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FFCP PHASE1:Mm9::chr7:133416020..133416038,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=104175
|EntrezGene=104175
|HGNC=
|HGNC=
|MCL_coexpression_id=22
|TSSclassifier=NA
|UniProt=Q8QZX0
|UniProt=Q8QZX0
|association_with_transcript=-94bp_to_ENSMUST00000056028,NM_145587,uc009jqw.1_5end
|association_with_transcript=-94bp_to_ENSMUST00000056028,NM_145587,uc009jqw.1_5end
|cluster_id=chr7:133416020..133416038,+
|description=CAGE_peak_4_at_Sbk1_5end
|description=CAGE_peak_4_at_Sbk1_5end
|id=chr7:133416020..133416038,+
|id=chr7:133416020..133416038,+
|ontology_enrichment_celltype=CL:0000117!4.46e-14!23;CL:0000337!4.46e-14!23;CL:0000540!3.01e-12!33;CL:0000047!3.01e-12!33;CL:0000031!3.01e-12!33;CL:0000404!3.01e-12!33;CL:0000221!1.82e-09!44;CL:0000133!1.82e-09!44;CL:0002319!2.83e-09!43;CL:0000393!6.24e-08!39;CL:0000211!6.24e-08!39
|ontology_enrichment_celltype=CL:0000117!4.46e-14!23;CL:0000337!4.46e-14!23;CL:0000540!3.01e-12!33;CL:0000047!3.01e-12!33;CL:0000031!3.01e-12!33;CL:0000404!3.01e-12!33;CL:0000221!1.82e-09!44;CL:0000133!1.82e-09!44;CL:0002319!2.83e-09!43;CL:0000393!6.24e-08!39;CL:0000211!6.24e-08!39
|ontology_enrichment_celltype_v019_2=CL:0000117,1.26e-18,23;CL:0000337,1.26e-18,23;CL:0000540,9.54e-16,33;CL:0000047,9.54e-16,33;CL:0000031,9.54e-16,33;CL:0000404,9.54e-16,33;CL:0000393,1.40e-11,39;CL:0000211,1.40e-11,39;CL:0000221,8.09e-11,44;CL:0000133,8.09e-11,44;CL:0002319,1.46e-10,43
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!5.76e-17!71;UBERON:0003075!5.76e-17!71;UBERON:0007284!5.76e-17!71;UBERON:0004121!4.42e-15!102;UBERON:0000924!4.42e-15!102;UBERON:0006601!4.42e-15!102;UBERON:0001017!4.98e-15!73;UBERON:0005743!4.98e-15!73;UBERON:0000073!9.20e-15!75;UBERON:0001016!9.20e-15!75;UBERON:0001049!1.18e-13!52;UBERON:0005068!1.18e-13!52;UBERON:0006241!1.18e-13!52;UBERON:0007135!1.18e-13!52;UBERON:0000033!1.40e-13!63;UBERON:0003056!7.28e-13!49;UBERON:0002616!1.58e-11!49;UBERON:0000955!2.01e-11!50;UBERON:0006238!2.01e-11!50;UBERON:0002020!5.42e-11!34;UBERON:0002780!3.67e-10!39;UBERON:0001890!3.67e-10!39;UBERON:0006240!3.67e-10!39;UBERON:0000153!5.75e-10!94;UBERON:0003080!6.81e-10!40;UBERON:0007811!3.71e-09!86;UBERON:0002791!3.51e-08!29;UBERON:0003528!3.51e-08!29;UBERON:0001893!3.51e-08!29
|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.93e-16,64;UBERON:0003075,2.93e-16,64;UBERON:0007284,2.93e-16,64;UBERON:0001017,1.91e-14,73;UBERON:0000073,3.31e-14,54;UBERON:0001016,1.36e-13,75;UBERON:0010371,1.76e-13,73;UBERON:0004121,2.11e-13,95;UBERON:0000924,2.11e-13,95;UBERON:0006601,2.11e-13,95;UBERON:0003056,6.35e-13,49;UBERON:0001049,1.08e-12,52;UBERON:0005068,1.08e-12,52;UBERON:0006241,1.08e-12,52;UBERON:0007135,1.08e-12,52;UBERON:0002020,1.54e-11,34;UBERON:0002780,3.65e-10,39;UBERON:0001890,3.65e-10,39;UBERON:0006240,3.65e-10,39;UBERON:0002616,7.88e-10,46;UBERON:0003080,1.17e-09,40;UBERON:0000955,2.17e-09,47;UBERON:0006238,2.17e-09,47;UBERON:0010314,2.42e-09,92;UBERON:0003528,4.99e-08,29;UBERON:0002791,4.99e-08,29;UBERON:0001893,4.99e-08,29
|phase1_expression=1.28119077683835,0.697950815278722,0.454999239389536,1.51232105653415,0.500895729946347,0.33575854382378,0.233612640595526,0.387369970324729,0,0.234064526321993,0,0.159544317990673,0.856003649656029,0.174840804837995,0.333109761815663,0.607425802169478,0,1.89277299214943,1.23402990245165,1.27316895539409,1.27564935226605,0,0.261199789138935,0.47997726838022,0,0,0.430761996159075,0.430942465371778,0,0,0.221730510655305,0,0,0,0.288851619751275,0.332469290716985,0,0,0,0,0,0,0,0.251793635951155,0.101376931219515,0.183546752161682,0.782391344348039,0.436050312760893,0.659058548203415,0,0.419959264876088,0,1.8456086666351,0.725362142011344,0.336093799142464,0,0,0,30.5497855897993,21.6886301501533,21.5502677192101,0,0,0,0,0,0.299600110518405,3.45796474789399,20.2194744001531,19.9808788730902,18.5085965989216,13.7112472513826,12.8103753751936,16.6587486932338,20.1275489138296,19.3035945188104,2.20231761998777,1.