FFCP PHASE1:Mm9::chr14:33135239..33135255,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=239017 | |EntrezGene=239017 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=E9Q7L0,B2RXT3 | |UniProt=E9Q7L0,B2RXT3 | ||
|association_with_transcript=34bp_to_ENSMUST00000022480,NM_001081130,uc007syt.1_5end | |association_with_transcript=34bp_to_ENSMUST00000022480,NM_001081130,uc007syt.1_5end | ||
|cluster_id=chr14:33135239..33135255,+ | |||
|description=CAGE_peak_2_at_Ogdhl_5end | |description=CAGE_peak_2_at_Ogdhl_5end | ||
|id=chr14:33135239..33135255,+ | |id=chr14:33135239..33135255,+ | ||
|ontology_enrichment_celltype=CL:0000221!3.68e-12!44;CL:0000133!3.68e-12!44;CL:0002319!1.11e-11!43;CL:0000540!1.64e-11!33;CL:0000047!1.64e-11!33;CL:0000031!1.64e-11!33;CL:0000404!1.64e-11!33;CL:0000393!1.30e-09!39;CL:0000211!1.30e-09!39;CL:0000055!1.76e-09!50 | |ontology_enrichment_celltype=CL:0000221!3.68e-12!44;CL:0000133!3.68e-12!44;CL:0002319!1.11e-11!43;CL:0000540!1.64e-11!33;CL:0000047!1.64e-11!33;CL:0000031!1.64e-11!33;CL:0000404!1.64e-11!33;CL:0000393!1.30e-09!39;CL:0000211!1.30e-09!39;CL:0000055!1.76e-09!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000221,1.53e-12,44;CL:0000133,1.53e-12,44;CL:0000540,2.81e-12,33;CL:0000047,2.81e-12,33;CL:0000031,2.81e-12,33;CL:0000404,2.81e-12,33;CL:0002319,5.59e-12,43;CL:0000393,1.39e-10,39;CL:0000211,1.39e-10,39;CL:0000107,1.77e-07,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.59e-27!73;UBERON:0005743!3.59e-27!73;UBERON:0000073!5.93e-26!75;UBERON:0001016!5.93e-26!75;UBERON:0004121!8.06e-26!102;UBERON:0000924!8.06e-26!102;UBERON:0006601!8.06e-26!102;UBERON:0002346!5.32e-22!71;UBERON:0003075!5.32e-22!71;UBERON:0007284!5.32e-22!71;UBERON:0000033!1.52e-19!63;UBERON:0001049!9.64e-17!52;UBERON:0005068!9.64e-17!52;UBERON:0006241!9.64e-17!52;UBERON:0007135!9.64e-17!52;UBERON:0000955!1.31e-16!50;UBERON:0006238!1.31e-16!50;UBERON:0002616!2.92e-16!49;UBERON:0003056!2.38e-14!49;UBERON:0003080!2.23e-11!40;UBERON:0002780!9.09e-11!39;UBERON:0001890!9.09e-11!39;UBERON:0006240!9.09e-11!39;UBERON:0002020!1.61e-08!34;UBERON:0007811!5.75e-08!86;UBERON:0000153!2.64e-07!94;UBERON:0002791!4.55e-07!29;UBERON:0003528!4.55e-07!29;UBERON:0001893!4.55e-07!29 | |ontology_enrichment_uberon=UBERON:0001017!3.59e-27!73;UBERON:0005743!3.59e-27!73;UBERON:0000073!5.93e-26!75;UBERON:0001016!5.93e-26!75;UBERON:0004121!8.06e-26!102;UBERON:0000924!8.06e-26!102;UBERON:0006601!8.06e-26!102;UBERON:0002346!5.32e-22!71;UBERON:0003075!5.32e-22!71;UBERON:0007284!5.32e-22!71;UBERON:0000033!1.52e-19!63;UBERON:0001049!9.64e-17!52;UBERON:0005068!9.64e-17!52;UBERON:0006241!9.64e-17!52;UBERON:0007135!9.64e-17!52;UBERON:0000955!1.31e-16!50;UBERON:0006238!1.31e-16!50;UBERON:0002616!2.92e-16!49;UBERON:0003056!2.38e-14!49;UBERON:0003080!2.23e-11!40;UBERON:0002780!9.09e-11!39;UBERON:0001890!9.09e-11!39;UBERON:0006240!9.09e-11!39;UBERON:0002020!1.61e-08!34;UBERON:0007811!5.75e-08!86;UBERON:0000153!2.64e-07!94;UBERON:0002791!4.55e-07!29;UBERON:0003528!4.55e-07!29;UBERON:0001893!4.55e-07!29 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.57e-30,73;UBERON:0001016,1.28e-28,75;UBERON:0004121,2.73e-28,95;UBERON:0000924,2.73e-28,95;UBERON:0006601,2.73e-28,95;UBERON:0002346,1.53e-23,64;UBERON:0003075,1.53e-23,64;UBERON:0007284,1.53e-23,64;UBERON:0010314,7.70e-23,92;UBERON:0010371,2.85e-20,73;UBERON:0000073,4.62e-19,54;UBERON:0001049,1.22e-17,52;UBERON:0005068,1.22e-17,52;UBERON:0006241,1.22e-17,52;UBERON:0007135,1.22e-17,52;UBERON:0000955,2.75e-15,47;UBERON:0006238,2.75e-15,47;UBERON:0002616,7.06e-15,46;UBERON:0003056,7.62e-15,49;UBERON:0003080,2.70e-11,40;UBERON:0002780,1.36e-10,39;UBERON:0001890,1.36e-10,39;UBERON:0006240,1.36e-10,39;UBERON:0002020,5.20e-08,34;UBERON:0003076,1.33e-07,12;UBERON:0003057,1.33e-07,12;UBERON:0002410,1.77e-07,9 | |||
