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FFCP PHASE1:Mm9::chr19:46576154..46576165,+: Difference between revisions

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{{FFCP|EntrezGene=93679|HGNC=|UniProt=Q99PJ2|association_with_transcript=16bp_to_ENSMUST00000026008,NM_053100,uc008hts.1_5end|description=CAGE_peak_6_at_Trim8_5end|id=chr19:46576154..46576165,+|ontology_enrichment_celltype=CL:0000055!5.90e-11!50;CL:0000117!5.99e-11!23;CL:0000337!5.99e-11!23;CL:0000221!5.21e-10!44;CL:0000133!5.21e-10!44;CL:0000393!1.10e-09!39;CL:0000211!1.10e-09!39;CL:0002319!1.19e-09!43;CL:0000540!2.10e-08!33;CL:0000047!2.10e-08!33;CL:0000031!2.10e-08!33;CL:0000404!2.10e-08!33;CL:0002321!6.49e-07!70;CL:0000220!6.49e-07!70|ontology_enrichment_celltype_v019_2=CL:0000117,2.05e-15,23;CL:0000337,2.05e-15,23;CL:0000221,1.18e-13,44;CL:0000133,1.18e-13,44;CL:0002319,3.72e-13,43;CL:0000393,3.40e-12,39;CL:0000211,3.40e-12,39;CL:0000540,7.63e-11,33;CL:0000047,7.63e-11,33;CL:0000031,7.63e-11,33;CL:0000404,7.63e-11,33;CL:0002321,2.88e-10,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!6.09e-11!75;UBERON:0001016!6.09e-11!75;UBERON:0004121!2.85e-10!102;UBERON:0000924!2.85e-10!102;UBERON:0006601!2.85e-10!102;UBERON:0001017!6.48e-10!73;UBERON:0005743!6.48e-10!73;UBERON:0002346!4.40e-09!71;UBERON:0003075!4.40e-09!71;UBERON:0007284!4.40e-09!71;UBERON:0001049!2.10e-08!52;UBERON:0005068!2.10e-08!52;UBERON:0006241!2.10e-08!52;UBERON:0007135!2.10e-08!52;UBERON:0000033!5.54e-08!63;UBERON:0000025!1.83e-07!114;UBERON:0000955!3.44e-07!50;UBERON:0006238!3.44e-07!50;UBERON:0003056!3.65e-07!49;UBERON:0002616!4.11e-07!49;UBERON:0002020!4.35e-07!34;UBERON:0004111!8.75e-07!122|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.72e-14,75;UBERON:0000073,8.20e-14,54;UBERON:0004121,5.54e-13,95;UBERON:0000924,5.54e-13,95;UBERON:0006601,5.54e-13,95;UBERON:0001017,7.06e-13,73;UBERON:0002346,1.81e-12,64;UBERON:0003075,1.81e-12,64;UBERON:0007284,1.81e-12,64;UBERON:0001049,5.62e-12,52;UBERON:0005068,5.62e-12,52;UBERON:0006241,5.62e-12,52;UBERON:0007135,5.62e-12,52;UBERON:0010314,4.35e-11,92;UBERON:0010371,1.13e-10,73;UBERON:0002020,2.73e-10,34;UBERON:0003056,1.11e-09,49;UBERON:0002616,4.82e-09,46;UBERON:0003080,1.06e-08,40;UBERON:0000955,1.23e-08,47;UBERON:0006238,1.23e-08,47;UBERON:0002780,1.60e-08,39;UBERON:0001890,1.60e-08,39;UBERON:0006240,1.60e-08,39;UBERON:0000025,1.79e-08,114;UBERON:0004111,7.03e-08,122;UBERON:0003528,8.19e-07,29;UBERON:0002791,8.19e-07,29;UBERON:0001893,8.19e-07,29|phase1_expression=1.60148847104794,0.697950815278722,0,0.90739263392049,0.500895729946347,0.16787927191189,0.467225281191051,0.645616617207881,1.12630977721333,0.234064526321993,0.171217968225505,0,0.342401459862411,0.699363219351979,0,0.404950534779652,0,0.473193248037357,0.411343300817216,0,1.02051948181284,0.794327609607082,0.261199789138935,0.159992422793407,0.45881856213434,0.57423196411502,0.86152399231815,0.430942465371778,0.950117097281869,0.756090389279792,0.221730510655305,0,1.23012957516914,0,0.288851619751275,0.166234645358492,0.408338712524738,0,0,0,1.17646297606203,0.683045484958446,0,1.38486499773135,1.52065396829272,0.734187008646726,0,1.09012578190223,1.75748946187577,1.36100929351998,0.839918529752175,0,0,0.725362142011344,0.336093799142464,1.80081605225163,1.43266719969378,1.03134418455488,1.82084814773638,5.81890077199236,1.26766280701236,1.0165335962074,0.889294796111139,3.5995988691256,1.97773272513395,2.8419204597844,3.89480143673926,2.30530983192933,2.90330914463737,2.70011876663381,2.52389953621658,3.71346279724945,3.09215957332259,1.34739879136449,3.92966431174769,0,2.20231761998777,1.27687338085188,1.38245879930619,2.90149833006426,3.38504281328916,3.12548022334056,1.95428099300967,2.8138130501584,1.22238598221448,3.24091444021034,3.84403538157578,3.16879057903011,4.39211921332468,3.24957708459178,2.02905142091174,0.860423876981386,1.3599426674155,0.539703191637817