27687338085188,1.84327839907492,22.6844414895933,31.7462123300361,23.4411016750542,5.02529398202486,2.25105044012672,2.29197371665215,17.6777151284201,17.5117167382897,20.6903384866084,0.757261933331841,0.377857800533928,0.579728977403356,0,0.679971333707751,0,0.649776417447669,0.448026887097336,0.561777680527007,0.170430322578058,0,0.35333957451034,1.54927761754349,0,0,7.11066703153331,0,0,0,1.1418387971906,0.258937883647172,0.742210695324124,1.38788261412909,0.304465478312141,0.691846491768175,0.452167921657868,0.823120949949934,1.88499886994513,0,0.578397427679647,0,1.29413479957927,1.10420759230197,0,0,9.36898550436951,25.1336048176146,0,0,0,0.254140454146129,0.449371918214468,0.915001205637253,20.1046963380583,1.39059456153821,1.27857728665165,1.66230435647648,0.648965052271031,0.81471491080253,0.373220911830279,0.252722758433675,0.420883711772948,5.59517904739626,2.98872735763515,4.50155324513373,4.37043971723574,6.05524842446818,4.74020765053944,5.24729657534481,0.517406741478031,2.80238390812695,2.08016688184601,2.46331573829528,1.31517439456545,1.66828349535359,0.348252166522167,0.411564272815887,2.58744546864041,0,0.257347907114715,0,0.414251545071004,0.469052119962192,1.44049649168812,0.710234206755631,0.983821158737019,0.617068451549513,0.697601834251224,1.07309360559848,0.350296027101508,0.329119699826961,0,0.0810688095458557,0.438599962275997,0,0,0.630869845692382,13.0688857721691,0.330418782983798,0.528901133327089,2.55945900642281,1.85789337488351,1.28867461322093,0.201683524623343,0.667134131534611,0,0,0.164698954724011,0,0.198956472041151,0.19496408711912,0,0,0,1.70701110857774,1.14248512609729,0,0.814605311381257,0.969762435838129,0.561086559122548,0.505892296994058,0.590440591918409,0.470996183524124,0.616985819609003,0.592905254174298,0.166845105716094,0.196558995113203,0,0,0.241177159752417,0,0.287696137450811,1.29708181420028,0.823684239564244,0,0.372140947668503,0.312037673114561,0.505157755894224,0.358794827043824,0.482443521363367,0.184753190166605,1.70542270593436,1.30371981153621,1.01847051465113,0.469380496577004,0.335012514883631,0.476087281772027,0.780534591431195,0.157635144106191,0.221464689648775,0.159454768657487,0,0,0.144649058581512,0,0,0.491764273019036,0.275936746304732,0.642202359951168,1.52375192569864,0.327869890753351,0.252470927204373,0.631016438832513,1.56175497718655,1.72338718186239,0.477937595905104,1.55959071857676,0.283076530788832,0,2.04579100537918,1.18586333383957,0.642642632843614,0.283880170416537,2.67098405500883,2.60619134965722,0.659880491890142,0,0,0.302323556964751,1.13163047853539,0.295301892880773,0.307435147943927,0,0,0.712994756769443,0,0,0,0.340439605753788,3.78128297465751,2.45781499187234,3.21505552547388,2.30542303734956,1.42695054081656,2.30368628842969,1.2178597964584,0,0,0,0.65954501176592,0.484393280087717,0.241251699712623,0.716234064018819,0.164140899745061,0,0.927126510052548,0.170870880797853,0.82554747185289,0.185194527369712,0.565105371014073,0.136694227721025,0.228778173206523,0,0,0.276399947608848,0,1.89801596148681,1.82987520414164,0.86404272657441,0.627264888043406,0.218362563746178,0.134864346384821,0.0826534557253359,0.26175594198403,0.388844919875379,0,1.12738587736838,2.24274819065968,0.992750942742586,3.69457257853691,2.71235629303235,2.02747350588934,2.11243029562357,1.3020438484395,0.629156066554265,0.724752362478018,0.864090018773596,0,1.62180172232131,0.616265742988964,0.389762468933385,0.179026695667481,0.198681354781265,0.360586348559907,0.886137163047463,0.908698049533329,0.685861259894999,0.806609481094724,0.682205165178267,0.962118416403295,1.05189211963412,0.226730383615211,0,0.0897138566094757,0,0.19318959403219,0,0.183151624267265,0.428736758158132,0,2.82375921308533,2.76195141904306,1.71868654031819,3.09335728218638,0.685082519770642,2.2661816921691,0.675022500231806,0.900642406448441,0,0.51776031175182,6.2272408550506,5.98537310101547,2.39027048055788,1.45864030240976,3.77303692730368,2.20612210140017,2.66696073361938,0.