FFCP PHASE1:Mm9::chr8:88364681..88364693,-: Difference between revisions
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{{FFCP|EntrezGene=71927|HGNC=|UniProt=Q99KW9|association_with_transcript=154bp_to_ENSMUST00000034140,NM_028007,uc009mqf.2_5end|description=CAGE_peak_3_at_Itfg1_5end|id=chr8:88364681..88364693,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!3.27e-14!102;UBERON:0000924!3.27e-14!102;UBERON:0006601!3.27e-14!102;UBERON:0000033!2.33e-12!63;UBERON:0000073!3.99e-12!75;UBERON:0001016!3.99e-12!75;UBERON:0001017!2.10e-11!73;UBERON:0005743!2.10e-11!73;UBERON:0002346!3.49e-11!71;UBERON:0003075!3.49e-11!71;UBERON:0007284!3.49e-11!71;UBERON:0001049!5.98e-11!52;UBERON:0005068!5.98e-11!52;UBERON:0006241!5.98e-11!52;UBERON:0007135!5.98e-11!52;UBERON:0002020!1.06e-10!34;UBERON:0000955!1.86e-10!50;UBERON:0006238!1.86e-10!50;UBERON:0002616!6.99e-10!49;UBERON:0003056!1.89e-09!49;UBERON:0002791!1.44e-08!29;UBERON:0003528!1.44e-08!29;UBERON:0001893!1.44e-08!29;UBERON:0003080!1.04e-07!40;UBERON:0007023!2.07e-07!51;UBERON:0002780!3.21e-07!39;UBERON:0001890!3.21e-07!39;UBERON:0006240!3.21e-07!39|ontology_enrichment_uberon_v019_2=UBERON:0004121,2.19e-16,95;UBERON:0000924,2.19e-16,95;UBERON:0006601,2.19e-16,95;UBERON:0010371,6.31e-14,73;UBERON:0002346,5.78e-13,64;UBERON:0003075,5.78e-13,64;UBERON:0007284,5.78e-13,64;UBERON:0001016,8.83e-13,75;UBERON:0000073,1.71e-12,54;UBERON:0001017,5.31e-12,73;UBERON:0002020,1.75e-11,34;UBERON:0001049,2.12e-11,52;UBERON:0005068,2.12e-11,52;UBERON:0006241,2.12e-11,52;UBERON:0007135,2.12e-11,52;UBERON:0003056,1.69e-09,49;UBERON:0000955,2.76e-09,47;UBERON:0006238,2.76e-09,47;UBERON:0003528,3.70e-09,29;UBERON:0002791,3.70e-09,29;UBERON:0001893,3.70e-09,29;UBERON:0002616,1.06e-08,46;UBERON:0003080,7.43e-08,40;UBERON:0007023,1.15e-07,51;UBERON:0002780,2.46e-07,39;UBERON:0001890,2.46e-07,39;UBERON:0006240,2.46e-07,39;UBERON:0010314,4.67e-07,92|phase1_expression=1.12104192973356,2.09385244583617,6.3699893514535,2.41971369045464,3.00537437967808,2.18243053485457,0.700837921786577,0.129123323441576,0.140788722151667,0.234064526321993,0.34243593645101,0.239316476986009,0.171200729931206,0,0.333109761815663,0.607425802169478,0,0.315462165358238,0.274228867211478,0,1.44573593256819,0.496454756004426,0.261199789138935,3.19984845586813,2.98232065387321,4.01962374880514,4.30761996159075,2.58565479223067,4.75058548640935,4.78857246543868,3.10422714917427,0,0,0,1.1554064790051,1.49611180822643,1.22501613757421,0,0,0.523523743973798,0.588231488031014,1.36609096991689,0.971020706062307,2.89562681343828,1.31790010585369,3.12029478674859,0.782391344348039,0.218025156380447,1.31811709640683,1.1665793944457,0.699932108126813,0,0,0.725362142011344,0,1.02903774414379,0.573066879877513,1.03134418455488,2.02316460859598,0.528990979272033,1.90149421051854,0.338844532069132,0,0,0,0.7104801149461,0.299600110518405,1.15265491596466,1.45165457231869,1.21505344498522,0.841299845405528,1.99955689082663,2.87129103237098,1.46988959057945,0.287536413054709,1.83843757322004,3.30347642998166,5.10749352340751,3.84016333140609,1.05509030184155,1.37231465403614,3.64639359389732,3.07101298901519,5.6276261003168,2.75036845998258,3.83017161115768,4.9830088279686,2.23679334990361,1.8931548333296,3.55186332501892,1.15945795480671,3.44169550792555,0.679971333707751,1.07940638327563,1.29955283489534,1.34408066