FFCP PHASE1:Mm9::chr2:153051113..153051130,-: Difference between revisions
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{{FFCP|EntrezGene=241732|HGNC=|MCL_coexpression_id=13|UniProt=Q3UYP3,Q6PE20|association_with_transcript=46bp_to_ENSMUST00000099194,NM_198617,uc008nhi.2_5end|description=CAGE_peak_2_at_Tspyl3_5end|id=chr2:153051113..153051130,-|ontology_enrichment_celltype=CL:0000117!3.00e-13!23;CL:0000337!3.00e-13!23;CL:0000540!3.91e-10!33;CL:0000047!3.91e-10!33;CL:0000031!3.91e-10!33;CL:0000404!3.91e-10!33;CL:0000393!2.88e-09!39;CL:0000211!2.88e-09!39;CL:0002319!1.58e-08!43;CL:0000221!5.03e-08!44;CL:0000133!5.03e-08!44;CL:0000055!1.86e-07!50|ontology_enrichment_celltype_v019_2=CL:0000117,6.46e-17,23;CL:0000337,6.46e-17,23;CL:0000540,1.92e-10,33;CL:0000047,1.92e-10,33;CL:0000031,1.92e-10,33;CL:0000404,1.92e-10,33;CL:0000393,1.19e-09,39;CL:0000211,1.19e-09,39;CL:0002319,2.42e-08,43;CL:0000221,6.32e-08,44;CL:0000133,6.32e-08,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!4.01e-24!73;UBERON:0005743!4.01e-24!73;UBERON:0000073!2.09e-22!75;UBERON:0001016!2.09e-22!75;UBERON:0001049!2.87e-21!52;UBERON:0005068!2.87e-21!52;UBERON:0006241!2.87e-21!52;UBERON:0007135!2.87e-21!52;UBERON:0000153!5.35e-20!94;UBERON:0007811!5.55e-20!86;UBERON:0000955!9.04e-20!50;UBERON:0006238!9.04e-20!50;UBERON:0002616!2.99e-19!49;UBERON:0002346!6.29e-18!71;UBERON:0003075!6.29e-18!71;UBERON:0007284!6.29e-18!71;UBERON:0000033!2.09e-17!63;UBERON:0003080!9.84e-17!40;UBERON:0003056!3.43e-16!49;UBERON:0002020!4.18e-16!34;UBERON:0002780!4.25e-16!39;UBERON:0001890!4.25e-16!39;UBERON:0006240!4.25e-16!39;UBERON:0004121!2.45e-15!102;UBERON:0000924!2.45e-15!102;UBERON:0006601!2.45e-15!102;UBERON:0002791!7.59e-13!29;UBERON:0003528!7.59e-13!29;UBERON:0001893!7.59e-13!29;UBERON:0000956!3.65e-08!21;UBERON:0001869!3.65e-08!21;UBERON:0000203!3.65e-08!21;UBERON:0002619!2.66e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.56e-27,54;UBERON:0001017,2.52e-26,73;UBERON:0001049,3.81e-25,52;UBERON:0005068,3.81e-25,52;UBERON:0006241,3.81e-25,52;UBERON:0007135,3.81e-25,52;UBERON:0001016,5.78e-25,75;UBERON:0003080,4.40e-21,40;UBERON:0000955,7.50e-21,47;UBERON:0006238,7.50e-21,47;UBERON:0002346,8.58e-21,64;UBERON:0003075,8.58e-21,64;UBERON:0007284,8.58e-21,64;UBERON:0002780,2.99e-20,39;UBERON:0001890,2.99e-20,39;UBERON:0006240,2.99e-20,39;UBERON:0002020,3.11e-20,34;UBERON:0002616,3.38e-20,46;UBERON:0003056,1.53e-18,49;UBERON:0004121,5.14e-18,95;UBERON:0000924,5.14e-18,95;UBERON:0006601,5.14e-18,95;UBERON:0010371,1.33e-16,73;UBERON:0003528,5.70e-16,29;UBERON:0002791,5.70e-16,29;UBERON:0001893,5.70e-16,29;UBERON:0010314,1.91e-12,92;UBERON:0000956,7.20e-10,21;UBERON:0001869,7.20e-10,21;UBERON:0000203,7.20e-10,21;UBERON:0002619,1.00e-08,17;UBERON:0002021,9.82e-08,10;UBERON:0000411,9.82e-08,10;UBERON:0001950,9.82e-08,10;UBERON:0002420,1.06e-07,8;UBERON:0007245,1.06e-07,8;UBERON:0010009,1.06e-07,8;UBERON:0010011,1.06e-07,8;UBERON:0000454,1.06e-07,8|phase1_expression=1.44133962394315,0,0,0,0,0,0,2.96983643915625,0.422366166455,1.63845168425395,0.513653904676515,0.797721589953364,1.36960583944965,2.01066925563694,0.333109761815663,0.607425802169478,0,1.89277299214943,1.09691546884591,0,0.255129870453209,1.29078236561151,1.56719873483361,0.159992422793407,0.45881856213434,0,0,0,0.190023419456374,0.252030129759931,0,0,0,0,0,0,0,0,0.7813353445238,0,0,0,0,0.251793635951155,0.101376931219515,0.367093504323363,0.782391344348039,0.65407546914134,0.659058548