582064,2.97712758134803,6.86482880852033,2.52578877947112,1.61457672169721,3.37710464954357,0.184753190166605,4.54779388249163,3.58522948172457,3.90413697282933,3.75504397261603,1.17254380209271,0.476087281772027,1.95133647857799,1.10344600874334,1.10732344824387,1.91345722388985,0.491589944147214,0.172684981865896,0.578596234326046,0,0,0.491764273019036,0.275936746304732,0.160550589987792,0.117211686592203,0.163934945376675,0.757412781613119,2.52406575533005,1.17131623288992,1.93881057959519,1.19484398976276,1.33679204449436,2.54768877709949,1.61924280669958,0.876767573733936,0.395287777946524,0,1.70328102249922,1.95872164033981,1.30309567482861,1.15479086080775,0,5.09839335925461,3.62788268357701,1.13163047853539,1.77181135728464,1.22974059177571,2.06742634534577,2.54473610634254,0.712994756769443,0.632073515871632,1.05418608574999,0,0.340439605753788,4.86164953884538,3.62204314591713,1.71469628025274,1.41872186913819,1.60531935841864,0.658196082408484,0.304464949114599,2.3467170806371,0.42366414172764,0,0.32977250588296,0.645857706783622,1.02531972377865,0.954978752025092,1.31312719796049,0.874442509889552,0.18542530201051,0.683483523191411,4.74689796315412,4.25947412950337,0.941842285023455,0.956859594047176,1.14389086603261,10.3686842296252,11.3360676382163,8.98299829728755,0,4.4287039101359,3.45643094115643,1.40406943068342,1.25452977608681,0.655087691238533,1.21377911746339,0.826534557253359,0.785267825952089,0.129614973291793,0,0,3.88743019714345,4.46737924234164,3.30567020184881,2.45403664607689,2.36538575687089,3.0512882047896,3.3853140059427,4.50895181030557,1.69108884578204,0.576060012515731,1.58005560314089,35.8823631063591,26.1912940770309,12.4723990058683,11.9947886097213,5.96044064343795,5.4087952283986,5.75989155980851,3.12995994839258,4.49620159264499,2.11734988787365,2.24153125701431,2.02044867444692,1.05189211963412,0.226730383615211,121.870288402362,62.4408442001951,50.0296156764954,0,0.375364950902364,0.36630324853453,0.428736758158132,1.00314420807073,0,0,0,0.171853182343688,0,0,0,0,0,0,4.98179268404048,3.19219898720825,1.70733605754134,3.16038732188782,1.67690530102386,0.367687016900028,0.888986911206461,2.06035057238894,0.962757628775446,1.26348605881899,1.52087579934144,2.07488975524684,1.49826411951812,0.960377286073039,1.09127391015665,3.81034953026459,1.97003354106254,1.92909220463705,0.824171801606613,0.441596760403192,1.02860775715625,1.59728225543404,1.66905332963125,2.0348498328526,0.941093804153306,1.4384483341585,2.37806364734604,1.05227884575137,1.08643291076689,2.80571135828869,1.06771516311757,1.0835493061312,2.45538625901814,1.23949472948773,0.385813221962283,1.99848462350357,1.16965804222704,2.14871054048298,1.3390183244819,0.441182838239031,0.927471342481686
|short_description=p1@Dnmt3b
|short_description=p1@Dnmt3b
}}
}}

Latest revision as of 22:47, 25 September 2015

Short description:p1@Dnmt3b
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Dnmt3b_5end
Coexpression cluster:MCL_coexpression_mm9:97
Association with transcript: 0bp_to_ENSMUST00000056495, ENSMUST00000072997, ENSMUST00000081628, ENSMUST00000088976, ENSMUST00000103150, ENSMUST00000103151, ENSMUST00000109772, ENSMUST00000109773, ENSMUST00000109774, NM_001003960, NM_001003961, NM_001003963, NM_001122997, NM_010068, uc008nib.2, uc008nic.2, uc008nid.2, uc008nie.2, uc008nif.2, uc008nig.2, uc008nih.2, uc008nii.2, uc008nij.2_5end
EntrezGene:Dnmt3b
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Dnmt3b

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.92
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.64
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.52
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E710.70
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F28.66
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E63.42
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F14.07
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.26
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.81
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.47
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.41
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.55
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.43
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H222.74
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I923.77
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.28
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I20.65
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.67
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.27
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G62.46
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.73
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.50
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F72.45
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.71
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.67