824140228955577,0.320919209591815,1.76888048234658,1.01391719956096,1.1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|phase1_expression=1.28119077683835,0.697950815278722,0.454999239389536,1.51232105653415,0.500895729946347,0.33575854382378,0.233612640595526,0.387369970324729,0,0.234064526321993,0,0.159544317990673,0.856003649656029,0.174840804837995,0.333109761815663,0.607425802169478,0,1.89277299214943,1.23402990245165,1.27316895539409,1.27564935226605,0,0.261199789138935,0.47997726838022,0,0,0.430761996159075,0.430942465371778,0,0,0.221730510655305,0,0,0,0.288851619751275,0.332469290716985,0,0,0,0,0,0,0,0.251793635951155,0.101376931219515,0.183546752161682,0.782391344348039,0.436050312760893,0.659058548203415,0,0.419959264876088,0,1.8456086666351,0.725362142011344,0.336093799142464,0,0,0,30.5497855897993,21.6886301501533,21.5502677192101,0,0,0,0,0,0.299600110518405,3.45796474789399,20.2194744001531,19.9808788730902,18.5085965989216,13.7112472513826,12.8103753751936,16.6587486932338,20.1275489138296,19.3035945188104,2.20231761998777,1.27687338085188,1.84327839907492,22.6844414895933,31.7462123300361,23.4411016750542,5.02529398202486,2.25105044012672,2.29197371665215,17.6777151284201,17.5117167382897,20.6903384866084,0.757261933331841,0.377857800533928,0.579728977403356,0,0.679971333707751,0,0.649776417447669,0.448026887097336,0.561777680527007,0.170430322578058,0,0.35333957451034,1.54927761754349,0,0,7.11066703153331,0,0,0,1.1418387971906,0.258937883647172,0.742210695324124,1.38788261412909,0.304465478312141,0.691846491768175,0.452167921657868,0.823120949949934,1.88499886994513,0,0.578397427679647,0,1.29413479957927,1.10420759230197,0,0,9.36898550436951,25.1336048176146,0,0,0,0.254140454146129,0.449371918214468,0.915001205637253,20.1046963380583,1.39059456153821,1.27857728665165,1.66230435647648,0.648965052271031,0.81471491080253,0.373220911830279,0.252722758433675,0.420883711772948,5.59517904739626,2.98872735763515,4.50155324513373,4.37043971723574,6.05524842446818,4.74020765053944,5.24729657534481,0.517406741478031,2.80238390812695,2.08016688184601,2.46331573829528,1.31517439456545,1.66828349535359,0.348252166522167,0.411564272815887,2.58744546864041,0,0.257347907114715,0,0.414251545071004,0.469052119962192,1.44049649168812,0.710234206755631,0.983821158737019,0.617068451549513,0.697601834251224,1.07309360559848,0.350296027101508,0.329119699826961,0,0.0810688095458557,0.438599962275997,0,0,0.630869845692382,13.0688857721691,0.330418782983798,0.528901133327089,2.55945900642281,1.85789337488351,1.28867461322093,0.201683524623343,0.667134131534611,0,0,0.164698954724011,0,0.198956472041151,0.19496408711912,0,0,0,1.70701110857774,1.14248512609729,0,0.814605311381257,0.969762435838129,0.561086559122548,0.505892296994058,0.590440591918409,0.470996183524124,0.616985819609003,0.592905254174298,0.166845105716094,0.196558995113203,0,0,0.241177159752417,0,0.287696137450811,1.29708181420028,0.823684239564244,0,0.372140947668503,0.312037673114561,0.505157755894224,0.358794827043824,0.482443521363367,0.184753190166605,1.70542270593436,1.30371981153621,1.01847051465113,0.469380496577004,0.335012514883631,0.476087281772027,0.780534591431195,0.157635144106191,0.221464689648775,0.159454768657487,0,0,0.144649058581512,0,0,0.491764273019036,0.275936746304732,0.642202359951168,1.52375192569864,0.327869890753351,0.252470927204373,0.631016438832513,1.56175497718655,1.72338718186239,0.477937595905104,1.55959071857676,0.283076530788832,0,2.04579100537918,1.18586333383957,0.642642632843614,0.283880170416537,2.67098405500883,2.60619134965722,0.659880491890142,0,0,0.302323556964751,1.13163047853539,0.295301892880773,0.307435147943927,0,0,0.712994756769443,0,0,0,0.340439605753788,3.78128297465751,2.45781499187234,3.21505552547388,2.30542303734956,1.42695054081656,2.30368628842969,1.2178597964584,0,0,0,0.65954501176592,0.484393280087717,0.241251699712623,0.716234064018819,0.164140899745061,0,0.927126510052548,0.170870880797853,0.82554747185289