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FFCP PHASE1:Mm9::chr19:46647586..46647697,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=56350
|EntrezGene=56350
|HGNC=
|HGNC=
|MCL_coexpression_id=60
|TSSclassifier=NA
|UniProt=Q9WUL7,Q543P7
|UniProt=Q9WUL7,Q543P7
|association_with_transcript=-11bp_to_ENSMUST00000026009,NM_019718,uc008htt.1_5end
|association_with_transcript=-11bp_to_ENSMUST00000026009,NM_019718,uc008htt.1_5end
|cluster_id=chr19:46647586..46647697,-
|description=CAGE_peak_1_at_Arl3_5end
|description=CAGE_peak_1_at_Arl3_5end
|id=chr19:46647586..46647697,-
|id=chr19:46647586..46647697,-
|ontology_enrichment_celltype=CL:0000117!2.00e-12!23;CL:0000337!2.00e-12!23;CL:0000221!2.96e-11!44;CL:0000133!2.96e-11!44;CL:0002319!3.02e-11!43;CL:0000540!5.04e-08!33;CL:0000047!5.04e-08!33;CL:0000031!5.04e-08!33;CL:0000404!5.04e-08!33;CL:0000055!5.39e-08!50
|ontology_enrichment_celltype_v019_2=CL:0000117,2.00e-12,23;CL:0000337,2.00e-12,23;CL:0000221,2.96e-11,44;CL:0000133,2.96e-11,44;CL:0002319,3.02e-11,43;CL:0000540,5.04e-08,33;CL:0000047,5.04e-08,33;CL:0000031,5.04e-08,33;CL:0000404,5.04e-08,33
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!5.90e-24!73;UBERON:0005743!5.90e-24!73;UBERON:0000073!7.20e-24!75;UBERON:0001016!7.20e-24!75;UBERON:0000033!5.77e-23!63;UBERON:0001049!3.18e-22!52;UBERON:0005068!3.18e-22!52;UBERON:0006241!3.18e-22!52;UBERON:0007135!3.18e-22!52;UBERON:0000955!1.94e-21!50;UBERON:0006238!1.94e-21!50;UBERON:0002616!6.00e-21!49;UBERON:0002346!1.32e-20!71;UBERON:0003075!1.32e-20!71;UBERON:0007284!1.32e-20!71;UBERON:0004121!4.29e-20!102;UBERON:0000924!4.29e-20!102;UBERON:0006601!4.29e-20!102;UBERON:0003056!1.50e-17!49;UBERON:0002020!1.07e-15!34;UBERON:0003080!1.25e-15!40;UBERON:0002780!4.30e-15!39;UBERON:0001890!4.30e-15!39;UBERON:0006240!4.30e-15!39;UBERON:0000025!1.73e-13!114;UBERON:0002791!2.99e-13!29;UBERON:0003528!2.99e-13!29;UBERON:0001893!2.99e-13!29;UBERON:0004111!5.19e-13!122;UBERON:0007811!5.68e-11!86;UBERON:0000153!1.18e-09!94;UBERON:0000956!5.46e-09!21;UBERON:0001869!5.46e-09!21;UBERON:0000203!5.46e-09!21;UBERON:0002619!8.84e-08!17;UBERON:0003076!2.36e-07!12;UBERON:0003057!2.36e-07!12;UBERON:0003103!7.56e-07!43
|ontology_enrichment_uberon_v019_2=UBERON:0010314,9.70e-26,92;UBERON:0001017,5.90e-24,73;UBERON:0001016,7.20e-24,75;UBERON:0000073,1.26e-23,54;UBERON:0002346,1.47e-23,64;UBERON:0003075,1.47e-23,64;UBERON:0007284,1.47e-23,64;UBERON:0001049,3.18e-22,52;UBERON:0005068,3.18e-22,52;UBERON:0006241,3.18e-22,52;UBERON:0007135,3.18e-22,52;UBERON:0004121,4.20e-22,95;UBERON:0000924,4.20e-22,95;UBERON:0006601,4.20e-22,95;UBERON:0000955,2.07e-19,47;UBERON:0006238,2.07e-19,47;UBERON:0010371,3.96e-19,73;UBERON:0002616,6.28e-19,46;UBERON:0003056,1.50e-17,49;UBERON:0002020,1.07e-15,34;UBERON:0003080,1.25e-15,40;UBERON:0002780,4.30e-15,39;UBERON:0001890,4.30e-15,39;UBERON:0006240,4.30e-15,39;UBERON:0000025,1.73e-13,114;UBERON:0003528,2.99e-13,29;UBERON:0002791,2.99e-13,29;UBERON:0001893,2.99e-13,29;UBERON:0004111,5.18e-13,122;UBERON:0000956,5.46e-09,21;UBERON:0001869,5.46e-09,21;UBERON:0000203,5.46e-09,21;UBERON:0002619,8.84e-08,17;UBERON:0003076,2.36e-07,12;UBERON:0003057,2.36e-07,12;UBERON:0003103,7.56e-07,43
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738,20.5352661798117,22.1410948684693,20.9088296014469,16.5955548447095,18.071822415566,14.7949685748351,27.4843739083231,11.7949625695532,21.7468759580424,498.868250735508,22.5769984526408,23.4951056449079,25.6675568614143,22.086329814692,31.9327077177571,22.1805181040475,22.2649498083155,20.4475721630136,172.732646390594,266.139725782268,17.0646005139216,28.9897057864935,29.5807556634702,27.0235311793814,22.3783369584352,21.2589049615953,15.385017538556,15.8027794076798,14.1353029927407,11.354814191595,15.9305372516208,11.79240356951,13.4696578296461,13.4408437508804,44.8926159558118,16.6489465030549,14.1747893442972,12.2555769945777,23.1827512838629,16.7037403151552,15.0184331899157,14.7914181564555,17.0534515372024,36.7088697701093,57.5406545633971,33.227939779485,41.4166169448287,63.7126743386697,76.2947836363598,87.077902529903,77.0049257513417,75.6747823003622,78.1818070