,0,0,0.140444420131752,0.340860645156116,1.81850203222008,1.41335829804136,1.54927761754349,1.28326477414318,0,0,1.94841936910093,0.760079596425296,1.01104889002957,0.22836775943812,0,0.148442139064825,2.08182392119363,0.304465478312141,1.38369298353635,0.301445281105245,0.940709657085638,1.0053327306374,1.23597483867187,0.144599356919912,0,0.161766849947409,0.220841518460394,1.45462575940567,0,1.46390398505774,1.46612694769419,0.510914110417183,0,0,0.508280908292259,1.04853447583376,0,2.51308704225729,0.347648640384553,2.04572365864264,1.0389402227978,0.973447578406546,1.32391173005411,0.497627882440372,0.252722758433675,0.420883711772948,1.17108398666433,0.229902104433473,0.720248519221397,1.05493372485001,2.04109497453984,2.562274405697,2.24884138943349,1.03481348295606,1.5089759505299,0.756424320671277,0.527853372491847,0.876782929710299,1.11218899690239,0.348252166522167,0.411564272815887,1.79130840136644,0,0,0.284163499395593,0.621377317606506,2.11073453982987,0.720248245844059,0.473489471170421,0.590292695242212,0.771335564436891,0.465067889500816,1.07309360559848,0.934122738937356,0.493679549740441,0.820837320395476,0.486412857275134,0.877199924551994,1.53685080703735,1.07365135008297,0.84115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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=93679
|HGNC=
|TSSclassifier=NA
|UniProt=Q99PJ2
|association_with_transcript=16bp_to_ENSMUST00000026008,NM_053100,uc008hts.1_5end
|cluster_id=chr19:46576154..46576165,+
|description=CAGE_peak_6_at_Trim8_5end
|id=chr19:46576154..46576165,+
|ontology_enrichment_celltype=CL:0000055!5.90e-11!50;CL:0000117!5.99e-11!23;CL:0000337!5.99e-11!23;CL:0000221!5.21e-10!44;CL:0000133!5.21e-10!44;CL:0000393!1.10e-09!39;CL:0000211!1.10e-09!39;CL:0002319!1.19e-09!43;CL:0000540!2.10e-08!33;CL:0000047!2.10e-08!33;CL:0000031!2.10e-08!33;CL:0000404!2.10e-08!33;CL:0002321!6.49e-07!70;CL:0000220!6.49e-07!70
|ontology_enrichment_celltype_v019_2=CL:0000117,2.05e-15,23;CL:0000337,2.05e-15,23;CL:0000221,1.18e-13,44;CL:0000133,1.18e-13,44;CL:0002319,3.72e-13,43;CL:0000393,3.40e-12,39;CL:0000211,3.40e-12,39;CL:0000540,7.63e-11,33;CL:0000047,7.63e-11,33;CL:0000031,7.63e-11,33;CL:0000404,7.63e-11,33;CL:0002321,2.88e-10,70
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!6.09e-11!75;UBERON:0001016!6.09e-11!75;UBERON:0004121!2.85e-10!102;UBERON:0000924!2.85e-10!102;UBERON:0006601!2.85e-10!102;UBERON:0001017!6.48e-10!73;UBERON:0005743!6.48e-10!73;UBERON:0002346!4.40e-09!71;UBERON:0003075!4.40e-09!71;UBERON:0007284!4.40e-09!71;UBERON:0001049!2.10e-08!52;UBERON:0005068!2.10e-08!52;UBERON:0006241!2.10e-08!52;UBERON:0007135!2.10e-08!52;UBERON:0000033!5.54e-08!63;UBERON:0000025!1.83e-07!114;UBERON:0000955!3.44e-07!50;UBERON:0006238!3.44e-07!50;UBERON:0003056!3.65e-07!49;UBERON:0002616!4.11e-07!49;UBERON:0002020!4.35e-07!34;UBERON:0004111!8.75e-07!122
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.72e-14,75;UBERON:0000073,8.20e-14,54;UBERON:0004121,5.54e-13,95;UBERON:0000924,5.54e-13,95;UBERON:0006601,5.54e-13,95;UBERON:0001017,7.06e-13,73;UBERON:0002346,1.81e-12,64;UBERON:0003075,1.81e-12,64;UBERON:0007284,1.81e-12,64;UBERON:0001049,5.62e-12,52;UBERON:0005068,5.62e-12,52;UBERON:0006241,5.62e-12,52;UBERON:0007135,5.62e-12,52;UBERON:0010314,4.35e-11,92;UBERON:0010371,1.13e-10,73;UBERON:0002020,2.73e-10,34;UBERON:0003056,1.11e-09,49;UBERON:0002616,4.82e-09,46;UBERON:0003080,1.06e-08,40;UBERON:0000955,1.23e-08,47;UBERON:0006238,1.23e-08,47;UBERON:0002780,1.60e-08,39;UBERON:0001890,1.60e-08,39;UBERON:0006240,1.60e-08,39;UBERON:0000025,1.79e-08,114;UBERON:0004111,7.03e-08,122;UBERON:0003528,8.19e-07,29;UBERON:0002791,8.19e-07,29;UBERON:0001893,8.19e-07,29
