FFCP PHASE1:Mm9::chr10:29255663..29255686,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=72780|HGNC=|MCL_coexpression_id=1240|UniProt=Q2TJ95|association_with_transcript=0bp_to_ENSMUST00000092623,NM_028351,uc007etb.2_5end|description=CAGE_peak_2_at_Rspo3_5end|id=chr10:29255663..29255686,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000956!1.60e-08!21;UBERON:0001869!1.60e-08!21;UBERON:0000203!1.60e-08!21;UBERON:0002021!3.35e-07!10;UBERON:0000411!3.35e-07!10;UBERON:0001950!3.35e-07!10;UBERON:0003080!8.29e-07!40|ontology_enrichment_uberon_v019_2=UBERON:0002021,2.74e-08,10;UBERON:0000411,2.74e-08,10;UBERON:0001950,2.74e-08,10;UBERON:0000956,1.06e-07,21;UBERON:0001869,1.06e-07,21;UBERON:0000203,1.06e-07,21|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44573593256819,0.198581902401771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00717454380462,1.31790010585369,0.183546752161682,0,0,0.439372365468944,0.388859798148567,0.839918529752175,0,0,0,0,0,0,0.515672092277442,0.404632921719196,0,0.633831403506179,0.338844532069132,0,0,0,0,0.299600110518405,0,5.91030790158323,3.10513658162888,6.30974884054146,0.571301968807607,0.883474163806454,0.857435594504678,0.575072826109418,0.919218786610021,1.10115880999389,1.40456071893706,1.22885226604995,0.395658863190582,0.640413505216868,0,0,1.68828783009504,1.5279824777681,0.883885756421003,0.711858403995515,0.186399445825301,0.227178579999552,0.226714680320357,44.9289957487601,4.30211938490693,0,0,0,0,0.842666520790511,5.28333999991979,2.33807404142582,3.5333957451034,0.281686839553361,21.815501160434,33.1246811618639,42.6640021891999,0,0,0,0.45673551887624,0.258937883647172,4.00793775475027,2.08182392119363,1.82679286987285,2.07553947530453,1.80867168663147,1.52865319276416,2.13633205260448,0,0.289198713839823,0.884610551949874,1.7794353494215,1.10420759230197,1.93950101254089,1.86391761218122,0.585561594023094,1.25668024088073,0.510914110417183,0,0,0,2.24685959107234,1.37250180845588,0.376963056338593,5.73620256634512,4.85859368927628,1.24672826735736,3.56930778749067,7.73979165262404,1.24406970610093,1.26361379216837,0,0.520481771850815,0,0,0.30140963567143,0.408218994907967,0.512454881139399,0.374806898238915,0,4.095791865724,2.45837904218165,3.69497360744293,3.72632745126877,1.94633074457919,3.1342694986995,2.26360350048738,1.39323986772945,0,0,0,2.07125772535502,1.87620847984877,2.16074473753218,2.3674473558521,1.57411385397923,0.154267112887378,1.16266972375204,0.268273401399619,0.350296027101508,0.987359099480883,0,0,0.146199987425332,0,0,6.72927835405207,3.60166143327496,0,0.264450566663544,3.19932375802851,3.94802342162745,3.47942145569652,2.01683524623343,0.444756087689741,1.33157938278791,1.42358718463353,0.494096864172033,0.754005626400808,1.79060824837036,1.55971269695296,0,0.432276099749388,0.995706366271836,1.13800740571849,1.48523066392647,1.1270773567308,1.01825663922657,1.55161989734101,1.61312385747733,0.632365371242573,0.590440591918409,0,0.123397163921801,0.592905254174298,1.16791574001266,1.37591296579242,0.674586337154561,0.202860121388503,0.482354319504834,1.52775511068852,0.575392274901621,1.29708181420028,1.64736847912849,5.75072826109418,2.23284568601102,1.5601883655728,1.51547326768267,0.538192240565737,1.4473305640901,0.184753190166605,1.51593129416388,0.488894929326078,0.169745085775188,0.234690248288502,0.167506257441816,0,0,0,0.221464689648775,0.318909537314974,0.491589944147214,0.345369963731791,0.144649058581512,0,0,0,0,1.76605648986571,1.64096361229084,0,0.504941854408746,0,0.390438744296638,0,0,0,0,0,0.584511715822624,0,9.63963949265421,1.70328102249922,3.73937767701236,3.4206261464251,9.89820737835213,0,0.971122544619926,0.906970670894253,1.13163047853539,1.18120757152309,0,0.258428293168221,0.363533729477506,1.42598951353889,0.948110273807448,1.05418608574999,0,0.340439605753788,1.08036656418786,0.388076051348264,0.857348140126369,1.77340233642274,1.24858172321449,1.64549020602121,0.608929898229199,2.3467170806