FFCP PHASE1:Mm9::chr8:86424346..86424387,+: Difference between revisions
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{{FFCP|EntrezGene=330814|HGNC=|MCL_coexpression_id=1|UniProt=D6RI60|association_with_transcript=-84bp_to_ENSMUST00000124355_5end|description=CAGE_peak_6_at_Lphn1_5end|id=chr8:86424346..86424387,+|ontology_enrichment_celltype=CL:0000540!6.24e-11!33;CL:0000047!6.24e-11!33;CL:0000031!6.24e-11!33;CL:0000404!6.24e-11!33;CL:0000221!2.87e-10!44;CL:0000133!2.87e-10!44;CL:0000117!6.47e-10!23;CL:0000337!6.47e-10!23;CL:0002319!8.00e-10!43;CL:0000393!2.93e-08!39;CL:0000211!2.93e-08!39;CL:0000055!2.77e-07!50|ontology_enrichment_celltype_v019_2=CL:0000117,3.14e-11,23;CL:0000337,3.14e-11,23;CL:0000221,5.64e-10,44;CL:0000133,5.64e-10,44;CL:0002319,3.29e-09,43;CL:0000540,5.12e-09,33;CL:0000047,5.12e-09,33;CL:0000031,5.12e-09,33;CL:0000404,5.12e-09,33;CL:0000393,5.02e-07,39;CL:0000211,5.02e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!2.35e-29!102;UBERON:0000924!2.35e-29!102;UBERON:0006601!2.35e-29!102;UBERON:0001017!6.23e-29!73;UBERON:0005743!6.23e-29!73;UBERON:0000073!4.70e-28!75;UBERON:0001016!4.70e-28!75;UBERON:0002346!5.30e-26!71;UBERON:0003075!5.30e-26!71;UBERON:0007284!5.30e-26!71;UBERON:0000033!1.30e-24!63;UBERON:0001049!6.77e-23!52;UBERON:0005068!6.77e-23!52;UBERON:0006241!6.77e-23!52;UBERON:0007135!6.77e-23!52;UBERON:0000955!4.25e-22!50;UBERON:0006238!4.25e-22!50;UBERON:0002616!1.78e-21!49;UBERON:0003056!4.33e-19!49;UBERON:0003080!3.89e-17!40;UBERON:0002780!1.57e-16!39;UBERON:0001890!1.57e-16!39;UBERON:0006240!1.57e-16!39;UBERON:0002020!2.81e-15!34;UBERON:0007811!1.24e-13!86;UBERON:0000153!3.94e-13!94;UBERON:0002791!1.74e-12!29;UBERON:0003528!1.74e-12!29;UBERON:0001893!1.74e-12!29;UBERON:0002021!1.80e-08!10;UBERON:0000411!1.80e-08!10;UBERON:0001950!1.80e-08!10;UBERON:0000956!2.28e-08!21;UBERON:0001869!2.28e-08!21;UBERON:0000203!2.28e-08!21;UBERON:0002619!1.98e-07!17;UBERON:0004111!9.37e-07!122|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.01e-41,73;UBERON:0000073,1.99e-40,54;UBERON:0001016,2.75e-40,75;UBERON:0001049,7.09e-37,52;UBERON:0005068,7.09e-37,52;UBERON:0006241,7.09e-37,52;UBERON:0007135,7.09e-37,52;UBERON:0004121,2.95e-32,95;UBERON:0000924,2.95e-32,95;UBERON:0006601,2.95e-32,95;UBERON:0000955,4.80e-32,47;UBERON:0006238,4.80e-32,47;UBERON:0002616,1.00e-30,46;UBERON:0002346,1.20e-29,64;UBERON:0003075,1.20e-29,64;UBERON:0007284,1.20e-29,64;UBERON:0010371,3.19e-26,73;UBERON:0003080,5.98e-25,40;UBERON:0002780,1.14e-23,39;UBERON:0001890,1.14e-23,39;UBERON:0006240,1.14e-23,39;UBERON:0002020,2.55e-22,34;UBERON:0003056,2.07e-20,49;UBERON:0010314,8.87e-20,92;UBERON:0003528,5.78e-18,29;UBERON:0002791,5.78e-18,29;UBERON:0001893,5.78e-18,29;UBERON:0002021,6.35e-18,10;UBERON:0000411,6.35e-18,10;UBERON:0001950,6.35e-18,10;UBERON:0002619,1.52e-13,17;UBERON:0000956,2.38e-12,21;UBERON:0001869,2.38e-12,21;UBERON:0000203,2.38e-12,21;UBERON:0004111,2.42e-12,122;UBERON:0000025,3.40e-12,114;UBERON:0003076,3.58e-12,12;UBERON:0003057,3.58e-12,12;UBERON:0011216,2.99e-10,194;UBERON:0002950,3.53e-07,4;UBERON:0001891,3.53e-07,4;UBERON:0009616,3.53e-07,4;UBERON:0010286,3.53e-07,4;UBERON:0002240,6.51e-07,6;UBERON:0005174,6.51e-07,6;UBERON:0001137,6.51e-07,6;UBERON:0002420,6.90e-07,8;UBERON:0007245,6.90e-07,8;UBERON:0010009,6.90e-07,8;UBERON:0010011,6.90e-07,8;UBERON:0000454,6.90e-07,8;UBERON:0004733,9.00e-07,6;UBERON:0004732,9.00e-07,6;UBERON:0002028,9.00e-07,6;UBERON:0007277,9.00e-07,6|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,1.02730780935303,0.319088635981346,0,0,0,0.202475267389826,0,0,0.137114433605739,0,0.595303031057488,0.0992909512008853,0.261199789138935,0,0,0,0,0,0,0,0,0.635030673459631,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0,3.9119567217402,0,0,0.388859798148567,0.279972843250725,0,0,0,0.336093799142464,0.257259436035947,0,0,1.21389876515759,1.05798195854407,0.633831403506179,0,0,0.449949858640699,0.988866362566974,0,1.49800055259202,2.30530983192933,0.518448061542388,0.945041568321835,0.210324961351382,4.57041575046086,2.20868540951614,0.734944795289724,0.383381884072945,0,4.40463523997555,4.34136949489638,6.14426133024974,1.45074916503213,0.823388792421687,2.6045668527838,3.62937898701795,1.68828783009504,3.97275444219706,3.24091444021034,1.42371680799103,0.745597783301202,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,1.26759077799012,0,0,0,0,0,0,0,0.258937883647172,0.593768556259299,0.520455980298408,0.608930956624282,1.15307748628029,0.150722640552623,0.470354828542819,0.502666365318702,0,0.722996784599558,0,0.161766849947409,0,0,0,1.46390398505774,2.09446706813455,0.255457055208591,0,0,0,2.09706895166752,0.915001205637253,1.25654352112864,4.51943232499919,2.55715457330331,1.87009240103604,3.73154905055843,0.509196819251581,0.248813941220186,0.252722758433675,0.420883711772948,0.390361328888111,0.689706313300419,1.0803727788321,0.30140963567143,0.748401490664606,0.512454881139399,0.655912071918102,0.517406741478031,0.431135985865684,0.189106080167819,0.527853372491847,0,0.278047249225598,0.348252166522167,0,0.199034266818493,0,0,0,0.207125772535502,0.234526059981096,0.180062061461015,0,0.196764231747404,0,0.465067889500816,0,0.233530684734339,0,0,0.0810688095458557,0.292399974850665,0,0.134206418760372,3.78521907415429,1.44066457330998,0,0,0.213288250535234,0,0.644337306610467,0.201683524623343,0,0.380451252225118,0,0,0,0,0.19496408711912,0,0,0,0.379335801906163,0.456994050438915,0,0.203651327845314,0,0.280543279561274,0.316182685621286,0,0,0,0,0,0,0,0.405720242777006,0,0.25462585178142,0,0.162135226775035,0,1.43768206527355,0,0,0,0,0,0,0.37898282354097,0.488894929326078,0.169745085775188,0,0.167506257441816,0.238043640886014,0.390267295715598,0.788175720530955,0.221464689648775,0.318909537314974,0,0,0,0,0,0,0,2.40825884981688,1.87538698547525,0,0,0,0.390438744296638,0.646270193198397,0.238968797952552,0.445597348164788,0.566153061577665,0.404810701674894,1.16902343164525,1.58115111178609,1.92792789853084,1.13552068166615,0.35613120733451,0.651547837414304,0.164970122972535,0,0.485561272309963,0.302323556964751,0.188605079755898,0,0,0,0,0.356497378384721,0,0,0,0.680879211507576,0.18006109403131,1.16422815404479,0.643011105094777,1.24138163549592,1.24858172321449,1.48094118541909,2.13125464380219,0,0,0,0.49465875882444,0.484393280087717,0.120625849856312,0,0.164140899745061,0,2.03967832211561,0,0,0,0,0,0.228778173206523,0,0,0,0,0.474503990371703,0.609958401380546,0.216010681643603,0.418176592028937,0.218362563746178,0,0.330613822901