,0.185194527369712,0.565105371014073,0.136694227721025,0.228778173206523,0,0,0.276399947608848,0,1.89801596148681,1.82987520414164,0.86404272657441,0.627264888043406,0.218362563746178,0.134864346384821,0.0826534557253359,0.26175594198403,0.388844919875379,0,1.12738587736838,2.24274819065968,0.992750942742586,3.69457257853691,2.71235629303235,2.02747350588934,2.11243029562357,1.3020438484395,0.629156066554265,0.724752362478018,0.864090018773596,0,1.62180172232131,0.616265742988964,0.389762468933385,0.179026695667481,0.198681354781265,0.360586348559907,0.886137163047463,0.908698049533329,0.685861259894999,0.806609481094724,0.682205165178267,0.962118416403295,1.05189211963412,0.226730383615211,0,0.0897138566094757,0,0.19318959403219,0,0.183151624267265,0.428736758158132,0,2.82375921308533,2.76195141904306,1.71868654031819,3.09335728218638,0.685082519770642,2.2661816921691,0.675022500231806,0.900642406448441,0,0.51776031175182,6.2272408550506,5.98537310101547,2.39027048055788,1.45864030240976,3.77303692730368,2.20612210140017,2.66696073361938,0.824140228955577,0.320919209591815,1.76888048234658,1.01391719956096,1.13175804831646,2.52832070168682,2.4969809437899,2.87177344778066,1.90517476513229,2.66533949673168,2.31491064556446,2.47251540481984,1.91358596174717,1.71434626192708,0.887379030796687,2.14592570952589,0.436039249896986,1.97629698872194,2.03075058940024,1.64635175585495,1.57841826862706,1.90125759384206,0.561142271657738,2.01679530811096,2.65962102414021,2.04615521584845,2.47898945897546,1.73615949883027,5.9954538705107,1.87145286756327,2.14871054048298,1.14772999241306,0.441182838239031,0.463735671240843
|short_description=p4@Sbk1
|short_description=p4@Sbk1
}}
}}

Latest revision as of 20:40, 25 September 2015

Short description:p4@Sbk1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Sbk1_5end
Coexpression cluster:MCL_coexpression_mm9:22
Association with transcript: -94bp_to_ENSMUST00000056028, NM_145587, uc009jqw.1_5end
EntrezGene:Sbk1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Sbk1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.28
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.51
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.39
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.16
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.86
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.17
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.61
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.89
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.23
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.27
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.28
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.48
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.43
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.85
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C330.55
Mouse Granule cells, donor2.CNhs12357.11731-123E321.69
Mouse Granule cells, donor3.CNhs12108.11636-122C721.55
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E83.46
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D520.22
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F519.98
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D918.51
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F113.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D512.81
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D216.66
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F220.13
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D619.30
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.28
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.84
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D422.68
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F431.75
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D823.44
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.03
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.25
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.29