745248,38.9202553440662,22.7444177838588,20.8294999020044,25.7693120092392,30.3939085810574,33.8272055548026,34.0037493536471,30.4931884713563,30.8082441208143,29.5655737763643,26.8688057883654,30.1802146217722,31.4635465098805,28.427167667762,31.8766852703654,27.1487404031352,32.911148568339,29.3222015104832,32.1427002626579,32.3837624295674,34.9726637433124,36.5600160688235,30.5198323132571,32.5575973256416,30.0208923524905,26.3997576622031,35.3050987644451,35.5144110441088,30.8275338430106,31.4239672128334,29.0655794404227,27.6797595475333,30.6923282377267,32.3817998078669,27.1998321483409,25.9803001055464,25.2646137121041,20.6276211886366,25.632636497225,32.6475300296883,38.0263250417491
|phase1_expression=21.780243206252,2.44282785347553,5.45999087267443,2.41971369045464,0.500895729946347,3.69334398206158,4.20502753071946,5.68142623142936,4.78681655315667,4.21316147379588,10.7867319982068,8.85470964848234,3.93761678841773,3.3219752919219,4.66353666541928,5.4668322195253,4.89693314689703,4.57420139769445,4.11343300817216,5.51706547337439,75.7735715246032,8.14185799847259,5.22399578277871,5.43974237497583,4.81759490241057,1.72269589234506,2.15380998079537,5.60225204983311,3.42042155021473,3.02436155711917,3.76941868114018,6.35030673459631,12.3012957516914,31.6963362030877,3.17736781726402,5.31950865147176,4.69589519403449,10.8818223991596,7.0320181007142,10.9939986234498,18.2351761289614,16.3930916390027,18.934903768215,8.05739635043695,8.61703915365874,18.1711284640065,59.461742170451,92.0066159925484,55.1412318663524,59.4955491167307,65.7936181639204,60.3760770332881,5.36904339384756,0.725362142011344,4.7053131879945,20.0662360108039,18.6246735960192,22.17389996793,70.40612837914,58.1890077199236,92.5393849119022,34.5621422710515,51.5790981744461,22.9474427906757,25.7105254267413,30.5506449426823,38.6484142568742,61.4749288514487,38.8836046156791,40.5017814995072,39.1204428113571,74.5549069293927,68.027510613097,50.8336816742059,62.1078652198172,59.7492211296514,71.5753226496027,109.555736077091,113.66883460962,70.2953913601933,87.0047490658916,75.0115253601734,101.901794635504,81.0378158445619,76.8575186317355,64.8182888042069,57.0910440004403,58.1566270974938,27.7157867599454,28.8683359607921,14.4932244350839,7.74381489283248,23.1190253460635,25.3660500069774,14.2950811838487,27.7776670000348,45.9253253830829,27.4392819350673,25.4590284510811,41.6940697922201,29.9996484124329,12.8326477414318,20.3844191765317,14.2213340630666,24.246996593256,19.5087096415826,16.6823066854878,27.1757633731363,11.1343289968284,27.3133535879278,19.2568712710411,15.8322048722313,21.6778567420695,23.6634545667617,15.7568867561844,21.3633205260448,11.8653584512499,44.8258006451726,16.8076004870476,24.912094891901,29.3719219552323,26.183263669302,16.775258509631,66.1684601246097,56.9695042532598,8.43008282188352,3.95389910869537,7.19883277192089,3.43089613097275,68.454322208004,114.375150704657,33.6753663662477,87.2598087365228,83.6189545470181,81.0373373782284,67.1678829100517,14.9703864859965,20.7759640918855,42.710146175291,58.5028359364398,35.6530013717808,32.8760009339866,42.8547868936731,31.6480117455002,30.5483881189462,29.7223831060852,39.1673208659667,101.670424700433,31.0417909823293,24.3946843416487,27.448375369576,19.2892244536266,18.6291656981151,18.1091126591527,18.314610140307,22.2918378836712,4.91549231119264,3.08817488537658,2.55747149456033,42.0465318247069,33.7717526372778,48.976880717396,44.2712655544343,49.7813506320932,54.9190921879067,56.0406806848483,58.483601505117,63.7538769324745,41.3045223282836,39.4001913789829,50.3437307279764,49.5617957371877,46.5446244417027,54.8904252729921,68.9751031290337,26.1377715443382,6.93879444265976,5.02456076660734,22.1819780556643,19.9723537799977,15.8506977426175,15.327947871374,12.8979265430025,16.9300807240178,6.64340686162316,10.0466362381647,10.0534083520108,11.1415624343044,11.1129529657898,6.29173586057955,8.21324589523838,7.36822711041159,33.1918826667893,26.8484004632863,15.7790829942313,37.8791469792285,34.717495203005,31.8416622302046,36.4242453835722,47.3828575014523,46.7856208967297,42.4486243890994,15.1190839814