371,0.21183207086382,3.30792597082443,1.97863503529776,3.87514624070173,2.35220407219808,0.596861720015682,0.492422699235184,1.7488850197791,2.78137953015765,0.170870880797853,3.30218988741156,3.33350149265481,0.188368457004691,0.27338845544205,0.457556346413045,0,0,0,0.954670618015114,3.00519193902079,3.25311147402958,2.16010681643603,2.09088296014469,1.52853794622324,1.61837215661785,3.05817786183743,2.6175594198403,1.03691978633434,0,0,0.598066184175915,0.165458490457098,0.972255941720238,0.516639293910924,0.506868376472335,1.64300134104056,0.911430693907651,0,0,0,0,1.41907650703115,0.821687657318618,0.25984164595559,0.179026695667481,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0,0,2.51146472241848,3.56596703357246,5.86085197655248,2.35805216986972,2.00628841614145,3.3885110557024,5.06357760157895,2.29158205375759,7.04598047609119,5.48066015816514,6.0431511791176,5.40018000185445,5.40385443869065,7.25027854374727,5.1776031175182,1.764384908931,3.19219898720825,2.90247129782028,3.16038732188782,1.46729213839588,2.20612210140017,2.00022055021454,2.06035057238894,1.28367683836726,1.76888048234658,0.50695859978048,1.13175804831646,1.12369808963859,2.04880487695582,2.12511235135769,0.476293691283074,1.39061191133827,2.12200142510076,0.824171801606613,0.883193520806384,1.02860775715625,2.8396128985494,2.14592570952589,1.59881058295561,1.50575008664529,1.69229215783353,1.28049581010941,1.8414879800649,1.7654534799962,3.92799590160417,2.49133538060766,1.37906275325789,0.818462086339379,1.23949472948773,2.50778594275484,1.49886346762768,0.233931608445408,1.50409737833809,2.86932498103265,1.32354851471709,2.31867835620421|short_description=p2@Rspo3}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=72780 | |||
|HGNC= | |||
|MCL_coexpression_id=1240 | |||
|TSSclassifier=NA | |||
|UniProt=Q2TJ95 | |||
|association_with_transcript=0bp_to_ENSMUST00000092623,NM_028351,uc007etb.2_5end | |||
|cluster_id=chr10:29255663..29255686,- | |||
|description=CAGE_peak_2_at_Rspo3_5end | |||
|id=chr10:29255663..29255686,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000956!1.60e-08!21;UBERON:0001869!1.60e-08!21;UBERON:0000203!1.60e-08!21;UBERON:0002021!3.35e-07!10;UBERON:0000411!3.35e-07!10;UBERON:0001950!3.35e-07!10;UBERON:0003080!8.29e-07!40 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,2.74e-08,10;UBERON:0000411,2.74e-08,10;UBERON:0001950,2.74e-08,10;UBERON:0000956,1.06e-07,21;UBERON:0001869,1.06e-07,21;UBERON:0000203,1.06e-07,21 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44573593256819,0.198581902401771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00717454380462,1.31790010585369,0.183546752161682,0,0,0.439372365468944,0.388859798148567,0.839918529752175,0,0,0,0,0,0,0.515672092277442,0.404632921719196,0,0.633831403506179,0.338844532069132,0,0,0,0,0.299600110518405,0,5.91030790158323,3.10513658162888,6.30974884054146,0.571301968807607,0.883474163806454,0.857435594504678,0.575072826109418,0.919218786610021,1.10115880999389,1.40456071893706,1.22885226604995,0.395658863190582,0.640413505216868,0,0,1.68828783009504,1.5279824777681,0.883885756421003,0.711858403995515,0.186399445825301,0.227178579999552,0.226714680320357,44.9289957487601,4.30211938490693,0,0,0,0,0.842666520790511,5.28333999991979,2.33807404142582,3.5333957451034,0.281686839553361,21.815501160434,33.1246811618639,42.6640021891999,0,0,0,0.45673551887624,0.258937883647172,4.00793775475027,2.08182392119363,1.82679286987285,2.07553947530453,1.80867168663147,1.52865319276416,2.13633205260448,0,0.289198713839823,0.884610551949874,1.7794353494215,1.10420759230197,1.93950101254089,1.86391761218122,0.585561594023094,1.25668024088073,0.510914110417183,0,0,0,2.24685959107234,1.37250180845588,0.376963056338593,5.73620256634512,4.85859368927628,1.24672826735736,3.56930778749067,7.73979165262404,1.24406970610093,1.26361379216837,0,0.520481771850815,0,0,0.30140963567143,0.408218994907967,0.512454881139399,0.374806898238915,0,4.095791865724,