FFCP PHASE1:Mm9::chr10:20672403..20672489,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=52906 | |EntrezGene=52906 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q8K3E5 | |UniProt=Q8K3E5 | ||
|association_with_transcript=0bp_to_ENSMUST00000095801_5end | |association_with_transcript=0bp_to_ENSMUST00000095801_5end | ||
|cluster_id=chr10:20672403..20672489,+ | |||
|description=CAGE_peak_1_at_Ahi1_5end | |description=CAGE_peak_1_at_Ahi1_5end | ||
|id=chr10:20672403..20672489,+ | |id=chr10:20672403..20672489,+ | ||
|ontology_enrichment_celltype=CL:0000540!1.88e-15!33;CL:0000047!1.88e-15!33;CL:0000031!1.88e-15!33;CL:0000404!1.88e-15!33;CL:0000393!4.23e-13!39;CL:0000211!4.23e-13!39;CL:0000117!6.43e-13!23;CL:0000337!6.43e-13!23;CL:0000221!6.74e-10!44;CL:0000133!6.74e-10!44;CL:0002319!7.88e-10!43;CL:0000055!6.24e-08!50 | |ontology_enrichment_celltype=CL:0000540!1.88e-15!33;CL:0000047!1.88e-15!33;CL:0000031!1.88e-15!33;CL:0000404!1.88e-15!33;CL:0000393!4.23e-13!39;CL:0000211!4.23e-13!39;CL:0000117!6.43e-13!23;CL:0000337!6.43e-13!23;CL:0000221!6.74e-10!44;CL:0000133!6.74e-10!44;CL:0002319!7.88e-10!43;CL:0000055!6.24e-08!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.87e-15,33;CL:0000047,1.87e-15,33;CL:0000031,1.87e-15,33;CL:0000404,1.87e-15,33;CL:0000393,4.23e-13,39;CL:0000211,4.23e-13,39;CL:0000117,6.42e-13,23;CL:0000337,6.42e-13,23;CL:0000221,6.73e-10,44;CL:0000133,6.73e-10,44;CL:0002319,7.87e-10,43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.99e-26!73;UBERON:0005743!2.99e-26!73;UBERON:0002346!7.07e-26!71;UBERON:0003075!7.07e-26!71;UBERON:0007284!7.07e-26!71;UBERON:0000073!8.34e-26!75;UBERON:0001016!8.34e-26!75;UBERON:0004121!6.29e-24!102;UBERON:0000924!6.29e-24!102;UBERON:0006601!6.29e-24!102;UBERON:0000033!1.93e-21!63;UBERON:0001049!2.33e-21!52;UBERON:0005068!2.33e-21!52;UBERON:0006241!2.33e-21!52;UBERON:0007135!2.33e-21!52;UBERON:0000955!2.05e-20!50;UBERON:0006238!2.05e-20!50;UBERON:0002616!8.59e-20!49;UBERON:0003056!9.49e-20!49;UBERON:0007811!3.94e-18!86;UBERON:0000153!1.08e-17!94;UBERON:0003080!1.88e-17!40;UBERON:0002020!6.99e-17!34;UBERON:0002780!9.73e-17!39;UBERON:0001890!9.73e-17!39;UBERON:0006240!9.73e-17!39;UBERON:0002791!6.72e-14!29;UBERON:0003528!6.72e-14!29;UBERON:0001893!6.72e-14!29;UBERON:0000956!1.92e-09!21;UBERON:0001869!1.92e-09!21;UBERON:0000203!1.92e-09!21;UBERON:0002619!5.60e-08!17;UBERON:0002021!1.96e-07!10;UBERON:0000411!1.96e-07!10;UBERON:0001950!1.96e-07!10 | |ontology_enrichment_uberon=UBERON:0001017!2.99e-26!73;UBERON:0005743!2.99e-26!73;UBERON:0002346!7.07e-26!71;UBERON:0003075!7.07e-26!71;UBERON:0007284!7.07e-26!71;UBERON:0000073!8.34e-26!75;UBERON:0001016!8.34e-26!75;UBERON:0004121!6.29e-24!102;UBERON:0000924!6.29e-24!102;UBERON:0006601!6.29e-24!102;UBERON:0000033!1.93e-21!63;UBERON:0001049!2.33e-21!52;UBERON:0005068!2.33e-21!52;UBERON:0006241!2.33e-21!52;UBERON:0007135!2.33e-21!52;UBERON:0000955!2.05e-20!50;UBERON:0006238!2.05e-20!50;UBERON:0002616!8.59e-20!49;UBERON:0003056!9.49e-20!49;UBERON:0007811!3.94e-18!86;UBERON:0000153!1.08e-17!94;UBERON:0003080!1.88e-17!40;UBERON:0002020!6.99e-17!34;UBERON:0002780!9.73e-17!39;UBERON:0001890!9.73e-17!39;UBERON:0006240!9.73e-17!39;UBERON:0002791!6.72e-14!29;UBERON:0003528!6.72e-14!29;UBERON:0001893!6.72e-14!29;UBERON:0000956!1.92e-09!21;UBERON:0001869!1.92e-09!21;UBERON:0000203!1.92e-09!21;UBERON:0002619!5.60e-08!17;UBERON:0002021!1.96e-07!10;UBERON:0000411!1.96e-07!10;UBERON:0001950!1.96e-07!10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.98e-26,73;UBERON:0001016,8.30e-26,75;UBERON:0002346,3.98e-25,64;UBERON:0003075,3.98e-25,64;UBERON:0007284,3.98e-25,64;UBERON:0000073,5.96e-23,54;UBERON:0004121,1.05e-22,95;UBERON:0000924,1.05e-22,95;UBERON:0006601,1.05e-22,95;UBERON:0001049,2.32e-21,52;UBERON:0005068,2.32e-21,52;UBERON:0006241,2.32e-21,52;UBERON:0007135,2.32e-21,52;UBERON:0010371,5.39e-21,73;UBERON:0003056,9.46e-20,49;UBERON:0000955,2.61e-18,47;UBERON:0006238,2.61e-18,47;UBERON:0002616,1.06e-17,46;UBERON:0003080,1.88e-17,40;UBERON:0002020,6.97e-17,34;UBERON:0002780,9.70e-17,39;UBERON:0001890,9.70e-17,39;UBERON:0006240,9.70e-17,39;UBERON:0010314,1.53e-14,92;UBERON:0003528,6.70e-14,29;UBERON:0002791,6.70e-14,29;UBERON:0001893,6.70e-14,29;UBERON:0000956,1.91e-09,21;UBERON:0001869,1.91e-09,21;UBERON:0000203,1.91e-09,21;UBERON:0002619,5.60e-08,17;UBERON:0002021,1.95e-07,10;UBERON:0000411,1.95e-07,10;UBERON:0001950,1.95e-07,10 | |||
