FFCP PHASE1:Mm9::chr16:91619231..91619269,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=246738 | |EntrezGene=246738 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1574 | |||
|TSSclassifier=NA | |||
|UniProt=Q8VCE1,D3Z032,E9Q1L7,Q8C4S9 | |UniProt=Q8VCE1,D3Z032,E9Q1L7,Q8C4S9 | ||
|association_with_transcript=0bp_to_ENSMUST00000049244,ENSMUST00000143058,ENSMUST00000169982,NM_001099738,NM_138664,uc007zxs.1,uc007zxt.1_5end | |association_with_transcript=0bp_to_ENSMUST00000049244,ENSMUST00000143058,ENSMUST00000169982,NM_001099738,NM_138664,uc007zxs.1,uc007zxt.1_5end | ||
|cluster_id=chr16:91619231..91619269,- | |||
|description=CAGE_peak_1_at_Dnajc28_5end | |description=CAGE_peak_1_at_Dnajc28_5end | ||
|id=chr16:91619231..91619269,- | |id=chr16:91619231..91619269,- | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!6.20e-12!63;UBERON:0000955!5.29e-11!50;UBERON:0006238!5.29e-11!50;UBERON:0002616!1.43e-10!49;UBERON:0004111!2.25e-09!122;UBERON:0003056!4.52e-09!49;UBERON:0002346!7.36e-09!71;UBERON:0003075!7.36e-09!71;UBERON:0007284!7.36e-09!71;UBERON:0003080!1.30e-08!40;UBERON:0000025!2.22e-08!114;UBERON:0001049!3.42e-08!52;UBERON:0005068!3.42e-08!52;UBERON:0006241!3.42e-08!52;UBERON:0007135!3.42e-08!52;UBERON:0002780!3.69e-08!39;UBERON:0001890!3.69e-08!39;UBERON:0006240!3.69e-08!39;UBERON:0001017!3.49e-07!73;UBERON:0005743!3.49e-07!73;UBERON:0002791!6.26e-07!29;UBERON:0003528!6.26e-07!29;UBERON:0001893!6.26e-07!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,2.44e-11,92;UBERON:0000955,9.90e-10,47;UBERON:0006238,9.90e-10,47;UBERON:0004111,2.33e-09,122;UBERON:0002616,2.58e-09,46;UBERON:0003056,4.46e-09,49;UBERON:0000073,4.70e-09,54;UBERON:0002346,9.57e-09,64;UBERON:0003075,9.57e-09,64;UBERON:0007284,9.57e-09,64;UBERON:0003080,1.28e-08,40;UBERON:0000025,2.29e-08,114;UBERON:0001049,3.38e-08,52;UBERON:0005068,3.38e-08,52;UBERON:0006241,3.38e-08,52;UBERON:0007135,3.38e-08,52;UBERON:0002780,3.65e-08,39;UBERON:0001890,3.65e-08,39;UBERON:0006240,3.65e-08,39;UBERON:0001017,3.57e-07,73;UBERON:0003528,6.20e-07,29;UBERON:0002791,6.20e-07,29;UBERON:0001893,6.20e-07,29;UBERON:0010371,6.51e-07,73 | |||
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| 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| ||
|short_description=p1@Dnajc28 | |short_description=p1@Dnajc28 | ||
}} | }} |
Latest revision as of 20:39, 25 September 2015
Short description: | p1@Dnajc28 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Dnajc28_5end |
Coexpression cluster: | MCL_coexpression_mm9:1574 |
Association with transcript: | 0bp_to_ENSMUST00000049244, ENSMUST00000143058, ENSMUST00000169982, NM_001099738, NM_138664, uc007zxs.1, uc007zxt.1_5end |
EntrezGene: | Dnajc28 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 2.44e-11 | 92 |
brain | 9.90e-10 | 47 |
future brain | 9.90e-10 | 47 |
anatomical conduit | 2.33e-09 | 122 |
regional part of brain | 2.58e-09 | 46 |
pre-chordal neural plate | 4.46e-09 | 49 |
regional part of nervous system | 4.70e-09 | 54 |
neurectoderm | 9.57e-09 | 64 |
neural plate | 9.57e-09 | 64 |
presumptive neural plate | 9.57e-09 | 64 |
anterior neural tube | 1.28e-08 | 40 |
tube | 2.29e-08 | 114 |
neural tube | 3.38e-08 | 52 |
neural rod | 3.38e-08 | 52 |
future spinal cord | 3.38e-08 | 52 |
neural keel | 3.38e-08 | 52 |
regional part of forebrain | 3.65e-08 | 39 |
forebrain | 3.65e-08 | 39 |
future forebrain | 3.65e-08 | 39 |
central nervous system | 3.57e-07 | 73 |
brain grey matter | 6.20e-07 | 29 |
regional part of telencephalon | 6.20e-07 | 29 |
telencephalon | 6.20e-07 | 29 |
ecto-epithelium | 6.51e-07 | 73 |