|phase1_expression=1.60148847104794,0.697950815278722,0,0.90739263392049,0.500895729946347,0.16787927191189,0.467225281191051,0.645616617207881,1.12630977721333,0.234064526321993,0.171217968225505,0,0.342401459862411,0.699363219351979,0,0.404950534779652,0,0.473193248037357,0.411343300817216,0,1.02051948181284,0.794327609607082,0.261199789138935,0.159992422793407,0.45881856213434,0.57423196411502,0.86152399231815,0.430942465371778,0.950117097281869,0.756090389279792,0.221730510655305,0,1.23012957516914,0,0.288851619751275,0.166234645358492,0.408338712524738,0,0,0,1.17646297606203,0.683045484958446,0,1.38486499773135,1.52065396829272,0.734187008646726,0,1.09012578190223,1.75748946187577,1.36100929351998,0.839918529752175,0,0,0.725362142011344,0.336093799142464,1.80081605225163,1.43266719969378,1.03134418455488,1.82084814773638,5.81890077199236,1.26766280701236,1.0165335962074,0.889294796111139,3.5995988691256,1.97773272513395,2.8419204597844,3.89480143673926,2.30530983192933,2.90330914463737,2.70011876663381,2.52389953621658,3.71346279724945,3.09215957332259,1.34739879136449,3.92966431174769,0,2.20231761998777,1.27687338085188,1.38245879930619,2.90149833006426,3.38504281328916,3.12548022334056,1.95428099300967,2.8138130501584,1.22238598221448,3.24091444021034,3.84403538157578,3.16879057903011,4.39211921332468,3.24957708459178,2.02905142091174,0.860423876981386,1.3599426674155,0.539703191637817,0,0,0.140444420131752,0.340860645156116,1.81850203222008,1.41335829804136,1.54927761754349,1.28326477414318,0,0,1.94841936910093,0.760079596425296,1.01104889002957,0.22836775943812,0,0.148442139064825,2.08182392119363,0.304465478312141,1.38369298353635,0.301445281105245,0.940709657085638,1.0053327306374,1.23597483867187,0.144599356919912,0,0.161766849947409,0.220841518460394,1.45462575940567,0,1.46390398505774,1.46612694769419,0.510914110417183,0,0,0.508280908292259,1.04853447583376,0,2.51308704225729,0.347648640384553,2.04572365864264,1.0389402227978,0.973447578406546,1.32391173005411,0.497627882440372,0.252722758433675,0.420883711772948,1.17108398666433,0.229902104433473,0.720248519221397,1.05493372485001,2.04109497453984,2.562274405697,2.24884138943349,1.03481348295606,1.5089759505299,0.756424320671277,0.527853372491847,0.876782929710299,1.11218899690239,0.348252166522167,0.411564272815887,1.79130840136644,0,0,0.284163499395593,0.621377317606506,2.11073453982987,0.720248245844059,0.473489471170421,0.590292695242212,0.771335564436891,0.465067889500816,1.07309360559848,0.934122738937356,0.493679549740441,0.820837320395476,0.486412857275134,0.877199924551994,1.53685080703735,1.07365135008297,0.841159794256509,2.6755199218614,0,0.528901133327089,0.639864751605702,0.928946687441754,0.38660238396628,0.201683524623343,0.22237804384487,0,0.474529061544512,0.823494773620054,1.00534083520108,0.994782360205754,0.974820435595601,0,0.432276099749388,1.1948476395262,0.189667900953082,0.913988100877831,0,1.4255592949172,1.55161989734101,1.8936671370386,0.948548056863859,0.590440591918409,1.09899109488962,1.1105744752962,0.296452627087149,0.333690211432188,0,0.224862112384854,0.202860121388503,0.72353147925725,0,0.863088412352432,1.29708181420028,0.823684239564244,2.87536413054709,0.744281895337007,0.312037673114561,0.505157755894224,0.358794827043824,0,0.739012760666419,0.189491411770485,0.651859905768103,1.01847051465113,0.234690248288502,2.01007508930179,0.714130922658041,2.14647012643579,1.26108115284953,2.21464689648775,1.91345722388985,1.47476983244164,2.24490476425664,3.03763023021174,4.52373851817817,2.17562273527484,0.491764273019036,0.827810238914197,0.321101179975584,1.05490517932983,1.14754461763673,1.26235463602186,1.26203287766503,0.780877488593277,0.861693590931196,0.238968797952552,0.222798674082394,0.566153061577665,1.21443210502468,0.876767573733936,0,0.963963949265421,0.709700426041343,0.712262414669021,1.30309567482861,0.824850614862677,0,0.485561272309963,0.604647113929502,0.565815239267694,0.295301892880773,0.614870295887855,0.516856586336442,0.727067458955011,1.42598951353889,0,1.05418608574999,1.03135543248187,0.340439605753788,1.44048875225048,2.32845630