FFCP PHASE2:Mm9::chr19:50753067..50753076,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=NA |DPIdataset=NA |EntrezGene=entrezgene:58178 |HGNC= |MCL_coexpression_id=2 |TSSclassifier=NA |UniProt=uniprot:E9QQ02,uniprot:E9QQ63,uniprot:E9PYT6,uniprot...") |
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|DHSsupport=NA | |DHSsupport=NA | ||
|DPIdataset=NA | |DPIdataset=NA | ||
|EntrezGene= | |EntrezGene=58178 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2 | |MCL_coexpression_id=2 | ||
|TSSclassifier=NA | |TSSclassifier=NA | ||
|UniProt= | |UniProt=E9QQ02,E9QQ63,E9PYT6,Q1HL25,Q1HL23 | ||
|association_with_transcript=25bp_to_ENSMUST00000072685,ENSMUST00000111756,ENSMUST00000164039,uc008hwa.2,uc008hwb.2,uc008hwc.2_5end | |association_with_transcript=25bp_to_ENSMUST00000072685,ENSMUST00000111756,ENSMUST00000164039,uc008hwa.2,uc008hwb.2,uc008hwc.2_5end | ||
|cluster_id=chr19:50753067..50753076,- | |cluster_id=chr19:50753067..50753076,- | ||
Latest revision as of 22:34, 25 September 2015
| Short description: | p3@Sorcs1 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_3_at_Sorcs1_5end |
| Coexpression cluster: | MCL_coexpression_mm9:2 |
| Association with transcript: | 25bp_to_ENSMUST00000072685, ENSMUST00000111756, ENSMUST00000164039, uc008hwa.2, uc008hwb.2, uc008hwc.2_5end |
| EntrezGene: | Sorcs1 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p3@Sorcs1 |
|---|
0.0
0.5
1.0
1.5
2.0
2.5
3.0
3.5
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| occipital lobe | 4.91e-22 | 10 |
| visual cortex | 4.91e-22 | 10 |
| neocortex | 4.91e-22 | 10 |
| pre-chordal neural plate | 9.64e-16 | 49 |
| neurectoderm | 1.67e-15 | 64 |
| neural plate | 1.67e-15 | 64 |
| presumptive neural plate | 1.67e-15 | 64 |
| central nervous system | 3.66e-15 | 73 |
| regional part of forebrain | 1.05e-14 | 39 |
| forebrain | 1.05e-14 | 39 |
Showing 1 to 10 of 41 entries
