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FFCP PHASE1:Mm9::chr5:29895978..29895988,+: Difference between revisions

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{{FFCP|EntrezGene=100763|HGNC=|MCL_coexpression_id=60|UniProt=Q80U95|association_with_transcript=196bp_to_ENSMUST00000049453,NM_133907,uc008wul.1,uc008wum.1,uc008wun.1_5end|description=CAGE_peak_6_at_Ube3c_5end|id=chr5:29895978..29895988,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002610,3.73e-07,3;CL:0000117,9.50e-07,23;CL:0000337,9.50e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.97e-10!75;UBERON:0001016!1.97e-10!75;UBERON:0000025!3.63e-10!114;UBERON:0004111!4.71e-10!122;UBERON:0001017!7.33e-10!73;UBERON:0005743!7.33e-10!73;UBERON:0001049!1.76e-09!52;UBERON:0005068!1.76e-09!52;UBERON:0006241!1.76e-09!52;UBERON:0007135!1.76e-09!52;UBERON:0000955!4.97e-09!50;UBERON:0006238!4.97e-09!50;UBERON:0002616!1.67e-08!49;UBERON:0004121!7.35e-08!102;UBERON:0000924!7.35e-08!102;UBERON:0006601!7.35e-08!102;UBERON:0000033!2.42e-07!63;UBERON:0002346!2.59e-07!71;UBERON:0003075!2.59e-07!71;UBERON:0007284!2.59e-07!71;UBERON:0002020!2.86e-07!34|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.72e-17,54;UBERON:0001049,1.13e-14,52;UBERON:0005068,1.13e-14,52;UBERON:0006241,1.13e-14,52;UBERON:0007135,1.13e-14,52;UBERON:0001017,1.23e-13,73;UBERON:0001016,4.35e-13,75;UBERON:0002020,5.20e-13,34;UBERON:0002346,6.98e-12,64;UBERON:0003075,6.98e-12,64;UBERON:0007284,6.98e-12,64;UBERON:0000955,8.30e-11,47;UBERON:0006238,8.30e-11,47;UBERON:0004121,1.00e-09,95;UBERON:0000924,1.00e-09,95;UBERON:0006601,1.00e-09,95;UBERON:0002616,1.07e-09,46;UBERON:0010371,1.11e-09,73;UBERON:0002021,2.21e-09,10;UBERON:0000411,2.21e-09,10;UBERON:0001950,2.21e-09,10;UBERON:0003080,5.54e-09,40;UBERON:0003528,8.26e-09,29;UBERON:0002791,8.26e-09,29;UBERON:0001893,8.26e-09,29;UBERON:0010314,9.16e-09,92;UBERON:0002240,3.53e-08,6;UBERON:0005174,3.53e-08,6;UBERON:0001137,3.53e-08,6;UBERON:0002780,3.93e-08,39;UBERON:0001890,3.93e-08,39;UBERON:0006240,3.93e-08,39;UBERON:0000025,5.11e-08,114;UBERON:0003056,1.51e-07,49;UBERON:0003076,3.06e-07,12;UBERON:0003057,3.06e-07,12;UBERON:0004684,3.73e-07,3;UBERON:0002275,3.73e-07,3;UBERON:0004111,4.91e-07,122|phase1_expression=0.640595388419176,0,0,0,0,0.503637815735669,0.934450562382103,0.387369970324729,0.140788722151667,0,0.34243593645101,0.957265907944037,0,0.174840804837995,0,0.607425802169478,0,0,0.137114433605739,0,2.29616883407888,0.0992909512008853,0,0.159992422793407,0,0,0.430761996159075,0.215471232685889,0.380046838912748,0.252030129759931,0.221730510655305,0,0,0,0.577703239502549,0.332469290716985,0,0,0,0.523523743973798,0,0,0,0.503587271902309,0.506884656097573,0.183546752161682,0,0.65407546914134,0.659058548203415,0.194429899074283,0,0,0.167782606057736,0,0,0.771778308107841,1.14613375975503,0,0.606949382578793,0.528990979272033,0.633831403506179,0,0,0,0,0.7104801149461,0.898800331555214,0,0.207379224616955,0.270011876663381,0,0.571301968807607,1.76694832761291,0.244981598429908,0.575072826109418,0,2.20231761998777,3.83062014255563,2.15049146558741,0.527545150920775,1.37231465403614,0,1.95428099300967,0.56276261003168,1.37518422999129,1.76777151284201,2.98980529678116,1.4911955666024,0.757261933331841,0.755715601067855,0.289864488701678,0,0,1.07940638327563,0,0.448026887097336,0.561777680527007,0.852151612890289,0,0.70667914902068,0.704217098883403,0,2.54805239706646,0,0.432982082022428,0.506719730950197,0.505524445014783,0.79928715803342,0,0.29688427812965,0.346970653532272,0.304465478312141,0.691846491768175,0.452167921657868,0.823120949949934,0.376999773989026,0.741584903203122,0.289198713839823,0,0.647067399789637,0.220841518460394,0.969750506270444,0,0.292780797011547,0.628340120440365,0.255457055208591,0.239630249011841,0,0.254140454146129,1.19832511523858,0.915001205637253,1.50785222535437,2.08589184230732,2.55715457330331,2.90903262383384,1.62241263067758,0.305518091550949,0.870848794270651,0.758168275301024