808958,3.21505552547388,0.354680467284547,1.96205699362278,1.15184314421485,2.43571959291679,0,0.847328283455281,0.220528398054962,0,0.807322133479528,0.965006798850494,0.358117032009409,0.328281799490123,0.582961673259701,0.556275906031529,0.683483523191411,1.03193433981611,0.370389054739423,0.941842285023455,0.546776910884101,0.686334519619568,0,0.69975726161829,0.138199973804424,0.954670618015114,0.632671987162271,0,0.216010681643603,0.836353184057875,0.436725127492355,0.944050424693745,1.07449492442937,0.785267825952089,0.648074866458964,0.621339313086926,0,0.897099276263873,0.992750942742586,2.52786544847262,1.54991788173277,1.520605129417,2.58185925020659,1.0416350787516,0.209718688851422,0.483168241652012,0,0,0,0.410843828659309,0.51968329191118,0.716106782669926,0.198681354781265,0.240390899039938,0.443068581523732,0.201932899896295,0.457240839929999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|short_description=p6@Trim8
}}

Latest revision as of 21:20, 25 September 2015

Short description:p6@Trim8
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_6_at_Trim8_5end
Coexpression cluster:NA
Association with transcript: 16bp_to_ENSMUST00000026008, NM_053100, uc008hts.1_5end
EntrezGene:Trim8
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p6@Trim8

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.60
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.91
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.65
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.34
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.70
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.47
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.41
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.02
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.79
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I20.43
Ileum epithelium, pool1.CNhs13199.10252-104B90.95
Ileum epithelium, pool2.CNhs13232.10253-104C10.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.52
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.73
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.09
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.76
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.36
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.84
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.80
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.43
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C31.82
Mouse Granule cells, donor2.CNhs12357.11731-123E35.82
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C73.60
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.84
Mouse Microglia, donor1.CNhs12629.11718-123C83.89
Mouse Microglia, donor2.CNhs12634.11736-123E82.31
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.90
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.70
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.52
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.09
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.35
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.93
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.28
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.38
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.90
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.39
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.13
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.95
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.81
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.22
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.24
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.84
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13.17
Mouse Schwann, donor1.CNhs12507.11728-123D94.39
Mouse Schwann, donor2.CNhs12573.11746-123F93.25
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.03
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C41.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.82
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.41
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.55
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.95
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.76
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C52.08
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I11.38
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.94
adrenal gland, neonate N25.CNhs11223.1377-27I31.01
amnion, adult pregnant day17.5.CNhs10488.583-22A81.24
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.46
cerebellum, neonate N30.CNhs11135.1395-42I21.47
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.51
corpora quadrigemina, adult.CNhs10501.16-22A41.05
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F12.51
cortex, adult.CNhs10473.12-14D50.35
cortex, neonate N30.CNhs11107.1392-42F22.05
diencephalon, adult.CNhs10482.20-12F21.04
diencephalon, neonate N30.CNhs11201.1388-42B20.97
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.32
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.50
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C61.17
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D41.05
eyeball, neonate N00.CNhs11207.633-15C62.04
eyeball, neonate N01.CNhs11140.1532-43E72.56
eyeball, neonate N02.CNhs11205.1551-44G82.25
eyeball, neonate N16.CNhs11188.777-19A21.03
forelimb, embryo E11.CNhs10596.335-25E21.51
forelimb, embryo E12.CNhs10600.359-14H20.76
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A80.88
forelimb, embryo E15.CNhs11007.437-20E71.11
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I61.79
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F52.11
heart, embryo E13.CNhs11013.376-3I90.72
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C60.77
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G31.07
heart, neonate N00.CNhs11213.639-21E30.93
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G10.82
heart, neonate N16.CNhs11209.782-15G10.49
heart, neonate N20.CNhs11127.821-26I60.88
heart, neonate N25.CNhs11196.1351-25D31.54
heart, neonate N30.CNhs11202.1390-42D21.07
hippocampus, adult.CNhs10478.13-16E80.84
hippocampus, neonate N00.CNhs11228.627-43G12.68
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D50.93
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.82
intestine, neonate N06.CNhs11102.688-20B81.01
intestine, neonate N07.CNhs11095.720-20F20.99
intestine, neonate N10.CNhs11098.755-23A50.97
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G11.19
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.91
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I21.43
kidney, embryo E18.CNhs11001.1288-20C71.55
kidney, neonate N00.CNhs11214.646-21G71.89
kidney, neonate N10.CNhs11206.758-6D50.95
kidney, neonate N20.CNhs11113.832-19I10.59
kidney, neonate N25.CNhs11122.1353-25F31.10
kidney, neonate N30.CNhs11203.1385-42H11.11
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.72
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.86
liver, neonate N00.CNhs11117.641-24F41.30
liver, neonate N03.CNhs11123.1345-25G20.82
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.74
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.65
lung, embryo E15.CNhs11020.432-17C51.02
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A62.01
lung, embryo E18.CNhs10583.1287-20I60.71
lung, neonate N00.CNhs11224.640-42C62.15
lung, neonate N06.CNhs11212.683-20E51.26
lung, neonate N07.CNhs11111.715-19A32.21
lung, neonate N10.CNhs11219.750-23E61.91
lung, neonate N20.CNhs11109.822-18A41.47
lung, neonate N25.CNhs11119.1359-25C72.24
lung, neonate N30.CNhs11133.1394-42H23.04
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A14.52
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A12.18
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C20.32