|phase1_expression=29.3072390201773,1.04692622291808,0.909998478779072,0.60492842261366,2.50447864973174,2.35030980676646,2.33612640595526,20.2723617803275,39.8432083689217,52.4304538961265,35.4421194226795,28.3988886023398,5.82082481766099,9.26656265641372,17.9879271380458,23.0821804824402,28.682037003254,10.0947892914636,7.81552271552711,7.63901373236454,114.46826854334,4.0709289992363,2.35079810225042,0.95995453676044,0.45881856213434,0.57423196411502,0.430761996159075,0.215471232685889,0.760093677825496,0,0.221730510655305,14.6057054895715,10.4561013889377,0,1.1554064790051,0.498703936075477,0.408338712524738,12.1374172913703,8.5946887897618,8.89990364755457,38.8232782100469,10.9287277593351,13.1087795318411,23.1650145075062,24.634594286342,26.4307323112821,3.12956537739216,8.93903141159831,7.0299578475031,14.387812531497,13.4386964760348,7.18762821824858,13.4226084846189,12.3311564141929,19.8295341494054,9.77585856936598,8.02293631828519,5.67239301505187,127.459370341547,192.55271645502,150.218042630964,3.04960078862219,4.4464739805557,1.7997994345628,0,1.4209602298922,4.79360176829448,7.68436610643109,50.9115996434625,51.1672506277108,42.6959671543305,205.954359755142,202.315583511678,56.5907492373088,43.5138438422793,79.9720344350718,408.529918507732,361.227479442996,448.684683641487,154.966388082978,160.652302165831,200.030734293796,275.832803013364,510.988449908765,443.267716800526,400.400247658714,416.721909698974,190.500233633457,12.9491790599745,19.3463193873371,7.24661221754194,0.860423876981386,0.679971333707751,3.2382191498269,1.29955283489534,0.448026887097336,20.5048853392358,21.9855116125695,14.5480162577607,16.9602995764963,25.7743458191325,29.5150898052931,71.3454671178608,42.6640021891999,2.38140145112336,4.05375784760158,3.0331466700887,18.954524033364,33.144049106838,35.7745555146228,23.5940044401945,35.6224609625205,24.4452427091422,26.2257394561563,39.9801604261396,21.6146537087042,2.47194967734374,13.8815382643115,16.8076004870476,10.5148452465816,12.8088080707028,17.455509112868,5.59175283654366,125.895742714965,72.259113850642,5.62005521458901,5.15205035375457,4.19931911695385,4.19331749341113,475.735070749717,261.232844209436,115.35069523961,241.094332106687,171.585071868652,319.785800577163,263.479811222038,15.4795833052481,13.5603597965001,13.6470289554184,48.401626853889,28.6264974517948,20.6911893990126,35.6523017014591,35.415632191393,54.7013453176676,58.4198564498915,52.191860579769,125.988541549901,15.3053274982318,18.1541836961106,16.8913079197391,11.6173738186615,20.8535436919198,18.1091126591527,12.7584924572925,13.5343301436575,2.80885274925294,3.60287069960601,3.9782889915383,10.3562886267751,10.5536726991493,5.76198596675248,10.180023630164,6.88674811115913,7.0962871928194,4.65067889500816,6.43856163359086,4.90414437942112,5.9241545968853,5.91002870684743,5.26947262048062,4.09359964790931,5.26920276698522,3.89198614405078,278.003312001776,147.153595702377,1.65209391491899,4.49565963328025,18.1295012954949,20.2045904518582,17.0105048945163,12.7060620512706,11.7860363237781,7.98947629672748,5.21981967698963,8.23494773620054,7.79139147280835,9.35095418593409,7.01870713628832,6.29173586057955,4.10662294761919,4.18196673834171,16.8804431848243,16.7945313536301,18.0332