446,18.1861165230543,16.9040735797355,14.6160373050155,14.4030686185837,16.8824011826692,17.0599320693551,19.5633373466551,10.8630601939274,15.9245619649087,15.814502718009,12.2806512730606,14.6657706363843,16.4176270665623,24.9362404795458,19.7801843758981,32.8860678496556,21.9810037653762,27.0521860893763,22.4063513223248,31.4484932706593,30.8211513692941,33.0880660831559,21.6598349122157,22.8570958953977,21.9250042752287,19.4534817762134,27.529036872244,24.6939524068231,22.2759550215528,9.04747703635634,7.61467957346193,14.7529281905711,11.5893433447988,81.5596997137983,69.9753768955453,40.1640616172855,67.1572666363632,27.1337068697981,25.3785183792815,22.6194567619439,17.9226598464414,20.0518806674155,19.5322806244294,14.5731852602962,18.704374906324,22.1361155650053,58.8018009051907,19.019971417908,21.1898068364034,14.0082785044075,19.4664745107592,49.1157011857862,27.4342118855129,28.1160907977218,45.2652191414155,50.2013217897314,52.2639751504677,17.8315522286073,22.5390912276053,25.6678112436999,45.8253299006933,40.0590712584995,45.3796390292022,46.9806655940227,31.8708136435419,26.6478888592474,28.5068256592018,37.7734697658043,34.7819194324038,37.6817257178857,40.4938382322417,10.3255551548033,19.7003825903353,29.3302769413099,23.2489616647487,12.1098320021929,18.0335645535186,16.9508728484454,20.0251897688975,11.9507143018239,82.5142593946768,8.54354403989263,21.4642342681751,14.0747840800981,6.59289599516419,8.06495943554049,10.5237959675,8.15896463970505,7.13752406850656,6.49539876880792,38.1868247206045,20.5618395827738,20.5352661798117,22.1410948684693,20.9088296014469,16.5955548447095,18.071822415566,14.7949685748351,27.4843739083231,11.7949625695532,21.7468759580424,498.868250735508,22.5769984526408,23.4951056449079,25.6675568614143,22.086329814692,31.9327077177571,22.1805181040475,22.2649498083155,20.4475721630136,172.732646390594,266.139725782268,17.0646005139216,28.9897057864935,29.5807556634702,27.0235311793814,22.3783369584352,21.2589049615953,15.385017538556,15.8027794076798,14.1353029927407,11.354814191595,15.9305372516208,11.79240356951,13.4696578296461,13.4408437508804,44.8926159558118,16.6489465030549,14.1747893442972,12.2555769945777,23.1827512838629,16.7037403151552,15.0184331899157,14.7914181564555,17.0534515372024,36.7088697701093,57.5406545633971,33.227939779485,41.4166169448287,63.7126743386697,76.2947836363598,87.077902529903,77.0049257513417,75.6747823003622,78.1818070745248,38.9202553440662,22.7444177838588,20.8294999020044,25.7693120092392,30.3939085810574,33.8272055548026,34.0037493536471,30.4931884713563,30.8082441208143,29.5655737763643,26.8688057883654,30.1802146217722,31.4635465098805,28.427167667762,31.8766852703654,27.1487404031352,32.911148568339,29.3222015104832,32.1427002626579,32.3837624295674,34.9726637433124,36.5600160688235,30.5198323132571,32.5575973256416,30.0208923524905,26.3997576622031,35.3050987644451,35.5144110441088,30.8275338430106,31.4239672128334,29.0655794404227,27.6797595475333,30.6923282377267,32.3817998078669,27.1998321483409,25.9803001055464,25.2646137121041,20.6276211886366,25.632636497225,32.6475300296883,38.0263250417491
|short_description=p1@Arl3
|short_description=p1@Arl3
}}
}}

Latest revision as of 21:24, 25 September 2015

Short description:p1@Arl3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Arl3_5end
Coexpression cluster:MCL_coexpression_mm9:60
Association with transcript: -11bp_to_ENSMUST00000026009, NM_019718, uc008htt.1_5end
EntrezGene:Arl3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Arl3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G721.78
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I52.44
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I65.46
CD326+ enterocyte, pool1.CNhs13542.11848-124I32.42
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I73.69
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I84.21
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E95.68
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E74.79
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F24.21
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E610.79