,1.05220927943237,0.130120442962704,0,0.180062129805349,0.30140963567143,0.476255494059295,0.384341160854549,0.187403449119458,0.258703370739016,0.215567992932842,0.378212160335639,0.175951124163949,0,0,0.348252166522167,0,0.199034266818493,0,0,0,0.621377317606506,0.234526059981096,0,0.710234206755631,0,0.771335564436891,0.465067889500816,1.07309360559848,0.350296027101508,0.822799249567402,0.656669856316381,1.13496333364198,0.292399974850665,0.658650345873152,0.805238512562231,2.3131894342054,0.514523061896422,0,0.264450566663544,0.213288250535234,0,0.515469845288373,0.201683524623343,0.22237804384487,0.190225626112559,0.949058123089023,0.494096864172033,0.502670417600539,0.596869416123452,0.38992817423824,0,0.432276099749388,0.199141273254367,0.189667900953082,0.342745537829186,1.1270773567308,0.203651327845314,0.193952487167626,0.701358198903186,0.442655759869801,0.295220295959204,0.156998727841375,0.493588655687202,0.296452627087149,0.667380422864376,0.196558995113203,0,0.608580364165509,0,0.50925170356284,0.287696137450811,0.486405680325106,0.823684239564244,1.43768206527355,0.372140947668503,0.624075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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=100763
|HGNC=
|MCL_coexpression_id=60
|TSSclassifier=NA
|UniProt=Q80U95
|association_with_transcript=196bp_to_ENSMUST00000049453,NM_133907,uc008wul.1,uc008wum.1,uc008wun.1_5end
|cluster_id=chr5:29895978..29895988,+
|description=CAGE_peak_6_at_Ube3c_5end
|id=chr5:29895978..29895988,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0002610,3.73e-07,3;CL:0000117,9.50e-07,23;CL:0000337,9.50e-07,23
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!1.97e-10!75;UBERON:0001016!1.97e-10!75;UBERON:0000025!3.63e-10!114;UBERON:0004111!4.71e-10!122;UBERON:0001017!7.33e-10!73;UBERON:0005743!7.33e-10!73;UBERON:0001049!1.76e-09!52;UBERON:0005068!1.76e-09!52;UBERON:0006241!1.76e-09!52;UBERON:0007135!1.76e-09!52;UBERON:0000955!4.97e-09!50;UBERON:0006238!4.97e-09!50;UBERON:0002616!1.67e-08!49;UBERON:0004121!7.35e-08!102;UBERON:0000924!7.35e-08!102;UBERON:0006601!7.35e-08!102;UBERON:0000033!2.42e-07!63;UBERON:0002346!2.59e-07!71;UBERON:0003075!2.59e-07!71;UBERON:0007284!2.59e-07!71;UBERON:0002020!2.86e-07!34
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.72e-17,54;UBERON:0001049,1.13e-14,52;UBERON:0005068,1.13e-14,52;UBERON:0006241,1.13e-14,52;UBERON:0007135,1.13e-14,52;UBERON:0001017,1.23e-13,73;UBERON:0001016,4.35e-13,75;UBERON:0002020,5.20e-13,34;UBERON:0002346,6.98e-12,64;UBERON:0003075,6.98e-12,64;UBERON:0007284,6.98e-12,64;UBERON:0000955,8.30e-11,47;UBERON:0006238,8.30e-11,47;UBERON:0004121,1.00e-09,95;UBERON:0000924,1.00e-09,95;UBERON:0006601,1.00e-09,95;UBERON:0002616,1.07e-09,46;UBERON:0010371,1.11e-09,73;UBERON:0002021,2.21e-09,10;UBERON:0000411,2.21e-09,10;UBERON:0001950,2.21e-09,10;UBERON:0003080,5.54e-09,40;UBERON:0003528,8.26e-09,29;UBERON:0002791,8.26e-09,29;UBERON:0001893,8.26e-09,29;UBERON:0010314,9.16e-09,92;UBERON:0002240,3.53e-08,6;UBERON:0005174,3.53e-08,6;UBERON:0001137,3.53e-08,6;UBERON:0002780,3.93e-08,39;UBERON:0001890,3.93e-08,39;UBERON:0006240,3.93e-08,39;UBERON:0000025,5.11e-08,114;UBERON:0003056,1.51e-07,49;UBERON:0003076,3.06e-07,12;UBERON:0003057,3.06e-07,12;UBERON:0004684,3.73e-07,3;UBERON:0002275,3.73e-07,3;UBERON:0004111,4.91e-07,122
|phase1_expression=0.640595388419176,0,0,0,0,0.503637815735669,0.934450562382103,0.387369970324729,0.140788722151667,0,0.34243593645101,0.957265907944037,0,0.174840804837995,0,0.607425802169478,0,0,0.137114433605739,0,2.29616883407888,0.0992909512008853,0,0.159992422793407,0,0,0.430761996159075,0.215471232685889,0.380046838912748,0.252030129759931,0.221730510655305,0,0,0,0.577703239502549,0.332469290716985,0,0,0,0.523523743973798,0,0,0,0.503587271902309,0.506884656097573,0.183546752161682,0,0.65407546914134,0.659058548203415,0.194429899074283,0,0,0.167782606057736,0,0,0.771778308107841,1.14613375975503,0,0.606949382578793,0.528990979272033,