129201,1.40444420131752,0.852151612890289,2.07828803682295,2.12003744706204,1.12674735821344,0,5.09610479413291,0,2.38140145112336,0.253359865475099,1.01104889002957,2.05530983494308,0.258937883647172,1.63286352971307,0.520455980298408,0.913396434936424,0,1.3565037649736,0.587943535678524,1.38233250462643,1.23597483867187,3.61498392299779,0.884610551949874,0.323533699894818,1.10420759230197,0.484875253135222,1.86391761218122,3.22058876712702,2.51336048176146,2.29911349687732,0.838705871541442,1.19980546198682,0.635351135365324,4.49371918214468,4.11750542536764,4.39790232395025,3.12883776346098,2.55715457330331,2.49345653471472,4.2182728397617,0.81471491080253,0.746441823660558,0.505445516867349,2.73574412652416,1.17108398666433,1.37941262660084,0.900310649026746,1.65775299619287,2.65342346690179,1.7935920839879,3.46696380870997,3.62184719034622,1.29340795759705,1.32374256117473,1.40760899331159,0.657587197282725,1.11218899690239,2.43776516565517,0.411564272815887,0.59710280045548,0,1.02939162845886,0.284163499395593,0.828503090142008,0.938104239924385,0.900310307305074,0.710234206755631,0.590292695242212,1.07986979021165,0.232533944750408,0.804820204198858,1.5179494507732,0.822799249567402,1.31333971263276,1.37816976227955,0.584799949701329,1.09775057645525,0.536825675041487,5.25724871410318,2.46971069710283,1.98251269790279,1.32225283331772,0.426576501070468,1.16118335930219,1.67527699718721,0.80673409849337,0.889512175379481,1.33157938278791,4.2707615539006,1.31759163779209,1.50801125280162,1.1937388322469,1.55971269695296,0,2.37751854862164,1.39398891278057,1.32767530667157,0.799739588268102,1.1270773567308,0.610953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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=71927 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=Q99KW9 | |||
|association_with_transcript=154bp_to_ENSMUST00000034140,NM_028007,uc009mqf.2_5end | |||
|cluster_id=chr8:88364681..88364693,- | |||
|description=CAGE_peak_3_at_Itfg1_5end | |||
|id=chr8:88364681..88364693,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!3.27e-14!102;UBERON:0000924!3.27e-14!102;UBERON:0006601!3.27e-14!102;UBERON:0000033!2.33e-12!63;UBERON:0000073!3.99e-12!75;UBERON:0001016!3.99e-12!75;UBERON:0001017!2.10e-11!73;UBERON:0005743!2.10e-11!73;UBERON:0002346!3.49e-11!71;UBERON:0003075!3.49e-11!71;UBERON:0007284!3.49e-11!71;UBERON:0001049!5.98e-11!52;UBERON:0005068!5.98e-11!52;UBERON:0006241!5.98e-11!52;UBERON:0007135!5.98e-11!52;UBERON:0002020!1.06e-10!34;UBERON:0000955!1.86e-10!50;UBERON:0006238!1.86e-10!50;UBERON:0002616!6.99e-10!49;UBERON:0003056!1.89e-09!49;UBERON:0002791!1.44e-08!29;UBERON:0003528!1.44e-08!29;UBERON:0001893!1.44e-08!29;UBERON:0003080!1.04e-07!40;UBERON:0007023!2.07e-07!51;UBERON:0002780!3.21e-07!39;UBERON:0001890!3.21e-07!39;UBERON:0006240!3.21e-07!39 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,2.19e-16,95;UBERON:0000924,2.19e-16,95;UBERON:0006601,2.19e-16,95;UBERON:0010371,6.31e-14,73;UBERON:0002346,5.78e-13,64;UBERON:0003075,5.78e-13,64;UBERON:0007284,5.78e-13,64;UBERON:0001016,8.83e-13,75;UBERON:0000073,1.71e-12,54;UBERON:0001017,5.31e-12,73;UBERON:0002020,1.75e-11,34;UBERON:0001049,2.12e-11,52;UBERON:0005068,2.12e-11,52;UBERON:0006241,2.12e-11,52;UBERON:0007135,2.12e-11,52;UBERON:0003056,1.69e-09,49;UBERON:0000955,2.76e-09,47;UBERON:0006238,2.76e-09,47;UBERON:0003528,3.70e-09,29;UBERON:0002791,3.70e-09,29;UBERON:0001893,3.70e-09,29;UBERON:0002616,1.06e-08,46;UBERON:0003080,7.43e-08,40;UBERON:0007023,1.15e-07,51;UBERON:0002780,2.46e-07,39;UBERON:0001890,2.46e-07,39;UBERON:0006240,2.46e-07,39;UBERON:0010314,4.67e-07,92 | |||