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F18.85
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E43.94
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E83.32
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A14.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A35.47
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A54.90
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A24.57
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A44.11
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A65.52
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A375.77
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H28.14
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I95.22
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D15.44
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D24.82
GP2+ M cell, pool1.CNhs13228.11845-124H91.72
GP2+ M cell, pool2.CNhs13231.11846-124I12.15
GP2+ M cell, pool3.CNhs13240.11847-124I25.60
Ileum epithelium, pool1.CNhs13199.10252-104B93.42
Ileum epithelium, pool2.CNhs13232.10253-104C13.02
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C83.77
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I36.35
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G612.30
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E931.70
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F53.18
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F65.32
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F74.70
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G810.88
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H17.03
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H310.99
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G918.24
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H216.39
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H418.93
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D88.06
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D98.62
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B318.17
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B759.46
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C292.01
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B855.14
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C359.50
Mouse Astrocytes, donor2.CNhs12078.11552-120C465.79
Mouse Astrocytes, donor3.CNhs12107.11633-122C460.38
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A25.37
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A14.71
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C120.07
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E118.62
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C522.17
Mouse Granule cells, donor1.CNhs12131.11713-123C370.41
Mouse Granule cells, donor2.CNhs12357.11731-123E358.19
Mouse Granule cells, donor3.CNhs12108.11636-122C792.54
Mouse Meningeal cells, donor1.CNhs12132.11716-123C634.56
Mouse Meningeal cells, donor3.CNhs12109.11639-122D151.58
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C722.95
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E725.71
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D230.55
Mouse Microglia, donor1.CNhs12629.11718-123C838.65
Mouse Microglia, donor2.CNhs12634.11736-123E861.47
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D538.88
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F540.50
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D939.12
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F174.55
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D568.03
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D250.83
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F262.11
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D659.75
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D371.58
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3109.56
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7113.67
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D470.30
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F487.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D875.01
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4101.90