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D617.68
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F617.51
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E120.69
Mouse Schwann, donor1.CNhs12507.11728-123D90.76
Mouse Schwann, donor2.CNhs12573.11746-123F90.38
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.55
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.14
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.74
adrenal gland, embryo E14.CNhs11038.406-44C51.39
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.82
adrenal gland, neonate N25.CNhs11223.1377-27I31.88
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.58
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F51.29
bone (os femoris), neonate N16.CNhs11225.1525-43A61.10
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B29.37
cerebellum, neonate N30.CNhs11135.1395-42I225.13
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.25
corpora quadrigemina, adult.CNhs10501.16-22A40.45
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F120.10
cortex, adult.CNhs10473.12-14D51.39
cortex, neonate N30.CNhs11107.1392-42F21.28
diencephalon, adult.CNhs10482.20-12F21.66
diencephalon, neonate N30.CNhs11201.1388-42B20.65
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.81
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C65.60
eyeball, embryo E14.CNhs10521.399-16E22.99
eyeball, embryo E15.CNhs10593.426-16C94.50
eyeball, embryo E17.CNhs11023.1261-18D44.37
eyeball, neonate N00.CNhs11207.633-15C66.06
eyeball, neonate N01.CNhs11140.1532-43E74.74
eyeball, neonate N02.CNhs11205.1551-44G85.25
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E22.80
forelimb, embryo E12.CNhs10600.359-14H22.08
forelimb, embryo E13.CNhs10589.384-1E22.46
forelimb, embryo E14.CNhs10577.413-26A81.32
forelimb, embryo E15.CNhs11007.437-20E71.67
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I62.59
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I91.44
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C80.98
heart, embryo E16.CNhs11021.457-17C60.62
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G31.07
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.44
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.63
hippocampus, neonate N00.CNhs11228.627-43G113.07
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I52.56
intestine, embryo E13.CNhs11010.381-16D51.86
intestine, embryo E15.CNhs10602.976-16D81.29
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I91.71
kidney, embryo E15.CNhs10997.434-16F81.14
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.81
kidney, embryo E18.CNhs11001.1288-20C70.97
kidney, neonate N00.CNhs11214.646-21G70.56
kidney, neonate N10.CNhs11206.758-6D50.51
kidney, neonate N20.CNhs11113.832-19I10.59
kidney, neonate N25.CNhs11122.1353-25F30.47
kidney, neonate N30.CNhs11203.1385-42H10.62
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F41.30
liver, neonate N03.CNhs11123.1345-25G20.82
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G21.71
lung, embryo E14.CNhs10604.404-26F81.30
lung, embryo E15.CNhs11020.432-17C51.02
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.78
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C20.64
medulla oblongata, neonate N30.CNhs11200.1396-42A31.52
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.33
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.72
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.56
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.05
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H72.67
ovary, neonate N00.CNhs11217.1299-22I42.61
oviduct, adult pregnant day01.CNhs10500.988-6G60.66
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E51.13
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E63.78
pituitary gland, embryo E13.CNhs11009.370-44C72.46
pituitary gland, embryo E14.CNhs11037.398-44A53.22
pituitary gland, embryo E15.CNhs10592.427-16B92.31
pituitary gland, embryo E16.CNhs11036.449-43F61.43