377076929,18.3286195060783,14.5464365375719,13.4660774189412,14.7341131499519,13.727743762103,15.5428740562961,8.26760998276064,3.26097889795864,16.017130148745,14.7419246334902,16.6397963164792,20.8945925030158,16.1588697034119,14.0044218479781,8.91858026097513,10.2145192868272,5.76578967694971,2.87536413054709,2.60498663367952,2.80833905803104,2.52578877947112,1.61457672169721,1.92977408545347,13.8564892624954,9.09558776498327,12.385338209594,13.0703716046895,7.97946844180907,8.20780661464897,8.80761471278251,8.78101415360095,13.7142575372386,11.9590932410338,9.24837658213425,7.20998584749247,8.80693407516067,6.219909519005,6.03165135757089,2.71952841909355,1.96705709207614,2.75936746304733,225.734129522836,216.724408508984,11.8033160671206,5.30188947129183,50.7968233260173,43.3387006169269,69.3663340699613,32.7387253194996,39.2125666385014,49.8214694188345,40.0762594658145,66.0498238879565,63.6413322493903,257.057053137446,18.3102709918667,11.7523298420388,15.9629220166505,18.3116836499514,3.98235415019888,11.6534705354391,6.65111825322452,9.24164890803901,9.44966057218473,9.22305443831782,10.0787034335606,9.81541069589265,4.63446591900138,10.7452497698177,5.27093042874994,4.12542172992747,141.282436387822,29.1698972330723,15.264324686365,21.005029433096,47.7045228497716,51.0134818341922,53.8075297368936,70.3314032454724,7.97883807416615,5.50763384245932,10.3648347085832,21.6000991353339,9.84933002845024,13.2085305592661,7.16234064018819,10.833299383174,7.28702091574627,203.040705701508,19.6501512917531,6.19160603889667,13.3340059706192,26.3715839806567,33.4900857916512,18.7598102029349,10.8786195196067,13.8551937800421,12.0233977209849,6.68269432610579,14.5514557047322,14.84232110026,14.7967316925868,15.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| ||
|short_description=p1@Ahi1 | |short_description=p1@Ahi1 | ||
}} | }} |
Latest revision as of 21:13, 25 September 2015
Short description: | p1@Ahi1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ahi1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000095801_5end |
EntrezGene: | Ahi1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.87e-15 | 33 |
neuronal stem cell | 1.87e-15 | 33 |
neuroblast | 1.87e-15 | 33 |
electrically signaling cell | 1.87e-15 | 33 |
electrically responsive cell | 4.23e-13 | 39 |
electrically active cell | 4.23e-13 | 39 |
CNS neuron (sensu Vertebrata) | 6.42e-13 | 23 |
neuroblast (sensu Vertebrata) | 6.42e-13 | 23 |
ectodermal cell | 6.73e-10 | 44 |
neurectodermal cell | 6.73e-10 | 44 |
neural cell | 7.87e-10 | 43 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 2.98e-26 | 73 |
nervous system | 8.30e-26 | 75 |
neurectoderm | 3.98e-25 | 64 |
neural plate | 3.98e-25 | 64 |
presumptive neural plate | 3.98e-25 | 64 |
regional part of nervous system | 5.96e-23 | 54 |
ectoderm-derived structure | 1.05e-22 | 95 |
ectoderm | 1.05e-22 | 95 |
presumptive ectoderm | 1.05e-22 | 95 |
neural tube | 2.32e-21 | 52 |
neural rod | 2.32e-21 | 52 |
future spinal cord | 2.32e-21 | 52 |
neural keel | 2.32e-21 | 52 |
ecto-epithelium | 5.39e-21 | 73 |
pre-chordal neural plate | 9.46e-20 | 49 |
brain | 2.61e-18 | 47 |
future brain | 2.61e-18 | 47 |
regional part of brain | 1.06e-17 | 46 |
anterior neural tube | 1.88e-17 | 40 |
gray matter | 6.97e-17 | 34 |
regional part of forebrain | 9.70e-17 | 39 |
forebrain | 9.70e-17 | 39 |
future forebrain | 9.70e-17 | 39 |
structure with developmental contribution from neural crest | 1.53e-14 | 92 |
brain grey matter | 6.70e-14 | 29 |
regional part of telencephalon | 6.70e-14 | 29 |
telencephalon | 6.70e-14 | 29 |
cerebral cortex | 1.91e-09 | 21 |
cerebral hemisphere | 1.91e-09 | 21 |
pallium | 1.91e-09 | 21 |
regional part of cerebral cortex | 5.60e-08 | 17 |
occipital lobe | 1.95e-07 | 10 |
visual cortex | 1.95e-07 | 10 |
neocortex | 1.95e-07 | 10 |