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E581.04
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I676.86
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D664.82
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F657.09
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E158.16
Mouse Schwann, donor1.CNhs12507.11728-123D927.72
Mouse Schwann, donor2.CNhs12573.11746-123F928.87
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G314.49
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F77.74
Mouse hepatocyte, donor1.CNhs13078.11714-123C423.12
Mouse hepatocyte, donor3.CNhs12615.11637-122C825.37
Mouse hepatocyte, donor6.CNhs13090.11822-124F414.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F627.78
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A745.93
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I727.44
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E325.46
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I841.69
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G630.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H112.83
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I820.38
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B614.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G124.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G219.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G316.68
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B627.18
accessory axillary lymph node, adult.CNhs10475.1063-29H911.13
adrenal gland, adult.CNhs10508.49-24D727.31
adrenal gland, embryo E14.CNhs11038.406-44C519.26
adrenal gland, embryo E16.CNhs11004.1254-43D615.83
adrenal gland, embryo E17.CNhs11043.1263-45I121.68
adrenal gland, embryo E18.CNhs11026.1262-18F523.66
adrenal gland, neonate N00.CNhs11191.1311-23C115.76
adrenal gland, neonate N25.CNhs11223.1377-27I321.36
amnion, adult pregnant day17.5.CNhs10488.583-22A811.87
aorta, adult.CNhs10498.46-23H144.83
bone (os femoris), adult.CNhs10483.56-12G216.81
bone (os femoris), neonate N02.CNhs11227.1985-43F524.91
bone (os femoris), neonate N16.CNhs11225.1525-43A629.37
bone (os femoris), neonate N20.CNhs11195.1350-25C326.18
cecum, adult.CNhs10467.37-13H416.78
cerebellum, adult.CNhs10494.15-8B266.17
cerebellum, neonate N30.CNhs11135.1395-42I256.97
colon, adult.CNhs10468.36-18H78.43
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C73.95
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D17.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D43.43
corpora quadrigemina, adult.CNhs10501.16-22A468.45
corpus striatum, adult.CNhs10487.19-21D8114.38
corpus striatum, neonate N00.CNhs11226.630-43F133.68
cortex, adult.CNhs10473.12-14D587.26
cortex, neonate N30.CNhs11107.1392-42F283.62
diencephalon, adult.CNhs10482.20-12F281.04
diencephalon, neonate N30.CNhs11201.1388-42B267.17
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B114.97
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A220.78
epididymis, adult.CNhs10490.58-23B242.71
eyeball, adult.CNhs10484.31-12G458.50
eyeball, embryo E12.CNhs11016.345-16C635.65
eyeball, embryo E14.CNhs10521.399-16E232.88
eyeball, embryo E15.CNhs10593.426-16C942.85
eyeball, embryo E17.CNhs11023.1261-18D431.65
eyeball, neonate N00.CNhs11207.633-15C630.55
eyeball, neonate N01.CNhs11140.1532-43E729.72
eyeball, neonate N02.CNhs11205.1551-44G839.17
eyeball, neonate N16.CNhs11188.777-19A2101.67
forelimb, embryo E11.CNhs10596.335-25E231.04
forelimb, embryo E12.CNhs10600.359-14H224.39
forelimb, embryo E13.CNhs10589.384-1E227.45
forelimb, embryo E14.CNhs10577.413-26A819.29
forelimb, embryo E15.CNhs11007.437-20E718.63
forelimb, embryo E17.CNhs10598.1517-43C418.11
forelimb, embryo E18.CNhs11008.1520-43B518.31
gonad, embryo E13.CNhs11044.1564-45I622.29
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C84.92
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D23.09
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D52.56
heart, embryo E11.CNhs10586.331-24E942.05
heart, embryo E12.CNhs11015.353-12F533.77
heart, embryo E13.CNhs11013.376-3I948.98
heart, embryo E14.CNhs10597.403-26D444.27