344,0,0,0.621339313086926,0.56369293868419,0.299033092087958,0.496375471371293,0,0.258319646955462,0.168956125490778,0.469428954583016,1.0416350787516,0.629156066554265,0.241584120826006,0.288030006257865,0,0,0,0,0,0.198681354781265,0,0.147689527174577,0,0,0.201652370273681,0.0974578807397524,0.288635524920988,0.116876902181569,0,0,0,0,0,0,0.549454872801795,0.214368379079066,1.00314420807073,3.3885110557024,5.06357760157895,4.58316410751517,8.07709957015332,6.16574267793578,6.7985450765073,3.37511250115903,3.15224842256954,4.53142408984205,5.1776031175182,0.207574695168353,0.798049746802062,0.512200817262403,0.486213434136588,0.838452650511929,0.183843508450014,0.222246727801615,0.412070114477788,0.64183841918363,0,0,0.754505365544305,0.37456602987953,0.448176066834085,0.459483751644906,0.476293691283074,0.115884325944855,0.964546102318525,0.412085900803307,0.441596760403192,1.02860775715625,0.354951612318675,0.715308569841963,0.872078499793971,0.564656282491984,0.169229215783353,0,0.526139422875686,0.407412341537585,0.561142271657738,0.355905054372522,0.394017929502254,0.409231043169689,0.154936841185966,0.192906610981141,0.249810577937946,0.233931608445408,1.28922632428979,0.191288332068843,0.220591419119515,0.695603506861264|short_description=p6@Lphn1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=330814 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=D6RI60 | |||
|association_with_transcript=-84bp_to_ENSMUST00000124355_5end | |||
|cluster_id=chr8:86424346..86424387,+ | |||
|description=CAGE_peak_6_at_Lphn1_5end | |||
|id=chr8:86424346..86424387,+ | |||
|ontology_enrichment_celltype=CL:0000540!6.24e-11!33;CL:0000047!6.24e-11!33;CL:0000031!6.24e-11!33;CL:0000404!6.24e-11!33;CL:0000221!2.87e-10!44;CL:0000133!2.87e-10!44;CL:0000117!6.47e-10!23;CL:0000337!6.47e-10!23;CL:0002319!8.00e-10!43;CL:0000393!2.93e-08!39;CL:0000211!2.93e-08!39;CL:0000055!2.77e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.14e-11,23;CL:0000337,3.14e-11,23;CL:0000221,5.64e-10,44;CL:0000133,5.64e-10,44;CL:0002319,3.29e-09,43;CL:0000540,5.12e-09,33;CL:0000047,5.12e-09,33;CL:0000031,5.12e-09,33;CL:0000404,5.12e-09,33;CL:0000393,5.02e-07,39;CL:0000211,5.02e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!2.35e-29!102;UBERON:0000924!2.35e-29!102;UBERON:0006601!2.35e-29!102;UBERON:0001017!6.23e-29!73;UBERON:0005743!6.23e-29!73;UBERON:0000073!4.70e-28!75;UBERON:0001016!4.70e-28!75;UBERON:0002346!5.30e-26!71;UBERON:0003075!5.30e-26!71;UBERON:0007284!5.30e-26!71;UBERON:0000033!1.30e-24!63;UBERON:0001049!6.77e-23!52;UBERON:0005068!6.77e-23!52;UBERON:0006241!6.77e-23!52;UBERON:0007135!6.77e-23!52;UBERON:0000955!4.25e-22!50;UBERON:0006238!4.25e-22!50;UBERON:0002616!1.78e-21!49;UBERON:0003056!4.33e-19!49;UBERON:0003080!3.89e-17!40;UBERON:0002780!1.57e-16!39;UBERON:0001890!1.57e-16!39;UBERON:0006240!1.57e-16!39;UBERON:0002020!2.81e-15!34;UBERON:0007811!1.24e-13!86;UBERON:0000153!3.94e-13!94;UBERON:0002791!1.74e-12!29;UBERON:0003528!1.74e-12!29;UBERON:0001893!1.74e-12!29;UBERON:0002021!1.80e-08!10;UBERON:0000411!1.80e-08!10;UBERON:0001950!1.80e-08!10;UBERON:0000956!2.28e-08!21;UBERON:0001869!2.28e-08!21;UBERON:0000203!2.28e-08!21;UBERON:0002619!1.98e-07!17;UBERON:0004111!9.37e-07!