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|phase1_expression=7.68714466103011,0,0,0,0,0.33575854382378,0.233612640595526,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,3.91199134694921,0,0,0.159992422793407,0,0,0.86152399231815,0.215471232685889,0,0.252030129759931,0,0,0,0,0.288851619751275,0.166234645358492,0.612508068787107,0,0,0,0,0,0,1.1330713617802,1.01376931219515,1.46837401729345,3.12956537739216,1.74420125104357,0.878744730937887,1.1665793944457,2.51975558925653,1.43752564364972,0,0,0,0.257259436035947,0,0,2.63011399117477,3.1739458756322,1.90149421051854,5.42151251310611,2.66788438833342,0.899899717281399,0,0,1.49800055259202,1.15265491596466,0.414758449233911,0.675029691658453,1.05162480675691,3.42781181284564,1.54607978666129,0.734944795289724,0.766763768145891,0,6.60695285996332,10.9811110753261,9.67721159514334,5.01167893374737,2.8361169516747,2.08365348222704,14.2383329490704,7.87867654044352,8.25110537994775,1.76777151284201,2.27794689278565,3.35519002485541,0.227178579999552,0.0755715601067855,0.289864488701678,0,0,0,0,0,1.26399978118577,0,0.259786004602869,0,4.92951969218382,0,0,0,0,0,0,0.5709193985953,0,1.1875371125186,1.21439728736295,2.13125834818499,0.691846491768175,1.50722640552623,1.29347577849275,0.376999773989026,4.20231445148436,0,0,0.323533699894818,0,0.484875253135222,0,7.90508151931177,7.95897485891129,0.255457055208591,0,0,0,16.926342252745,8.6925114535539,1.00523481690292,6.43149984711423,5.8814555185976,11.8439185398949,10.3834408363365,1.42575109390443,0.497627882440372,1.0108910337347,1.26265113531884,2.08192708740326,2.75882525320168,1.80062129805349,1.50704817835715,4.21826294738233,2.94661556655154,4.31027932974753,4.9153640440413,0.862271971731369,1.13463648100692,1.23165786914764,0.876782929710299,0.278047249225598,0.696504333044333,0,1.39323986772945,0,0,0,1.03562886267751,1.87620847984877,1.08037236876609,0.23674473558521,1.57411385397923,0.771335564436891,0.232533944750408,1.07309360559848,0.700592054203017,0.329119699826961,0.820837320395476,9.80932595504854,26.4621977239851,18.0031094538662,29.1227928710007,2.73376933133365,0.617427674275707,0,0,0.213288250535234,1.16118335930219,1.41754207454303,3.83198696784351,3.33567065767305,1.71203063501303,0,0.988193728344065,2.26201687920243,2.58643413653496,1.16978452271472,0,0.432276099749388,0.199141273254367,0.758671603812327,1.02823661348756,0,0.610953983535943,1.55161989734101,0.631222379012867,0.69560190836683,0.295220295959204,0.941992367048249,0.493588655687202,0,0.333690211432188,0.196558995113203,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0.947457058852424,0.325929952884052,0.339490171550376,0,0.502518772325447,0.238043640886014,0,0,0.221464689648775,0.318909537314974,0,0,0,0,0,0,0,17.3394637186815,19.1055049145291,1.3114795630134,0.504941854408746,3.47059041357882,6.24701990874622,6.46270193198397,8.84184552424442,6.23836287430704,5.94460714656548,6.8817819284732,11.1057226006299,7.51046778098395,2.57057053137446,1.27746076687442,3.38324646967785,2.76907830901079,0.494910368917606,1.32745138339963,1.45668381692989,1.209294227859,0.188605079755898,1.18120757152309,1.53717573971964,4.39328098385976,0.727067458955011,0.356497378384721,0.316036757935816,0,0,17.0219802876894,1.44048875225048,3.75140