heart, embryo E15.CNhs11017.431-16C849.78
heart, embryo E16.CNhs11021.457-17C654.92
heart, embryo E17.CNhs11025.479-18E556.04
heart, embryo E18.CNhs11030.1283-20G358.48
heart, neonate N00.CNhs11213.639-21E363.75
heart, neonate N03.CNhs11221.1349-25I241.30
heart, neonate N10.CNhs11118.749-24G139.40
heart, neonate N16.CNhs11209.782-15G150.34
heart, neonate N20.CNhs11127.821-26I649.56
heart, neonate N25.CNhs11196.1351-25D346.54
heart, neonate N30.CNhs11202.1390-42D254.89
hippocampus, adult.CNhs10478.13-16E868.98
hippocampus, neonate N00.CNhs11228.627-43G126.14
intestinal mucosa, adult.CNhs10506.860-29I36.94
intestine, adult.CNhs10496.178-9A35.02
intestine, embryo E12.CNhs11019.1251-16I522.18
intestine, embryo E13.CNhs11010.381-16D519.97
intestine, embryo E15.CNhs10602.976-16D815.85
intestine, embryo E16.CNhs10585.463-22H415.33
intestine, embryo E17.CNhs10582.482-18D312.90
intestine, embryo E18.CNhs10526.1289-20F716.93
intestine, neonate N00.CNhs11126.644-26D16.64
intestine, neonate N01.CNhs11192.1322-23E910.05
intestine, neonate N06.CNhs11102.688-20B810.05
intestine, neonate N07.CNhs11095.720-20F211.14
intestine, neonate N10.CNhs11098.755-23A511.11
intestine, neonate N20.CNhs11187.827-18D16.29
intestine, neonate N25.CNhs11121.1352-25E38.21
intestine, neonate N30.CNhs11131.1384-42G17.37
kidney, embryo E14.CNhs10606.411-4I933.19
kidney, embryo E15.CNhs10997.434-16F826.85
kidney, embryo E16.CNhs10584.464-22A515.78
kidney, embryo E17.CNhs11028.483-18I237.88
kidney, embryo E18.CNhs11001.1288-20C734.72
kidney, neonate N00.CNhs11214.646-21G731.84
kidney, neonate N10.CNhs11206.758-6D536.42
kidney, neonate N20.CNhs11113.832-19I147.38
kidney, neonate N25.CNhs11122.1353-25F346.79
kidney, neonate N30.CNhs11203.1385-42H142.45
liver, adult pregnant day01.CNhs10466.508-5B215.12
liver, embryo E12.CNhs10601.355-15F818.19
liver, embryo E13.CNhs10524.378-3H616.90
liver, embryo E14.CNhs10594.409-16E114.62
liver, embryo E15.CNhs10520.433-16D714.40
liver, embryo E16.CNhs10523.462-17F516.88
liver, embryo E17.CNhs10510.481-18A317.06
liver, embryo E18.CNhs10579.499-43G419.56
liver, neonate N00.CNhs11117.641-24F410.86
liver, neonate N03.CNhs11123.1345-25G215.92
liver, neonate N06.CNhs11101.684-20A815.81
liver, neonate N07.CNhs11103.716-20H212.28
liver, neonate N10.CNhs11115.751-24B914.67
liver, neonate N20.CNhs11220.823-25A316.42
liver, neonate N25.CNhs11198.1368-26H124.94
liver, neonate N30.CNhs11106.1382-42D119.78
lung, adult.CNhs10474.28-22B132.89
lung, embryo E12.CNhs10522.354-16G221.98
lung, embryo E14.CNhs10604.404-26F827.05
lung, embryo E15.CNhs11020.432-17C522.41
lung, embryo E16.CNhs10998.458-17B631.45
lung, embryo E17.CNhs10605.480-44A630.82
lung, embryo E18.CNhs10583.1287-20I633.09
lung, neonate N00.CNhs11224.640-42C621.66
lung, neonate N06.CNhs11212.683-20E522.86
lung, neonate N07.CNhs11111.715-19A321.93
lung, neonate N10.CNhs11219.750-23E619.45
lung, neonate N20.CNhs11109.822-18A427.53
lung, neonate N25.CNhs11119.1359-25C724.69
lung, neonate N30.CNhs11133.1394-42H222.28
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A19.05
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A17.61
mammary gland, adult lactating day02.CNhs10480.595-22B614.75
mammary gland, adult pregnant day19.CNhs10476.588-5H211.59
medulla oblongata, adult.CNhs10477.17-12C281.56
medulla oblongata, neonate N30.CNhs11200.1396-42A369.98
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C740.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C267.16
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E127.13
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E225.38
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E322.62
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D717.92
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D820.05
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D919.53
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D414.57
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D518.70
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D622.14
olfactory brain, adult.CNhs10489.18-22I958.80
ovary, adult.CNhs10507.91-2I719.02
ovary, embryo E18.CNhs11040.505-44H721.19