0.633831403506179,0,0,0,0,0.7104801149461,0.898800331555214,0,0.207379224616955,0.270011876663381,0,0.571301968807607,1.76694832761291,0.244981598429908,0.575072826109418,0,2.20231761998777,3.83062014255563,2.15049146558741,0.527545150920775,1.37231465403614,0,1.95428099300967,0.56276261003168,1.37518422999129,1.76777151284201,2.98980529678116,1.4911955666024,0.757261933331841,0.755715601067855,0.289864488701678,0,0,1.07940638327563,0,0.448026887097336,0.561777680527007,0.852151612890289,0,0.70667914902068,0.704217098883403,0,2.54805239706646,0,0.432982082022428,0.506719730950197,0.505524445014783,0.79928715803342,0,0.29688427812965,0.346970653532272,0.304465478312141,0.691846491768175,0.452167921657868,0.823120949949934,0.376999773989026,0.741584903203122,0.289198713839823,0,0.647067399789637,0.220841518460394,0.969750506270444,0,0.292780797011547,0.628340120440365,0.255457055208591,0.239630249011841,0,0.254140454146129,1.19832511523858,0.915001205637253,1.50785222535437,2.08589184230732,2.55715457330331,2.90903262383384,1.62241263067758,0.305518091550949,0.870848794270651,0.758168275301024,1.05220927943237,0.130120442962704,0,0.180062129805349,0.30140963567143,0.476255494059295,0.384341160854549,0.187403449119458,0.258703370739016,0.215567992932842,0.378212160335639,0.175951124163949,0,0,0.348252166522167,0,0.199034266818493,0,0,0,0.621377317606506,0.234526059981096,0,0.710234206755631,0,0.771335564436891,0.465067889500816,1.07309360559848,0.350296027101508,0.822799249567402,0.656669856316381,1.13496333364198,0.292399974850665,0.658650345873152,0.805238512562231,2.3131894342054,0.514523061896422,0,0.264450566663544,0.213288250535234,0,0.515469845288373,0.201683524623343,0.22237804384487,0.190225626112559,0.949058123089023,0.494096864172033,0.502670417600539,0.596869416123452,0.38992817423824,0,0.432276099749388,0.199141273254367,0.189667900953082,0.342745537829186,1.1270773567308,0.203651327845314,0.193952487167626,0.701358198903186,0.442655759869801,0.295220295959204,0.156998727841375,0.493588655687202,0.296452627087149,0.667380422864376,0.196558995113203,0,0.608580364165509,0,0.50925170356284,0.287696137450811,0.486405680325106,0.823684239564244,1.43768206527355,0.372140947668503,0.624075346229121,1.51547326768267,0.538192240565737,0.482443521363367,0.369506380333209,0.757965647081939,0.651859905768103,0.509235257325564,0.234690248288502,0,0.714130922658041,0.585400943573396,0.315270288212382,1.55025282754142,0.797273843287435,0,0.690739927463582,0.433947175744535,0,0,0,0,1.60550589987792,2.10981035865966,0.491804836130026,0.504941854408746,0.315508219416257,0,0.646270193198397,0.477937595905104,0.668396022247182,0.283076530788832,0.404810701674894,0.292255857911312,0.395287777946524,3.21321316421807,0.283880170416537,0,0.162886959353576,0.329940245945071,0,0.728341908464944,0.302323556964751,0.188605079755898,0,0,0.516856586336442,0.727067458955011,0,0,0,0,0.680879211507576,0,0.517434735131018,0.857348140126369,0.354680467284547,0.535106452806212,0.329098041204242,0.608929898229199,0.938686832254841,0.42366414172764,0,0.16488625294148,0.322928853391811,0.422190474497091,0.477489376012546,0.164140899745061,0.291480836629851,1.66882771809459,0,0.412773735926445,0.185194527369712,0.188368457004691,0.27338845544205,0.228778173206523,0.169978429993855,0.139951452323658,0.414599921413271,0,0,0,0.432021363287205,0.418176592028937,0.436725127492355,0.269728692769641,0.826534557253359,0,0.648074866458964,0,13.5286305284206,0.299033092087958,0.496375471371293,0.194451188344048,0,0,0.234714477291508,0.5208175393758,0.629156066554265,2.41584120826006,5.76060012515731,0.316011120628178,0.405450430580328,0.205421914329655,0.25984164595559,0.179026695667481,0.198681354781265,0.240390899039938,0.147689527174577,0.302899349844443,0.381034033274999,0,0.194915761479505,0,0,0.680191150845634,1.10992976687032,0.897138566094757,0.671538465456314,0.386379188064381,0.563047426353546,0.183151624267265,0.428736758158132,0.501