medulla oblongata, neonate N30.CNhs11200.1396-42A31.05
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.15
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.26
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.86
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.21
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I70.71
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I41.30
oviduct, adult pregnant day01.CNhs10500.988-6G60.82
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D81.43
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E61.44
pituitary gland, embryo E13.CNhs11009.370-44C72.33
pituitary gland, embryo E14.CNhs11037.398-44A53.22
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F61.96
pituitary gland, embryo E17.CNhs11039.1265-44F51.15
pituitary gland, neonate N00.CNhs11190.1308-22E92.44
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.85
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.81
skin, neonate N03.CNhs11215.662-22H30.97
skin, neonate N06.CNhs11097.693-20I50.36
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C90.56
spleen, adult.CNhs10465.25-2G20.68
spleen, embryo E16.CNhs11035.461-43C11.03
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.94
spleen, neonate N20.CNhs11112.824-19H10.55
spleen, neonate N25.CNhs11099.1354-25G30.69
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.70
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.63
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.84
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.94
stomach, neonate N07.CNhs11210.718-18A91.07
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I10.65
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.90
testis, embryo E15.CNhs11034.443-27C50.99
testis, embryo E16.CNhs11033.470-26G52.53
testis, embryo E17.CNhs11029.486-18I51.55
testis, embryo E18.CNhs11027.503-18G51.52
testis, neonate N00.CNhs11189.1300-22B72.58
testis, neonate N07.CNhs11222.726-26I41.04
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.41
thymus, embryo E16.CNhs11002.456-26C50.52
thymus, embryo E17.CNhs10581.478-18C10.72
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.44
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.46
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.29
thymus, neonate N25.CNhs11125.1362-25G70.77
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F72.06
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F50.56
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.41
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I80.62
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.15
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.05e-1523
neuroblast (sensu Vertebrata)2.05e-1523
ectodermal cell1.18e-1344
neurectodermal cell1.18e-1344
neural cell3.72e-1343
electrically responsive cell3.40e-1239
electrically active cell3.40e-1239
neuron7.63e-1133
neuronal stem cell7.63e-1133
neuroblast7.63e-1133
electrically signaling cell7.63e-1133
embryonic cell2.88e-1070

Uber anatomy
Ontology termp-valuen
nervous system2.72e-1475
regional part of nervous system8.20e-1454
ectoderm-derived structure5.54e-1395
ectoderm5.54e-1395
presumptive ectoderm5.54e-1395
central nervous system7.06e-1373
neurectoderm1.81e-1264
neural plate1.81e-1264
presumptive neural plate1.81e-1264
neural tube5.62e-1252
neural rod5.62e-1252
future spinal cord5.62e-1252
neural keel5.62e-1252
structure with developmental contribution from neural crest4.35e-1192
ecto-epithelium1.13e-1073
gray matter2.73e-1034
pre-chordal neural plate1.11e-0949
regional part of brain4.82e-0946
anterior neural tube1.06e-0840
brain1.23e-0847
future brain1.23e-0847
regional part of forebrain1.60e-0839
forebrain1.60e-0839
future forebrain1.60e-0839
tube1.79e-08114
anatomical conduit7.03e-08122
brain grey matter8.19e-0729
regional part of telencephalon8.19e-0729
telencephalon8.19e-0729
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