FFCP PHASE1:Mm9::chr11:8368519..8368548,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=319939 | |EntrezGene=319939 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2000 | |MCL_coexpression_id=2000 | ||
|TSSclassifier=NA | |||
|UniProt=Q5SSZ5 | |UniProt=Q5SSZ5 | ||
|association_with_transcript=-13bp_to_uc007hzj.1_5end | |association_with_transcript=-13bp_to_uc007hzj.1_5end | ||
|cluster_id=chr11:8368519..8368548,- | |||
|description=CAGE_peak_5_at_Tns3_5end | |description=CAGE_peak_5_at_Tns3_5end | ||
|id=chr11:8368519..8368548,- | |id=chr11:8368519..8368548,- | ||
|ontology_enrichment_celltype=CL:0000055!2.58e-19!50;CL:0000221!1.49e-16!44;CL:0000133!1.49e-16!44;CL:0002319!4.13e-16!43;CL:0000393!6.23e-13!39;CL:0000211!6.23e-13!39;CL:0000540!2.39e-10!33;CL:0000047!2.39e-10!33;CL:0000031!2.39e-10!33;CL:0000404!2.39e-10!33;CL:0002321!9.98e-10!70;CL:0000220!9.98e-10!70;CL:0000333!3.07e-07!10;CL:0000095!3.07e-07!10;CL:0000243!3.07e-07!10;CL:0000123!3.07e-07!10;CL:0000125!3.07e-07!10;CL:0000030!3.07e-07!10;CL:0000339!3.07e-07!10 | |ontology_enrichment_celltype=CL:0000055!2.58e-19!50;CL:0000221!1.49e-16!44;CL:0000133!1.49e-16!44;CL:0002319!4.13e-16!43;CL:0000393!6.23e-13!39;CL:0000211!6.23e-13!39;CL:0000540!2.39e-10!33;CL:0000047!2.39e-10!33;CL:0000031!2.39e-10!33;CL:0000404!2.39e-10!33;CL:0002321!9.98e-10!70;CL:0000220!9.98e-10!70;CL:0000333!3.07e-07!10;CL:0000095!3.07e-07!10;CL:0000243!3.07e-07!10;CL:0000123!3.07e-07!10;CL:0000125!3.07e-07!10;CL:0000030!3.07e-07!10;CL:0000339!3.07e-07!10 | ||
|ontology_enrichment_celltype_v019_2=CL:0000221,4.29e-17,44;CL:0000133,4.29e-17,44;CL:0002319,1.25e-16,43;CL:0000393,2.65e-13,39;CL:0000211,2.65e-13,39;CL:0002321,1.02e-11,70;CL:0000540,1.35e-10,33;CL:0000047,1.35e-10,33;CL:0000031,1.35e-10,33;CL:0000404,1.35e-10,33;CL:0000333,1.55e-07,10;CL:0000095,1.55e-07,10;CL:0000243,1.55e-07,10;CL:0000123,1.55e-07,10;CL:0000125,1.55e-07,10;CL:0000030,1.55e-07,10;CL:0000339,1.55e-07,10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!5.81e-23!75;UBERON:0001016!5.81e-23!75;UBERON:0001017!1.19e-21!73;UBERON:0005743!1.19e-21!73;UBERON:0004121!4.41e-21!102;UBERON:0000924!4.41e-21!102;UBERON:0006601!4.41e-21!102;UBERON:0000025!2.75e-17!114;UBERON:0004111!9.79e-17!122;UBERON:0002346!3.78e-14!71;UBERON:0003075!3.78e-14!71;UBERON:0007284!3.78e-14!71;UBERON:0000033!1.23e-13!63;UBERON:0001049!1.70e-13!52;UBERON:0005068!1.70e-13!52;UBERON:0006241!1.70e-13!52;UBERON:0007135!1.70e-13!52;UBERON:0000955!2.06e-13!50;UBERON:0006238!2.06e-13!50;UBERON:0002616!5.39e-13!49;UBERON:0002020!7.33e-10!34;UBERON:0003056!4.96e-09!49;UBERON:0003080!8.28e-09!40;UBERON:0002791!1.89e-08!29;UBERON:0003528!1.89e-08!29;UBERON:0001893!1.89e-08!29;UBERON:0002780!2.31e-08!39;UBERON:0001890!2.31e-08!39;UBERON:0006240!2.31e-08!39;UBERON:0002048!1.38e-07!14;UBERON:0000117!1.38e-07!14;UBERON:0000171!1.38e-07!14;UBERON:0000170!1.38e-07!14;UBERON:0005597!1.38e-07!14;UBERON:0000118!1.38e-07!14;UBERON:0005178!1.48e-07!17;UBERON:0005181!1.48e-07!17;UBERON:0002224!1.48e-07!17;UBERON:0000915!1.48e-07!17;UBERON:0008947!1.48e-07!17;UBERON:0003258!1.48e-07!17 | |ontology_enrichment_uberon=UBERON:0000073!5.81e-23!75;UBERON:0001016!5.81e-23!75;UBERON:0001017!1.19e-21!73;UBERON:0005743!1.19e-21!73;UBERON:0004121!4.41e-21!102;UBERON:0000924!4.41e-21!102;UBERON:0006601!4.41e-21!102;UBERON:0000025!2.75e-17!114;UBERON:0004111!9.79e-17!122;UBERON:0002346!3.78e-14!71;UBERON:0003075!3.78e-14!71;UBERON:0007284!3.78e-14!71;UBERON:0000033!1.23e-13!63;UBERON:0001049!1.70e-13!52;UBERON:0005068!1.70e-13!52;UBERON:0006241!1.70e-13!52;UBERON:0007135!1.70e-13!52;UBERON:0000955!2.06e-13!50;UBERON:0006238!2.06e-13!50;UBERON:0002616!5.39e-13!49;UBERON:0002020!7.33e-10!34;UBERON:0003056!4.96e-09!49;UBERON:0003080!8.28e-09!40;UBERON:0002791!1.89e-08!29;UBERON:0003528!1.89e-08!29;UBERON:0001893!1.89e-08!29;UBERON:0002780!2.31e-08!39;UBERON:0001890!2.31e-08!39;UBERON:0006240!2.31e-08!39;UBERON:0002048!1.38e-07!14;UBERON:0000117!1.38e-07!14;UBERON:0000171!1.38e-07!14;UBERON:0000170!1.38e-07!14;UBERON:0005597!1.38e-07!14;UBERON:0000118!1.38e-07!14;UBERON:0005178!1.48e-07!17;UBERON:0005181!1.48e-07!17;UBERON:0002224!1.48e-07!17;UBERON:0000915!1.48e-07!17;UBERON:0008947!1.48e-07!17;UBERON:0003258!1.48e-07!17 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,7.56e-24,75;UBERON:0001017,1.80e-22,73;UBERON:0004121,1.15e-20,95;UBERON:0000924,1.15e-20,95;UBERON:0006601,1.15e-20,95;UBERON:0010314,8.60e-18,92;UBERON:0000025,1.36e-16,114;UBERON:0004111,2.06e-15,122;UBERON:0000073,3.29e-15,54;UBERON:0002346,3.56e-15,64;UBERON:0003075,3.56e-15,64;UBERON:0007284,3.56e-15,64;UBERON:0001049,4.08e-14,52;UBERON:0005068,4.08e-14,52;UBERON:0006241,4.08e-14,52;UBERON:0007135,4.08e-14,52;UBERON:0010371,7.64e-13,73;UBERON:0000955,2.21e-12,47;UBERON:0006238,2.21e-12,47;UBERON:0002616,5.86e-12,46;UBERON:0002020,2.72e-10,34;UBERON:0003080,3.48e-09,40;UBERON:0003056,4.84e-09,49;UBERON:0003528,8.27e-09,29;UBERON:0002791,8.27e-09,29;UBERON:0001893,8.27e-09,29;UBERON:0002780,1.02e-08,39;UBERON:0001890,1.02e-08,39;UBERON:0006240,1.02e-08,39;UBERON:0005178,1.74e-07,17;UBERON:0005181,1.74e-07,17;UBERON:0002224,1.74e-07,17;UBERON:0000915,1.74e-07,17;UBERON:0008947,1.74e-07,17;UBERON:0003258,1.74e-07,17;UBERON:0002048,1.76e-07,14;UBERON:0000117,1.76e-07,14;UBERON:0000171,1.76e-07,14;UBERON:0000170,1.76e-07,14;UBERON:0005597,1.76e-07,14;UBERON:0000118,1.76e-07,14;UBERON:0000010,7.05e-07,11 | |||