572104035363,3.95326289831947,0.920650473014354,0.572895513439397,2.40594455281163,4.11049511862385,1.5107877947794,2.02506750069542,1.80128481289688,0.453142408984205,1.55328093525546,0.31136204275253,0.399024873401031,0.170733605754134,1.21553358534147,0.838452650511929,0.367687016900028,0.44449345560323,0,0.320919209591815,1.26348605881899,0.50695859978048,1.50901073108861,0.37456602987953,0.512201219238954,0.459483751644906,1.42888107384922,0.579421629724277,0.77163688185482,0,0.441596760403192,0,0.70990322463735,0.238436189947321,0.290692833264657,0.376437521661322,0.846146078916765,0.182927972872773,0.526139422875686,0.950628796921032,0.561142271657738,0.711810108745045,0.886540341380071,0.409231043169689,0.619747364743864,0.385813221962283,0.249810577937946,0,0.214871054048298,0.382576664137687,1.10295709559758,0.463735671240843
|short_description=p6@Ube3c
}}

Latest revision as of 21:34, 25 September 2015

Short description:p6@Ube3c
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_6_at_Ube3c_5end
Coexpression cluster:MCL_coexpression_mm9:60
Association with transcript: 196bp_to_ENSMUST00000049453, NM_133907, uc008wul.1, uc008wum.1, uc008wun.1_5end
EntrezGene:Ube3c
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p6@Ube3c

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.93
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.39
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.96
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.17
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.61
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.30
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.38
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.50
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.51
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.77
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.15
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.61
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.77
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.24
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.58
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.83
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.53
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.37
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.95
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.38
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.77
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.99
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.49
Mouse Schwann, donor1.CNhs12507.11728-123D90.76
Mouse Schwann, donor2.CNhs12573.11746-123F90.76
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.85
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.70
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.80
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.82
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.74
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.65
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.63
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.25
corpora quadrigemina, adult.CNhs10501.16-22A41.20
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F11.51
cortex, adult.CNhs10473.12-14D52.09
cortex, neonate N30.CNhs11107.1392-42F22.56
diencephalon, adult.CNhs10482.20-12F22.91
diencephalon, neonate N30.CNhs11201.1388-42B21.62
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.87
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G41.05
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.48
eyeball, neonate N01.CNhs11140.1532-43E70.38
eyeball, neonate N02.CNhs11205.1551-44G80.19
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.77
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G31.07
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.82
heart, neonate N10.CNhs11118.749-24G10.66
heart, neonate N16.CNhs11209.782-15G11.13
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.66