ovary, neonate N00.CNhs11217.1299-22I414.01
oviduct, adult pregnant day01.CNhs10500.988-6G619.47
pancreas, adult.CNhs10486.34-16E449.12
pancreas, embryo E14.CNhs11012.405-44F427.43
pancreas, embryo E15.CNhs11042.1556-45F228.12
pancreas, embryo E16.CNhs11003.460-26E545.27
pancreas, embryo E17.CNhs10599.1558-45G350.20
pancreas, embryo E18.CNhs10580.1535-43I752.26
pancreas, neonate N00.CNhs11105.645-26G917.83
pancreas, neonate N01.CNhs11138.1531-43D722.54
pancreas, neonate N02.CNhs11139.1539-43D825.67
pancreas, neonate N16.CNhs11136.787-43B645.83
pancreas, neonate N25.CNhs11094.1555-45E240.06
pancreas, neonate N30.CNhs11182.1548-44H545.38
pituitary gland, adult.CNhs10493.21-1G846.98
pituitary gland, embryo E12.CNhs11018.346-16E631.87
pituitary gland, embryo E13.CNhs11009.370-44C726.65
pituitary gland, embryo E14.CNhs11037.398-44A528.51
pituitary gland, embryo E15.CNhs10592.427-16B937.77
pituitary gland, embryo E16.CNhs11036.449-43F634.78
pituitary gland, embryo E17.CNhs11039.1265-44F537.68
pituitary gland, neonate N00.CNhs11190.1308-22E940.49
placenta, adult pregnant day10.CNhs10472.539-13I710.33
placenta, adult pregnant day17.CNhs10464.577-18G319.70
prostate, adult.CNhs10470.859-1F829.33
skin, adult.CNhs10492.30-1C323.25
skin, neonate N00.CNhs11124.650-25G412.11
skin, neonate N03.CNhs11215.662-22H318.03
skin, neonate N06.CNhs11097.693-20I516.95
skin, neonate N10.CNhs11108.762-6C420.03
small intestine, neonate N16.CNhs11114.790-21I111.95
spinal cord, adult.CNhs10505.24-13C982.51
spleen, adult.CNhs10465.25-2G28.54
spleen, embryo E16.CNhs11035.461-43C121.46
spleen, embryo E18.CNhs11011.1271-21F214.07
spleen, neonate N10.CNhs11116.752-24D16.59
spleen, neonate N20.CNhs11112.824-19H18.06
spleen, neonate N25.CNhs11099.1354-25G310.52
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C68.16
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C97.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D36.50
stomach, adult.CNhs10503.33-1H638.19
stomach, embryo E12.CNhs10588.356-43E320.56
stomach, embryo E15.CNhs10603.1252-16G820.54
stomach, embryo E16.CNhs11022.459-17D422.14
stomach, embryo E17.CNhs11006.1035-18D520.91
stomach, embryo E18.CNhs10999.1286-20C616.60
stomach, neonate N03.CNhs11193.1340-24B818.07
stomach, neonate N07.CNhs11210.718-18A914.79
stomach, neonate N25.CNhs11104.1355-25E427.48
stomach, neonate N30.CNhs11134.1386-42I111.79
submandibular gland, adult.CNhs10469.59-29C121.75
testis, adult.CNhs10504.57-7G5498.87
testis, embryo E13.CNhs11031.389-23F522.58
testis, embryo E15.CNhs11034.443-27C523.50
testis, embryo E16.CNhs11033.470-26G525.67
testis, embryo E17.CNhs11029.486-18I522.09
testis, embryo E18.CNhs11027.503-18G531.93
testis, neonate N00.CNhs11189.1300-22B722.18
testis, neonate N07.CNhs11222.726-26I422.26
testis, neonate N10.CNhs11204.763-44D920.45
testis, neonate N20.CNhs11110.839-18H3172.73
testis, neonate N30.CNhs11130.1391-42E2266.14
thymus, adult.CNhs10471.38-12B517.06
thymus, embryo E14.CNhs11041.402-44I428.99
thymus, embryo E15.CNhs11005.430-45I229.58
thymus, embryo E16.CNhs11002.456-26C527.02
thymus, embryo E17.CNhs10581.478-18C122.38
thymus, embryo E18.CNhs10595.1273-19G421.26
thymus, neonate N02.CNhs11181.1541-43F815.39
thymus, neonate N03.CNhs11137.2104-43C715.80
thymus, neonate N06.CNhs11197.681-26C414.14
thymus, neonate N07.CNhs11211.713-19D311.35
thymus, neonate N10.CNhs11194.748-24E415.93
thymus, neonate N20.CNhs11186.820-7A211.79
thymus, neonate N25.CNhs11125.1362-25G713.47
thymus, neonate N30.CNhs11132.1393-42G213.44
tongue, adult.CNhs10499.32-1B444.89
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H316.65
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F714.17
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G512.26
urinary bladder, adult.CNhs10481.879-12E423.18
uterus, adult pregnant day19.CNhs10497.590-15F516.70
uterus, adult.CNhs10509.92-27E515.02
vagina, adult.CNhs10502.89-27D514.79
vesicular gland, adult.CNhs10491.51-27F817.05
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A136.71
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A257.54
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A333.23