182969988,1.28602221018955,1.24138163549592,3.21063871683727,2.63278432963394,9.74287837166718,0.469343416127421,0.847328283455281,0.220528398054962,0.32977250588296,0.322928853391811,0.241251699712623,0,0.164140899745061,0.582961673259701,13.7214723487777,0,0.412773735926445,0.185194527369712,0,0,0,0,0,0,0,1.89801596148681,1.01659733563424,0.540026704109006,0.836353184057875,0.218362563746178,0,0.165306911450672,0.523511883968059,0.129614973291793,0,5.07323644815771,2.54178128274764,1.98550188548517,1.16670713006429,2.0665571756437,1.01373675294467,1.64300134104056,2.47388331203505,3.04092098834561,3.14059357073808,8.06484017522023,0,1.41907650703115,0.205421914329655,0.51968329191118,0.537080087002444,0,0,0,0.201932899896295,0,0,0,0,0,0.226730383615211,1.55390167361845,1.70456327558004,2.3503846290971,0.19318959403219,1.31377732815827,0.36630324853453,0,0,1.12950368523413,3.68260189205742,1.71868654031819,4.64003592327956,4.11049511862385,4.5323633843382,2.70009000092722,4.95353323546643,4.53142408984205,3.62432218226274,2.07574695168353,1.59609949360412,1.02440163452481,0.729320151204882,0.838452650511929,0.919217542250071,0.222246727801615,0.412070114477788,0.64183841918363,0.252697211763798,0.50695859978048,1.50901073108861,1.12369808963859,0.640251524048693,0.459483751644906,0.476293691283074,1.0429589335037,0.77163688185482,0.824171801606613,0.588795680537589,1.02860775715625,0.70990322463735,0.238436189947321,0.290692833264657,0.376437521661322,0.592302255241736,1.46342378298218,1.31534855718921,0.679020569229309,0,1.18635018124174,0.985044823755635,0.818462086339379,0.464810523557898,0.771626443924566,1.49886346762768,0.701794825336225,1.28922632428979,2.29545998482612,0.441182838239031,0.695603506861264 | ||
|short_description=p2@Ogdhl | |short_description=p2@Ogdhl | ||
}} | }} |
Latest revision as of 21:50, 25 September 2015
Short description: | p2@Ogdhl |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Ogdhl_5end |
Coexpression cluster: | NA |
Association with transcript: | 34bp_to_ENSMUST00000022480, NM_001081130, uc007syt.1_5end |
EntrezGene: | Ogdhl |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 1.53e-12 | 44 |
neurectodermal cell | 1.53e-12 | 44 |
neuron | 2.81e-12 | 33 |
neuronal stem cell | 2.81e-12 | 33 |
neuroblast | 2.81e-12 | 33 |
electrically signaling cell | 2.81e-12 | 33 |
neural cell | 5.59e-12 | 43 |
electrically responsive cell | 1.39e-10 | 39 |
electrically active cell | 1.39e-10 | 39 |
autonomic neuron | 1.77e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 3.57e-30 | 73 |
nervous system | 1.28e-28 | 75 |
ectoderm-derived structure | 2.73e-28 | 95 |
ectoderm | 2.73e-28 | 95 |
presumptive ectoderm | 2.73e-28 | 95 |
neurectoderm | 1.53e-23 | 64 |
neural plate | 1.53e-23 | 64 |
presumptive neural plate | 1.53e-23 | 64 |
structure with developmental contribution from neural crest | 7.70e-23 | 92 |
ecto-epithelium | 2.85e-20 | 73 |
regional part of nervous system | 4.62e-19 | 54 |
neural tube | 1.22e-17 | 52 |
neural rod | 1.22e-17 | 52 |
future spinal cord | 1.22e-17 | 52 |
neural keel | 1.22e-17 | 52 |
brain | 2.75e-15 | 47 |
future brain | 2.75e-15 | 47 |
regional part of brain | 7.06e-15 | 46 |
pre-chordal neural plate | 7.62e-15 | 49 |
anterior neural tube | 2.70e-11 | 40 |
regional part of forebrain | 1.36e-10 | 39 |
forebrain | 1.36e-10 | 39 |
future forebrain | 1.36e-10 | 39 |
gray matter | 5.20e-08 | 34 |
posterior neural tube | 1.33e-07 | 12 |
chordal neural plate | 1.33e-07 | 12 |
autonomic nervous system | 1.77e-07 | 9 |