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.01e-41,73;UBERON:0000073,1.99e-40,54;UBERON:0001016,2.75e-40,75;UBERON:0001049,7.09e-37,52;UBERON:0005068,7.09e-37,52;UBERON:0006241,7.09e-37,52;UBERON:0007135,7.09e-37,52;UBERON:0004121,2.95e-32,95;UBERON:0000924,2.95e-32,95;UBERON:0006601,2.95e-32,95;UBERON:0000955,4.80e-32,47;UBERON:0006238,4.80e-32,47;UBERON:0002616,1.00e-30,46;UBERON:0002346,1.20e-29,64;UBERON:0003075,1.20e-29,64;UBERON:0007284,1.20e-29,64;UBERON:0010371,3.19e-26,73;UBERON:0003080,5.98e-25,40;UBERON:0002780,1.14e-23,39;UBERON:0001890,1.14e-23,39;UBERON:0006240,1.14e-23,39;UBERON:0002020,2.55e-22,34;UBERON:0003056,2.07e-20,49;UBERON:0010314,8.87e-20,92;UBERON:0003528,5.78e-18,29;UBERON:0002791,5.78e-18,29;UBERON:0001893,5.78e-18,29;UBERON:0002021,6.35e-18,10;UBERON:0000411,6.35e-18,10;UBERON:0001950,6.35e-18,10;UBERON:0002619,1.52e-13,17;UBERON:0000956,2.38e-12,21;UBERON:0001869,2.38e-12,21;UBERON:0000203,2.38e-12,21;UBERON:0004111,2.42e-12,122;UBERON:0000025,3.40e-12,114;UBERON:0003076,3.58e-12,12;UBERON:0003057,3.58e-12,12;UBERON:0011216,2.99e-10,194;UBERON:0002950,3.53e-07,4;UBERON:0001891,3.53e-07,4;UBERON:0009616,3.53e-07,4;UBERON:0010286,3.53e-07,4;UBERON:0002240,6.51e-07,6;UBERON:0005174,6.51e-07,6;UBERON:0001137,6.51e-07,6;UBERON:0002420,6.90e-07,8;UBERON:0007245,6.90e-07,8;UBERON:0010009,6.90e-07,8;UBERON:0010011,6.90e-07,8;UBERON:0000454,6.90e-07,8;UBERON:0004733,9.00e-07,6;UBERON:0004732,9.00e-07,6;UBERON:0002028,9.00e-07,6;UBERON:0007277,9.00e-07,6 | |||
|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,1.02730780935303,0.319088635981346,0,0,0,0.202475267389826,0,0,0.137114433605739,0,0.595303031057488,0.0992909512008853,0.261199789138935,0,0,0,0,0,0,0,0,0.635030673459631,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0,3.9119567217402,0,0,0.388859798148567,0.279972843250725,0,0,0,0.336093799142464,0.257259436035947,0,0,1.21389876515759,1.05798195854407,0.633831403506179,0,0,0.449949858640699,0.988866362566974,0,1.49800055259202,2.30530983192933,0.518448061542388,0.945041568321835,0.210324961351382,4.57041575046086,2.20868540951614,0.734944795289724,0.383381884072945,0,4.40463523997555,4.34136949489638,6.14426133024974,1.45074916503213,0.823388792421687,2.6045668527838,3.62937898701795,1.68828783009504,3.97275444219706,3.24091444021034,1.42371680799103,0.745597783301202,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,1.26759077799012,0,0,0,0,0,0,0,0.258937883647172,0.593768556259299,0.520455980298408,0.608930956624282,1.15307748628029,0.150722640552623,0.470354828542819,0.502666365318702,0,0.722996784599558,0,0.161766849947409,0,0,0,1.46390398505774,2.09446706813455,0.255457055208591,0,0,0,2.09706895166752,0.915001205637253,1.25654352112864,4.51943232499919,2.55715457330331,1.87009240103604,3.73154905055843,0.509196819251581,0.248813941220186,0.252722758433675,0.420883711772948,0.390361328888111,0.689706313300419,1.0803727788321,0.30140963567143,0.748401490664606,0.512454881139399,0.655912071918102,0.517406741478031,0.431135985865684,0.189106080167819,0.527853372491847,0,0.278047249225598,0.348252166522167,0,0.199034266818493,0,0,0,0.207125772535502,0.234526059981096,0.180062061461015,0,0.196764231747404,0,0.465067889500816,0,0.233530684734339,0,0,0.0810688095458557,0.292399974850