|phase1_expression=1.12104192973356,2.09385244583617,6.3699893514535,2.41971369045464,3.00537437967808,2.18243053485457,0.700837921786577,0.129123323441576,0.140788722151667,0.234064526321993,0.34243593645101,0.239316476986009,0.171200729931206,0,0.333109761815663,0.607425802169478,0,0.315462165358238,0.274228867211478,0,1.44573593256819,0.496454756004426,0.261199789138935,3.19984845586813,2.98232065387321,4.01962374880514,4.30761996159075,2.58565479223067,4.75058548640935,4.78857246543868,3.10422714917427,0,0,0,1.1554064790051,1.49611180822643,1.22501613757421,0,0,0.523523743973798,0.588231488031014,1.36609096991689,0.971020706062307,2.89562681343828,1.31790010585369,3.12029478674859,0.782391344348039,0.218025156380447,1.31811709640683,1.1665793944457,0.699932108126813,0,0,0.725362142011344,0,1.02903774414379,0.573066879877513,1.03134418455488,2.02316460859598,0.528990979272033,1.90149421051854,0.338844532069132,0,0,0,0.7104801149461,0.299600110518405,1.15265491596466,1.45165457231869,1.21505344498522,0.841299845405528,1.99955689082663,2.87129103237098,1.46988959057945,0.287536413054709,1.83843757322004,3.30347642998166,5.10749352340751,3.84016333140609,1.05509030184155,1.37231465403614,3.64639359389732,3.07101298901519,5.6276261003168,2.75036845998258,3.83017161115768,4.9830088279686,2.23679334990361,1.8931548333296,3.55186332501892,1.15945795480671,3.44169550792555,0.679971333707751,1.07940638327563,1.29955283489534,1.34408066129201,1.40444420131752,0.852151612890289,2.07828803682295,2.12003744706204,1.12674735821344,0,5.09610479413291,0,2.38140145112336,0.253359865475099,1.01104889002957,2.05530983494308,0.258937883647172,1.63286352971307,0.520455980298408,0.913396434936424,0,1.3565037649736,0.587943535678524,1.38233250462643,1.23597483867187,3.61498392299779,0.884610551949874,0.323533699894818,1.10420759230197,0.484875253135222,1.86391761218122,3.22058876712702,2.51336048176146,2.29911349687732,0.838705871541442,1.19980546198682,0.635351135365324,4.49371918214468,4.11750542536764,4.39790232395025,3.12883776346098,2.55715457330331,2.49345653471472,4.2182728397617,0.81471491080253,0.746441823660558,0.505445516867349,2.73574412652416,1.17108398666433,1.37941262660084,0.900310649026746,1.65775299619287,2.65342346690179,1.7935920839879,3.46696380870997,3.62184719034622,1.29340795759705,1.32374256117473,1.40760899331159,0.657587197282725,1.11218899690239,2.43776516565517,0.411564272815887,0.59710280045548,0,1.02939162845886,0.284163499395593,0.828503090142008,0.938104239924385,0.900310307305074,0.710234206755631,0.590292695242212,1.07986979021165,0.232533944750408,0.804820204198858,1.5179494507732,0.822799249567402,1.31333971263276,1.37816976227955,0.584799949701329,1.09775057645525,0.536825675041487,5.25724871410318,2.46971069710283,1.98251269790279,1.32225283331772,0.426576501070468,1.16118335930219,1.67527699718721,0.80673409849337,0.889512175379481,1.33157938278791,4.2707615539006,1.31759163779209,1.50801125280162,1.1937388322469,1.55971269695296,0,2.37751854862164,1.39398891278057,1.32767530667157,0.799739588268102,1.1270773567