2.45837904218165,3.69497360744293,3.72632745126877,1.94633074457919,3.1342694986995,2.26360350048738,1.39323986772945,0,0,0,2.07125772535502,1.87620847984877,2.16074473753218,2.3674473558521,1.57411385397923,0.154267112887378,1.16266972375204,0.268273401399619,0.350296027101508,0.987359099480883,0,0,0.146199987425332,0,0,6.72927835405207,3.60166143327496,0,0.264450566663544,3.19932375802851,3.94802342162745,3.47942145569652,2.01683524623343,0.444756087689741,1.33157938278791,1.42358718463353,0.494096864172033,0.754005626400808,1.79060824837036,1.55971269695296,0,0.432276099749388,0.995706366271836,1.13800740571849,1.48523066392647,1.1270773567308,1.01825663922657,1.55161989734101,1.61312385747733,0.632365371242573,0.590440591918409,0,0.123397163921801,0.592905254174298,1.16791574001266,1.37591296579242,0.674586337154561,0.202860121388503,0.482354319504834,1.52775511068852,0.575392274901621,1.29708181420028,1.64736847912849,5.75072826109418,2.23284568601102,1.5601883655728,1.51547326768267,0.538192240565737,1.4473305640901,0.184753190166605,1.51593129416388,0.488894929326078,0.169745085775188,0.234690248288502,0.167506257441816,0,0,0,0.221464689648775,0.318909537314974,0.491589944147214,0.345369963731791,0.144649058581512,0,0,0,0,1.76605648986571,1.64096361229084,0,0.504941854408746,0,0.390438744296638,0,0,0,0,0,0.584511715822624,0,9.63963949265421,1.70328102249922,3.73937767701236,3.4206261464251,9.89820737835213,0,0.971122544619926,0.906970670894253,1.13163047853539,1.18120757152309,0,0.258428293168221,0.363533729477506,1.42598951353889,0.948110273807448,1.05418608574999,0,0.340439605753788,1.08036656418786,0.388076051348264,0.857348140126369,1.77340233642274,1.24858172321449,1.64549020602121,0.608929898229199,2.3467170806371,0.21183207086382,3.30792597082443,1.97863503529776,3.87514624070173,2.35220407219808,0.596861720015682,0.492422699235184,1.7488850197791,2.78137953015765,0.170870880797853,3.30218988741156,3.33350149265481,0.188368457004691,0.27338845544205,0.457556346413045,0,0,0,0.954670618015114,3.00519193902079,3.25311147402958,2.16010681643603,2.09088296014469,1.52853794622324,1.61837215661785,3.05817786183743,2.6175594198403,1.03691978633434,0,0,0.598066184175915,0.165458490457098,0.972255941720238,0.516639293910924,0.506868376472335,1.64300134104056,0.911430693907651,0,0,0,0,1.41907650703115,0.821687657318618,0.25984164595559,0.179026695667481,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0,0,2.51146472241848,3.56596703357246,5.86085197655248,2.35805216986972,2.00628841614145,3.3885110557024,5.06357760157895,2.29158205375759,7.04598047609119,5.48066015816514,6.0431511791176,5.40018000185445,5.40385443869065,7.25027854374727,5.1776031175182,1.764384908931,3.19219898720825,2.90247129782028,3.16038732188782,1.46729213839588,2.20612210140017,2.00022055021454,2.06035057238894,1.28367683836726,1.76888048234658,0.50695859978048,1.13175804831646,1.12369808963859,2.04880487695582,2.12511235135769,0.476293691283074,1.39061191133827,2.12200142510076,0.824171801606613,0.883193520806384,1.02860775715625,2.8396128985494,2.14592570952589,1.59881058295561,1.50575008664529,1.69229215783353,1.28049581010941,1.8414879800649,1.7654534799962,3.92799590160417,2.49133538060766,1.37906275325789,0.818462086339379,1.23949472948773,2.50778594275484,1.49886346762768,0.233931608445408,1.50409737833809,2.86932498103265,1.32354851471709,2.31867835620421 | |||
|short_description=p2@Rspo3 | |||
}} |
Latest revision as of 22:46, 25 September 2015
Short description: | p2@Rspo3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Rspo3_5end |
Coexpression cluster: | MCL_coexpression_mm9:1240 |
Association with transcript: | 0bp_to_ENSMUST00000092623, NM_028351, uc007etb.2_5end |
EntrezGene: | Rspo3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 2.74e-08 | 10 |
visual cortex | 2.74e-08 | 10 |
neocortex | 2.74e-08 | 10 |
cerebral cortex | 1.06e-07 | 21 |
cerebral hemisphere | 1.06e-07 | 21 |
pallium | 1.06e-07 | 21 |