665,0,0.134206418760372,3.78521907415429,1.44066457330998,0,0,0.213288250535234,0,0.644337306610467,0.201683524623343,0,0.380451252225118,0,0,0,0,0.19496408711912,0,0,0,0.379335801906163,0.456994050438915,0,0.203651327845314,0,0.280543279561274,0.316182685621286,0,0,0,0,0,0,0,0.405720242777006,0,0.25462585178142,0,0.162135226775035,0,1.43768206527355,0,0,0,0,0,0,0.37898282354097,0.488894929326078,0.169745085775188,0,0.167506257441816,0.238043640886014,0.390267295715598,0.788175720530955,0.221464689648775,0.318909537314974,0,0,0,0,0,0,0,2.40825884981688,1.87538698547525,0,0,0,0.390438744296638,0.646270193198397,0.238968797952552,0.445597348164788,0.566153061577665,0.404810701674894,1.16902343164525,1.58115111178609,1.92792789853084,1.13552068166615,0.35613120733451,0.651547837414304,0.164970122972535,0,0.485561272309963,0.302323556964751,0.188605079755898,0,0,0,0,0.356497378384721,0,0,0,0.680879211507576,0.18006109403131,1.16422815404479,0.643011105094777,1.24138163549592,1.24858172321449,1.48094118541909,2.13125464380219,0,0,0,0.49465875882444,0.484393280087717,0.120625849856312,0,0.164140899745061,0,2.03967832211561,0,0,0,0,0,0.228778173206523,0,0,0,0,0.474503990371703,0.609958401380546,0.216010681643603,0.418176592028937,0.218362563746178,0,0.330613822901344,0,0,0.621339313086926,0.56369293868419,0.299033092087958,0.496375471371293,0,0.258319646955462,0.168956125490778,0.469428954583016,1.0416350787516,0.629156066554265,0.241584120826006,0.288030006257865,0,0,0,0,0,0.198681354781265,0,0.147689527174577,0,0,0.201652370273681,0.0974578807397524,0.288635524920988,0.116876902181569,0,0,0,0,0,0,0.549454872801795,0.214368379079066,1.00314420807073,3.3885110557024,5.06357760157895,4.58316410751517,8.07709957015332,6.16574267793578,6.7985450765073,3.37511250115903,3.15224842256954,4.53142408984205,5.1776031175182,0.207574695168353,0.798049746802062,0.512200817262403,0.486213434136588,0.838452650511929,0.183843508450014,0.222246727801615,0.412070114477788,0.64183841918363,0,0,0.754505365544305,0.37456602987953,0.448176066834085,0.459483751644906,0.476293691283074,0.115884325944855,0.964546102318525,0.412085900803307,0.441596760403192,1.02860775715625,0.354951612318675,0.715308569841963,0.872078499793971,0.564656282491984,0.169229215783353,0,0.526139422875686,0.407412341537585,0.561142271657738,0.355905054372522,0.394017929502254,0.409231043169689,0.154936841185966,0.192906610981141,0.249810577937946,0.233931608445408,1.28922632428979,0.191288332068843,0.220591419119515,0.695603506861264 | |||
|short_description=p6@Lphn1 | |||
}} |
Latest revision as of 20:53, 25 September 2015
Short description: | p6@Lphn1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Lphn1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -84bp_to_ENSMUST00000124355_5end |
EntrezGene: | Lphn1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.14e-11 | 23 |
neuroblast (sensu Vertebrata) | 3.14e-11 | 23 |
ectodermal cell | 5.64e-10 | 44 |
neurectodermal cell | 5.64e-10 | 44 |
neural cell | 3.29e-09 | 43 |
neuron | 5.12e-09 | 33 |
neuronal stem cell | 5.12e-09 | 33 |
neuroblast | 5.12e-09 | 33 |
electrically signaling cell | 5.12e-09 | 33 |
electrically responsive cell | 5.02e-07 | 39 |
electrically active cell | 5.02e-07 | 39 |