308,0.610953983535943,0.387904974335251,1.1221731182451,1.13825766823663,1.47610147979602,2.35498091762062,2.59134044235781,1.1858105083486,0.166845105716094,0.786235980452812,0.449724224769707,0.202860121388503,0.72353147925725,0.25462585178142,0.287696137450811,0.972811360650212,0.549122826376163,0,1.48856379067401,0.312037673114561,1.26289438973556,0.717589654087649,0.964887042726734,1.29327233116623,1.13694847062291,1.30371981153621,1.69745085775188,0.938760993154008,1.17254380209271,0.952174563544055,1.36593553500459,1.10344600874334,1.99318220683897,0.956728611944923,0.491589944147214,1.72684981865896,1.3018415272336,0,0.54390568381871,2.95058563811422,1.93155722413313,4.65596710964597,5.15731421005694,1.47541450839008,0.504941854408746,0.94652465824877,2.34263246577983,1.29254038639679,1.91175038362042,1.33679204449436,1.98153571552183,2.02405350837447,0.584511715822624,1.18586333383957,7.06906896127976,0.99358059645788,0.35613120733451,1.79175655288934,0.659880491890142,1.32745138339963,0.485561272309963,1.209294227859,1.32023555829129,0.885905678642318,0.307435147943927,1.03371317267288,1.09060118843252,0.712994756769443,0.632073515871632,1.05418608574999,1.03135543248187,3.06395645178409,1.44048875225048,0.646793418913773,0.643011105094777,1.06404140185364,0.891844088010353,0.493647061806363,0.608929898229199,1.64270195644597,0.63549621259146,1.32317038832977,1.15420377059036,2.26050197374268,1.14594557363496,1.3130957840345,1.80554989719567,2.04036585640896,4.26478194624172,0.341741761595705,1.03193433981611,0.740778109478847,0.565105371014073,0.546776910884101,0.915112692826091,0.169978429993855,0.279902904647316,0.138199973804424,1.90934123603023,0.790839983952838,1.42323626988794,1.18805874903981,1.88179466413022,0.87345025498471,0.404593039154462,1.57041565878138,1.04702376793612,1.16653475962614,1.24267862617385,0,0.299033092087958,1.82004339502807,0.97225594172023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| |||
|short_description=p3@Itfg1 | |||
}} |
Latest revision as of 22:45, 25 September 2015
Short description: | p3@Itfg1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Itfg1_5end |
Coexpression cluster: | NA |
Association with transcript: | 154bp_to_ENSMUST00000034140, NM_028007, uc009mqf.2_5end |
EntrezGene: | Itfg1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 2.19e-16 | 95 |
ectoderm | 2.19e-16 | 95 |
presumptive ectoderm | 2.19e-16 | 95 |
ecto-epithelium | 6.31e-14 | 73 |
neurectoderm | 5.78e-13 | 64 |
neural plate | 5.78e-13 | 64 |
presumptive neural plate | 5.78e-13 | 64 |
nervous system | 8.83e-13 | 75 |
regional part of nervous system | 1.71e-12 | 54 |
central nervous system | 5.31e-12 | 73 |
gray matter | 1.75e-11 | 34 |
neural tube | 2.12e-11 | 52 |
neural rod | 2.12e-11 | 52 |
future spinal cord | 2.12e-11 | 52 |
neural keel | 2.12e-11 | 52 |
pre-chordal neural plate | 1.69e-09 | 49 |
brain | 2.76e-09 | 47 |
future brain | 2.76e-09 | 47 |
brain grey matter | 3.70e-09 | 29 |
regional part of telencephalon | 3.70e-09 | 29 |
telencephalon | 3.70e-09 | 29 |
regional part of brain | 1.06e-08 | 46 |
anterior neural tube | 7.43e-08 | 40 |
adult organism | 1.15e-07 | 51 |
regional part of forebrain | 2.46e-07 | 39 |
forebrain | 2.46e-07 | 39 |
future forebrain | 2.46e-07 | 39 |
structure with developmental contribution from neural crest | 4.67e-07 | 92 |