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I91.45
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.35
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.40
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.24
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.62
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.84
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.61
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.86
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.45
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.01
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.18
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.37
Mouse Schwann, donor1.CNhs12507.11728-123D90.45
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.03
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C41.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.62
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.78
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.70
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.76
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.52
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C53.99
adrenal gland, embryo E16.CNhs11004.1254-43D62.44
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C11.41
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F51.94
bone (os femoris), neonate N16.CNhs11225.1525-43A60.88
bone (os femoris), neonate N20.CNhs11195.1350-25C32.42
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C77.55
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D19.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D46.99
corpora quadrigemina, adult.CNhs10501.16-22A40.15
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.38
cortex, adult.CNhs10473.12-14D50.17
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.21
diencephalon, neonate N30.CNhs11201.1388-42B20.16
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.63
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.62
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C66.64
eyeball, embryo E14.CNhs10521.399-16E25.06
eyeball, embryo E15.CNhs10593.426-16C91.80
eyeball, embryo E17.CNhs11023.1261-18D42.11
eyeball, neonate N00.CNhs11207.633-15C63.06
eyeball, neonate N01.CNhs11140.1532-43E71.67
eyeball, neonate N02.CNhs11205.1551-44G81.22
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E27.33
forelimb, embryo E12.CNhs10600.359-14H23.59
forelimb, embryo E13.CNhs10589.384-1E21.76
forelimb, embryo E14.CNhs10577.413-26A81.32
forelimb, embryo E15.CNhs11007.437-20E71.95
forelimb, embryo E17.CNhs10598.1517-43C41.39
forelimb, embryo E18.CNhs11008.1520-43B51.44
gonad, embryo E13.CNhs11044.1564-45I64.58
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C85.62
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D23.86
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D53.69
heart, embryo E11.CNhs10586.331-24E92.49
heart, embryo E12.CNhs11015.353-12F52.35
heart, embryo E13.CNhs11013.376-3I90.90
heart, embryo E14.CNhs10597.403-26D41.18
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E51.16
heart, embryo E18.CNhs11030.1283-20G31.07
heart, neonate N00.CNhs11213.639-21E31.05
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.24
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.66
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.62
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I53.84
intestine, embryo E13.CNhs11010.381-16D51.63
intestine, embryo E15.CNhs10602.976-16D83.35
intestine, embryo E16.CNhs10585.463-22H41.61
intestine, embryo E17.CNhs10582.482-18D32.00
intestine, embryo E18.CNhs10526.1289-20F70.95
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E91.32
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F21.59
intestine, neonate N10.CNhs11098.755-23A50.78
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I93.98
kidney, embryo E15.CNhs10997.434-16F84.11
kidney, embryo E16.CNhs10584.464-22A55.64
kidney, embryo E17.CNhs11028.483-18I23.87
kidney, embryo E18.CNhs11001.1288-20C73.69
kidney, neonate N00.CNhs11214.646-21G72.74
kidney, neonate N10.CNhs11206.758-6D51.52
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.94
kidney, neonate N30.CNhs11203.1385-42H10.49
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F86.51
liver, embryo E13.CNhs10524.378-3H65.90
liver, embryo E14.CNhs10594.409-16E14.05
liver, embryo E15.CNhs10520.433-16D73.25
liver, embryo E16.CNhs10523.462-17F51.93
liver, embryo E17.CNhs10510.481-18A32.55
liver, embryo E18.CNhs10579.499-43G43.45
liver, neonate N00.CNhs11117.641-24F42.76
liver, neonate N03.CNhs11123.1345-25G23.29
liver, neonate N06.CNhs11101.684-20A84.31
liver, neonate N07.CNhs11103.716-20H22.98
liver, neonate N10.CNhs11115.751-24B96.86
liver, neonate N20.CNhs11220.823-25A32.53
liver, neonate N25.CNhs11198.1368-26H11.61
liver, neonate N30.CNhs11106.1382-42D13.38
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G24.55
lung, embryo E14.CNhs10604.404-26F83.59