203415,0.194429899074283,1.39986421625363,1.43752564364972,0.335565212115473,1.45072428402269,1.34437519656986,1.02903774414379,2.0057340795713,1.54701627683233,4.04632921719196,4.23192783417626,5.07065122804943,1.69422266034566,2.66788438833342,0.899899717281399,0.988866362566974,0,1.19840044207362,1.15265491596466,1.03689612308478,1.21505344498522,1.68259969081106,6.28432165688368,5.07997644188711,1.46988959057945,2.49198224647415,5.51531271966013,5.50579404996943,2.68143409978894,3.07213066512487,3.69281605644543,4.39140689291566,2.6045668527838,3.07101298901519,4.50210088025344,5.65353516774197,4.12480019663135,4.8406371471695,3.91438836233131,0.151452386666368,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0.776813650941515,0.29688427812965,0.867426633830679,2.13125834818499,0.230615497256059,0.904335843315735,0.587943535678524,0.125666591329675,0,0.144599356919912,0.884610551949874,0.161766849947409,0.441683036920787,0,0,0.878342391034642,1.25668024088073,0.255457055208591,0.958520996047362,1.19980546198682,0.889491589511453,4.19413790333504,4.11750542536764,5.40313714085317,2.60736480288415,2.30143911597297,5.61027720310812,3.73154905055843,1.01839363850316,0.497627882440372,0.252722758433675,0.631325567659422,1.04096354370163,1.14951052216736,1.26043490863744,0.452114453507145,1.08858398642125,1.40925092313335,0.843315521037559,0.776110112217047,1.94011193639558,0,2.28736461413134,2.19195732427575,0.278047249225598,0.348252166522167,1.23469281844766,0.199034266818493,0,1.02939162845886,1.13665399758237,0.828503090142008,0.703578179943289,0.180062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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=241732 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt=Q3UYP3,Q6PE20 | |||
|association_with_transcript=46bp_to_ENSMUST00000099194,NM_198617,uc008nhi.2_5end | |||
|cluster_id=chr2:153051113..153051130,- | |||
|description=CAGE_peak_2_at_Tspyl3_5end | |||
|id=chr2:153051113..153051130,- | |||
|ontology_enrichment_celltype=CL:0000117!3.00e-13!23;CL:0000337!3.00e-13!23;CL:0000540!3.91e-10!33;CL:0000047!3.91e-10!33;CL:0000031!3.91e-10!33;CL:0000404!3.91e-10!33;CL:0000393!2.88e-09!39;CL:0000211!2.88e-09!39;CL:0002319!1.58e-08!43;CL:0000221!5.03e-08!44;CL:0000133!5.03e-08!44;CL:0000055!1.86e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,6.46e-17,23;CL:0000337,6.46e-17,23;CL:0000540,1.92e-10,33;CL:0000047,1.92e-10,33;CL:0000031,1.92e-10,33;CL:0000404,1.92e-10,33;CL:0000393,1.19e-09,39;CL:0000211,1.19e-09,39;CL:0002319,2.42e-08,43;CL:0000221,6.32e-08,44;CL:0000133,6.32e-08,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.01e-24!73;UBERON:0005743!4.01e-24!73;UBERON:0000073!2.09e-22!75;UBERON:0001016!2.09e-22!75;UBERON:0001049!2.87e-21!52;UBERON:0005068!2.87e-21!52;UBERON:0006241!2.87e-21!52;UBERON:0007135!2.87e-21!52;UBERON:0000153!5.35e-20!94;UBERON:0007811!5.55e-20!86;UBERON:0000955!9.04e-20!50;UBERON:0006238!9.04e-20!50;UBERON:0002616!2.99e-19!49;UBERON:0002346!6.29e-18!71;UBERON:0003075!6.29e-18!71;UBERON:0007284!6.29e-18!71;UBERON:0000033!2.09e-17!63;UBERON:0003080!9.84e-17!40;UBERON:0003056!3.43e-16!49;UBERON:0002020!4.18e-16!34;UBERON:0002780!4.25e-16!39;UBERON:0001890!4.25e-16!39;UBERON:0006240!4.25e-16!39;UBERON:0004121!2.45e-15!102;UBERON:0000924!2.45e-15!102;UBERON:0006601!2.45e-15!102;UBERON:0002791!7.59e-13!29;UBERON:0003528!7.59e-13!29;UBERON:0001893!7.59e-13!29;UBERON:0000956!3.65e-08!21;UBERON:0001869!3.65e-08!21;UBERON