heart, neonate N30.CNhs11202.1390-42D20.81
hippocampus, adult.CNhs10478.13-16E82.31
hippocampus, neonate N00.CNhs11228.627-43G10.51
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.70
kidney, neonate N10.CNhs11206.758-6D50.44
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.49
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.67
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.61
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.49
liver, neonate N03.CNhs11123.1345-25G20.82
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A31.52
liver, neonate N25.CNhs11198.1368-26H10.54
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.76
lung, embryo E14.CNhs10604.404-26F80.65
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.71
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A31.55
lung, neonate N10.CNhs11219.750-23E60.80
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.69
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C21.61
medulla oblongata, neonate N30.CNhs11200.1396-42A32.11
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.49
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I93.21
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.52
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.94
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.42
skin, neonate N06.CNhs11097.693-20I50.48
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C91.67
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.41
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.43
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.83
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.65
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G513.53
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.52
testis, neonate N10.CNhs11204.763-44D90.63
testis, neonate N20.CNhs11110.839-18H32.42
testis, neonate N30.CNhs11130.1391-42E25.76
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.30
thymus, neonate N07.CNhs11211.713-19D30.38
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.11
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.90
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.67
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.56
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.95
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.41
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.11
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.80
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.55
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.85
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D11.10
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
raphe nuclei neuron3.73e-073
CNS neuron (sensu Vertebrata)9.50e-0723
neuroblast (sensu Vertebrata)9.50e-0723

Uber anatomy
Ontology termp-valuen
regional part of nervous system2.72e-1754
neural tube1.13e-1452
neural rod1.13e-1452
future spinal cord1.13e-1452
neural keel1.13e-1452
central nervous system1.23e-1373
nervous system4.35e-1375
gray matter5.20e-1334
neurectoderm6.98e-1264
neural plate6.98e-1264
presumptive neural plate6.98e-1264
brain8.30e-1147
future brain8.30e-1147
ectoderm-derived structure1.00e-0995
ectoderm1.00e-0995
presumptive ectoderm1.00e-0995
regional part of brain1.07e-0946
ecto-epithelium1.11e-0973
occipital lobe2.21e-0910
visual cortex2.21e-0910
neocortex2.21e-0910
anterior neural tube5.54e-0940
brain grey matter8.26e-0929
regional part of telencephalon8.26e-0929
telencephalon8.26e-0929
structure with developmental contribution from neural crest9.16e-0992
spinal cord3.53e-086
dorsal region element3.53e-086
dorsum3.53e-086
regional part of forebrain3.93e-0839
forebrain3.93e-0839
future forebrain3.93e-0839
tube5.11e-08114
pre-chordal neural plate1.51e-0749
posterior neural tube3.06e-0712
chordal neural plate3.06e-0712
raphe nuclei3.73e-073
reticular formation3.73e-073
anatomical conduit4.91e-07122
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