lung, embryo E15.CNhs11020.432-17C53.90
lung, embryo E16.CNhs10998.458-17B63.76
lung, embryo E17.CNhs10605.480-44A61.17
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C61.95
lung, neonate N06.CNhs11212.683-20E51.10
lung, neonate N07.CNhs11111.715-19A31.11
lung, neonate N10.CNhs11219.750-23E61.91
lung, neonate N20.CNhs11109.822-18A40.49
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.58
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.12
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.52
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.94
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.19
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.34
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.55
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.62
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I71.70
ovary, embryo E18.CNhs11040.505-44H71.96
ovary, neonate N00.CNhs11217.1299-22I41.30
oviduct, adult pregnant day01.CNhs10500.988-6G61.15
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F45.10
pancreas, embryo E15.CNhs11042.1556-45F23.63
pancreas, embryo E16.CNhs11003.460-26E51.13
pancreas, embryo E17.CNhs10599.1558-45G31.77
pancreas, embryo E18.CNhs10580.1535-43I71.23
pancreas, neonate N00.CNhs11105.645-26G92.07
pancreas, neonate N01.CNhs11138.1531-43D72.54
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E64.86
pituitary gland, embryo E13.CNhs11009.370-44C73.62
pituitary gland, embryo E14.CNhs11037.398-44A51.71
pituitary gland, embryo E15.CNhs10592.427-16B91.42
pituitary gland, embryo E16.CNhs11036.449-43F61.61
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I72.35
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.65
skin, neonate N03.CNhs11215.662-22H31.03
skin, neonate N06.CNhs11097.693-20I50.95
skin, neonate N10.CNhs11108.762-6C41.31
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G20.68
spleen, embryo E16.CNhs11035.461-43C14.75
spleen, embryo E18.CNhs11011.1271-21F24.26
spleen, neonate N10.CNhs11116.752-24D10.94
spleen, neonate N20.CNhs11112.824-19H10.96
spleen, neonate N25.CNhs11099.1354-25G31.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C610.37
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C911.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D38.98
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E34.43
stomach, embryo E15.CNhs10603.1252-16G83.46
stomach, embryo E16.CNhs11022.459-17D41.40
stomach, embryo E17.CNhs11006.1035-18D51.25
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B81.21
stomach, neonate N07.CNhs11210.718-18A90.83
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F53.89
testis, embryo E15.CNhs11034.443-27C54.47
testis, embryo E16.CNhs11033.470-26G53.31
testis, embryo E17.CNhs11029.486-18I52.45
testis, embryo E18.CNhs11027.503-18G52.37
testis, neonate N00.CNhs11189.1300-22B73.05
testis, neonate N07.CNhs11222.726-26I43.39
testis, neonate N10.CNhs11204.763-44D94.51
testis, neonate N20.CNhs11110.839-18H31.69
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B51.58
thymus, embryo E14.CNhs11041.402-44I435.88
thymus, embryo E15.CNhs11005.430-45I226.19
thymus, embryo E16.CNhs11002.456-26C512.47
thymus, embryo E17.CNhs10581.478-18C111.99
thymus, embryo E18.CNhs10595.1273-19G45.96
thymus, neonate N02.CNhs11181.1541-43F85.41
thymus, neonate N03.CNhs11137.2104-43C75.76
thymus, neonate N06.CNhs11197.681-26C43.13
thymus, neonate N07.CNhs11211.713-19D34.50
thymus, neonate N10.CNhs11194.748-24E42.12
thymus, neonate N20.CNhs11186.820-7A22.24
thymus, neonate N25.CNhs11125.1362-25G72.02
thymus, neonate N30.CNhs11132.1393-42G21.05
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H3121.87
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F762.44
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G550.03
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I84.98
whole body, embryo E12.CNhs10587.857-27C93.19
whole body, embryo E13.CNhs10512.372-23H21.71
whole body, embryo E14.5.CNhs10578.420-27D23.16
whole body, embryo E14.CNhs10519.395-14B11.68
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.50
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.81
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.97
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.81
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.07
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.08
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.46
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.24
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I52.00
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C22.15
whole body, neonate N01.CNhs10576.659-23C61.34
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
endocrine gland4.48e-0860
endocrine system7.50e-0872
gut epithelium9.46e-0855
endo-epithelium1.57e-0769
primordium4.55e-07134
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr2:153475178..153475196,%2B&oldid=4218576"