:0000203!3.65e-08!21;UBERON:0002619!2.66e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,5.56e-27,54;UBERON:0001017,2.52e-26,73;UBERON:0001049,3.81e-25,52;UBERON:0005068,3.81e-25,52;UBERON:0006241,3.81e-25,52;UBERON:0007135,3.81e-25,52;UBERON:0001016,5.78e-25,75;UBERON:0003080,4.40e-21,40;UBERON:0000955,7.50e-21,47;UBERON:0006238,7.50e-21,47;UBERON:0002346,8.58e-21,64;UBERON:0003075,8.58e-21,64;UBERON:0007284,8.58e-21,64;UBERON:0002780,2.99e-20,39;UBERON:0001890,2.99e-20,39;UBERON:0006240,2.99e-20,39;UBERON:0002020,3.11e-20,34;UBERON:0002616,3.38e-20,46;UBERON:0003056,1.53e-18,49;UBERON:0004121,5.14e-18,95;UBERON:0000924,5.14e-18,95;UBERON:0006601,5.14e-18,95;UBERON:0010371,1.33e-16,73;UBERON:0003528,5.70e-16,29;UBERON:0002791,5.70e-16,29;UBERON:0001893,5.70e-16,29;UBERON:0010314,1.91e-12,92;UBERON:0000956,7.20e-10,21;UBERON:0001869,7.20e-10,21;UBERON:0000203,7.20e-10,21;UBERON:0002619,1.00e-08,17;UBERON:0002021,9.82e-08,10;UBERON:0000411,9.82e-08,10;UBERON:0001950,9.82e-08,10;UBERON:0002420,1.06e-07,8;UBERON:0007245,1.06e-07,8;UBERON:0010009,1.06e-07,8;UBERON:0010011,1.06e-07,8;UBERON:0000454,1.06e-07,8 | |||
|phase1_expression=1.44133962394315,0,0,0,0,0,0,2.96983643915625,0.422366166455,1.63845168425395,0.513653904676515,0.797721589953364,1.36960583944965,2.01066925563694,0.333109761815663,0.607425802169478,0,1.89277299214943,1.09691546884591,0,0.255129870453209,1.29078236561151,1.56719873483361,0.159992422793407,0.45881856213434,0,0,0,0.190023419456374,0.252030129759931,0,0,0,0,0,0,0,0,0.7813353445238,0,0,0,0,0.251793635951155,0.101376931219515,0.367093504323363,0.782391344348039,0.65407546914134,0.659058548203415,0.194429899074283,1.39986421625363,1.43752564364972,0.335565212115473,1.45072428402269,1.34437519656986,1.02903774414379,2.0057340795713,1.54701627683233,4.04632921719196,4.23192783417626,5.07065122804943,1.69422266034566,2.66788438833342,0.899899717281399,0.988866362566974,0,1.19840044207362,1.15265491596466,1.03689612308478,1.21505344498522,1.68259969081106,6.28432165688368,5.07997644188711,1.46988959057945,2.49198224647415,5.51531271966013,5.50579404996943,2.68143409978894,3.07213066512487,3.69281605644543,4.39140689291566,2.6045668527838,3.07101298901519,4.50210088025344,5.65353516774197,4.12480019663135,4.8406371471695,3.91438836233131,0.151452386666368,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0.776813650941515,0.29688427812965,0.867426633830679,2.13125834818499,0.230615497256059,0.904335843315735,0.587943535678524,0.125666591329675,0,0.144599356919912,0.884610551949874,0.161766849947409,0.441683036920787,0,0,0.878342391034642,1.25668024088073,0.255457055208591,0.958520996047362,1.19980546198682,0.889491589511453,4.19413790333504,4.11750542536764,5.40313714085317,2.60736480288415,2.30143911597297,5.61027720310812,3.73154905055843,1.01839363850316,0.497627882440372,0.252722758433675,0.631325567659422,1.04096354370163,1.14951052216736,1.26043490863744,0.452114453507145,1.08858398642125,1.40925092313335,0.843315521037559,0.776110112217047,1.94011193639558,0,2.28736461413134,2.19195732427575,0.278047249225598,0.348252166522167,1.23469281844766,0.199034266818493,0,1.02939162845886,1.13665399758237,0.828503090142008,0.703578179943289,0.180062061461015,1.18372367792605,0.196764231747404,0.308534225774757,0.232533944750408,0.268273401399619,0.233530684734339,0,0.164167464079095,0.324275238183423,0.146199987425332,0,0,2.52347938276953,2.6755199218614,0,0,0.639864751605702,1.39