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D741.42
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A463.71
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A576.29
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A687.08
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A777.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A875.67
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A978.18
whole body, embryo E11.CNhs11014.324-5I838.92
whole body, embryo E12.CNhs10587.857-27C922.74
whole body, embryo E13.CNhs10512.372-23H220.83
whole body, embryo E14.5.CNhs10578.420-27D225.77
whole body, embryo E14.CNhs10519.395-14B130.39
whole body, embryo E16.CNhs10514.453-14F233.83
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G534.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G530.49
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G530.81
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G529.57
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G526.87
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G530.18
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G531.46
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G528.43
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G531.88
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G527.15
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G532.91
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G529.32
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G532.14
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G532.38
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G534.97
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G536.56
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G530.52
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G532.56
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G530.02
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G526.40
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G535.31
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G535.51
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G530.83
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G531.42
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G529.07
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G527.68
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G530.69
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G532.38
whole body, embryo E17.5.CNhs10513.490-9F927.20
whole body, embryo E17.CNhs10517.475-3I525.98
whole body, embryo E18.CNhs10516.493-3B325.26
whole body, neonate N00.CNhs10525.657-19C220.63
whole body, neonate N01.CNhs10576.659-23C625.63
whole body, neonate N06.CNhs10515.692-21D132.65
whole body, neonate N10.CNhs10518.761-6B438.03





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.00e-1223
neuroblast (sensu Vertebrata)2.00e-1223
ectodermal cell2.96e-1144
neurectodermal cell2.96e-1144
neural cell3.02e-1143
neuron5.04e-0833
neuronal stem cell5.04e-0833
neuroblast5.04e-0833
electrically signaling cell5.04e-0833

Uber anatomy
Ontology termp-valuen
structure with developmental contribution from neural crest9.70e-2692
central nervous system5.90e-2473
nervous system7.20e-2475
regional part of nervous system1.26e-2354
neurectoderm1.47e-2364
neural plate1.47e-2364
presumptive neural plate1.47e-2364
neural tube3.18e-2252
neural rod3.18e-2252
future spinal cord3.18e-2252
neural keel3.18e-2252
ectoderm-derived structure4.20e-2295
ectoderm4.20e-2295
presumptive ectoderm4.20e-2295
brain2.07e-1947
future brain2.07e-1947
ecto-epithelium3.96e-1973
regional part of brain6.28e-1946
pre-chordal neural plate1.50e-1749
gray matter1.07e-1534
anterior neural tube1.25e-1540
regional part of forebrain4.30e-1539
forebrain4.30e-1539
future forebrain4.30e-1539
tube1.73e-13114
brain grey matter2.99e-1329
regional part of telencephalon2.99e-1329
telencephalon2.99e-1329
anatomical conduit5.18e-13122
cerebral cortex5.46e-0921
cerebral hemisphere5.46e-0921
pallium5.46e-0921
regional part of cerebral cortex8.84e-0817
posterior neural tube2.36e-0712
chordal neural plate2.36e-0712
compound organ7.56e-0743
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