pituitary gland, embryo E17.CNhs11039.1265-44F52.30
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.66
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H30.24
skin, neonate N06.CNhs11097.693-20I50.72
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.93
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.83
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.57
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.28
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.90
stomach, embryo E15.CNhs10603.1252-16G81.83
stomach, embryo E16.CNhs11022.459-17D40.86
stomach, embryo E17.CNhs11006.1035-18D50.63
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F52.24
testis, embryo E15.CNhs11034.443-27C50.99
testis, embryo E16.CNhs11033.470-26G53.69
testis, embryo E17.CNhs11029.486-18I52.71
testis, embryo E18.CNhs11027.503-18G52.03
testis, neonate N00.CNhs11189.1300-22B72.11
testis, neonate N07.CNhs11222.726-26I41.30
testis, neonate N10.CNhs11204.763-44D90.63
testis, neonate N20.CNhs11110.839-18H30.72
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I41.62
thymus, embryo E15.CNhs11005.430-45I20.62
thymus, embryo E16.CNhs11002.456-26C50.39
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.36
thymus, neonate N03.CNhs11137.2104-43C70.89
thymus, neonate N06.CNhs11197.681-26C40.91
thymus, neonate N07.CNhs11211.713-19D30.69
thymus, neonate N10.CNhs11194.748-24E40.81
thymus, neonate N20.CNhs11186.820-7A20.68
thymus, neonate N25.CNhs11125.1362-25G70.96
thymus, neonate N30.CNhs11132.1393-42G21.05
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.82
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.76
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.09
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A52.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I86.23
whole body, embryo E12.CNhs10587.857-27C95.99
whole body, embryo E13.CNhs10512.372-23H22.39
whole body, embryo E14.5.CNhs10578.420-27D21.46
whole body, embryo E14.CNhs10519.395-14B13.77
whole body, embryo E16.CNhs10514.453-14F22.21
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.50
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.87
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.67
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.15
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.98
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.90
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.66
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.48
whole body, embryo E17.5.CNhs10513.490-9F91.74
whole body, embryo E17.CNhs10517.475-3I56.00
whole body, embryo E18.CNhs10516.493-3B31.87
whole body, neonate N00.CNhs10525.657-19C22.15
whole body, neonate N01.CNhs10576.659-23C61.15
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.26e-1823
neuroblast (sensu Vertebrata)1.26e-1823
neuron9.54e-1633
neuronal stem cell9.54e-1633
neuroblast9.54e-1633
electrically signaling cell9.54e-1633
electrically responsive cell1.40e-1139
electrically active cell1.40e-1139
ectodermal cell8.09e-1144
neurectodermal cell8.09e-1144
neural cell1.46e-1043

Uber anatomy
Ontology termp-valuen
neurectoderm2.93e-1664
neural plate2.93e-1664
presumptive neural plate2.93e-1664
central nervous system1.91e-1473
regional part of nervous system3.31e-1454
nervous system1.36e-1375
ecto-epithelium1.76e-1373
ectoderm-derived structure2.11e-1395
ectoderm2.11e-1395
presumptive ectoderm2.11e-1395
pre-chordal neural plate6.35e-1349
neural tube1.08e-1252
neural rod1.08e-1252
future spinal cord1.08e-1252
neural keel1.08e-1252
gray matter1.54e-1134
regional part of forebrain3.65e-1039
forebrain3.65e-1039
future forebrain3.65e-1039
regional part of brain7.88e-1046
anterior neural tube1.17e-0940
brain2.17e-0947
future brain2.17e-0947
structure with developmental contribution from neural crest2.42e-0992
brain grey matter4.99e-0829
regional part of telencephalon4.99e-0829
telencephalon4.99e-0829
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