342003116263,1.15980715189884,0.605050573870028,0.444756087689741,1.52180500890047,0.949058123089023,0.823494773620054,0,0.198956472041151,0.19496408711912,0,0.216138049874694,0,1.51734320762465,0.685491075658373,0,1.62921062276251,0.581857461502877,0.49095073923223,0.632365371242573,0.147610147979602,0.470996183524124,0.123397163921801,0.296452627087149,0.333690211432188,0.393117990226406,0.224862112384854,0.405720242777006,0.241177159752417,0.25462585178142,0.575392274901621,0,0,0,0,0.312037673114561,0.252578877947112,0.179397413521912,0,0.369506380333209,1.13694847062291,1.30371981153621,0.509235257325564,0.469380496577004,0.670025029767263,0.952174563544055,0,0.788175720530955,1.32878813789265,0.797273843287435,0.491589944147214,0.345369963731791,1.15719246865209,3.01582567878545,0.54390568381871,0,0,2.88991061978026,3.5163505977661,0,0.504941854408746,0.631016438832513,0.390438744296638,0.215423397732799,0.955875191810208,0.222798674082394,1.13230612315533,0.809621403349789,0.876767573733936,0.395287777946524,2.57057053137446,0.425820255624806,1.78065603667255,1.62886959353576,0.494910368917606,0,0.971122544619926,0.604647113929502,0.377210159511796,2.65771703592696,0.307435147943927,0.258428293168221,0.363533729477506,0.356497378384721,0,0,0,3.06395645178409,1.08036656418786,1.16422815404479,1.50035924522115,1.06404140185364,1.42695054081656,1.64549020602121,2.74018454203139,0,0,0,0.16488625294148,0.161464426695906,0.422190474497091,0.358117032009409,0.164140899745061,0,2.22510362412612,0.170870880797853,0.82554747185289,0.740778109478847,0.941842285023455,0.410082683163076,0.457556346413045,2.03974115992626,2.09927178485487,2.62579950228405,0,1.26534397432454,1.42323626988794,0.432021363287205,0.418176592028937,0.218362563746178,0.539457385539283,0.0826534557253359,0,0.129614973291793,0,0,1.19613236835183,0.165458490457098,1.36115831840833,1.16243841129958,1.01373675294467,1.76035857968631,0.911430693907651,0.524296722128554,0,0,2.8441000856536,2.02725215290164,1.95150818613172,1.16928740680016,1.61124026100733,1.98681354781265,1.08175904567972,1.18151621739662,1.51449674922221,1.600342939755,1.10908803650525,1.8516997340553,1.53938946624527,1.8700304349051,0.226730383615211,0,0.0897138566094757,0,0.19318959403219,0.187682475451182,0.73260649706906,0.643105137237198,0,2.25900737046827,4.60325236507177,4.58316410751517,1.3748254587495,2.05524755931193,6.0431511791176,2.02506750069542,2.2516060161211,2.71885445390523,4.14208249401456,0.726511433089237,1.59609949360412,1.53660245178721,1.21553358534147,0.628839487883947,1.10306105070008,1.11123363900808,1.23621034343337,0.64183841918363,0.758091635291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| |||
|short_description=p2@Tspyl3 | |||
}} |
Latest revision as of 22:36, 25 September 2015
Short description: | p2@Tspyl3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Tspyl3_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | 46bp_to_ENSMUST00000099194, NM_198617, uc008nhi.2_5end |
EntrezGene: | Tspyl3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 6.46e-17 | 23 |
neuroblast (sensu Vertebrata) | 6.46e-17 | 23 |
neuron | 1.92e-10 | 33 |
neuronal stem cell | 1.92e-10 | 33 |
neuroblast | 1.92e-10 | 33 |
electrically signaling cell | 1.92e-10 | 33 |
electrically responsive cell | 1.19e-09 | 39 |
electrically active cell | 1.19e-09 | 39 |
neural cell | 2.42e-08 | 43 |
ectodermal cell | 6.32e-08 | 44 |
neurectodermal cell | 6.32e-08 | 44 |