|phase1_expression=2.40223270657191,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,4.84746753861098,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.4422613481683,10.644577778049,1.28482726513177,3.9119567217402,54.2882639387312,31.4151241310295,39.6636994111538,20.2980311356776,23.0004102983955,0,0,0,20.5807548828758,24.9284092746718,29.9089813520917,2.22548106945558,1.05798195854407,0.633831403506179,6.09920157724438,2.66788438833342,1.7997994345628,6.92206453796882,4.9733608046227,8.98800331555214,14.6002956022191,2.90330914463737,6.21027316325777,3.99617426567626,6.85562362569129,9.93908434282261,3.55223317723367,4.02550978276593,7.35375029288017,13.2139057199266,9.06580100404833,11.6740965274745,2.90149833006426,2.56165402086747,2.6045668527838,13.959149950069,10.1297269805702,9.16789486660861,9.42811473515737,5.97961059356232,1.4911955666024,14.6151553133045,12.1670211771925,6.95674772884027,6.88339101585109,0,0,0,0,1.12355536105401,8.52151612890289,5.71529210126311,6.36011234118612,7.46470124816407,12.8326477414318,7.64415719119937,0,2.81438353314578,2.28023878927589,2.52762222507392,1.1418387971906,0,1.1875371125186,1.21439728736295,1.52232739156071,2.30615497256059,2.26083960828934,2.4693628498498,0.753999547978053,10.1349936771093,0.722996784599558,0,2.58826959915855,1.10420759230197,0.484875253135222,0,9.07620470735796,9.00620839297857,0,0,0,0,9.58660092190865,4.57500602818627,2.51308704225729,5.9100268865374,6.13717097592793,8.51930982694196,4.70499662896497,1.62942982160506,1.61729061793121,1.76905930903572,2.52530227063769,0.910843100738926,0.459804208866946,1.80062129805349,2.26057226753573,3.74200745332303,4.09963904911519,3.84177070694888,3.62184719034622,0.646703978798527,1.32374256117473,1.23165786914764,1.7535658594206,1.39023624612799,2.78601733217733,3.2925141825271,0.995171334092466,0,0,0,2.89976081549703,3.04883877975425,3.42117916775928,3.31442629819294,5.70616272067471,5.39934895105824,5.34828072925938,6.70683503499048,4.08678698285093,2.63295759861569,1.64167464079095,1.62137619091711,1.16959989940266,0.878200461164203,1.61047702512446,7.14985825118033,3.49875682089567,0,0.264450566663544,0.426576501070468,0.232236671860439,0.515469845288373,1.00841762311671,0.444756087689741,0.760902504450237,0,0.329397909448022,0.251335208800269,0.397912944082302,0.779856348476481,0,0.432276099749388,0,1.32767530667157,0.685491075658373,1.1270773567308,2.03651327845314,0.387904974335251,1.33258057791605,2.15004226222475,3.24742325555125,2.35498091762062,2.22114895059241,1.48226313543574,1.50160595144485,0.393117990226406,0.224862112384854,0.202860121388503,0.72353147925725,0.25462585178142,0.863088412352432,1.45921704097532,0.549122826376163,2.87536413054709,0.744281895337007,1.24815069245824,1.01031551178845,1.4351793081753,1.92977408545347,9.23765950833023,0.947457058852424,4.72598431681875,6.45031325945715,9.62230017982859,11.7254380209271,9.99783291721258,10.3420833364633,20.1772984455924,26.7972274475018,22.9614866866781,13.109065177259,16.0597033135283,12.729117155173,0,0,0.983528546038072,0.827810238914197,10.2752377592187,9.25972324078405,5.73772308818364,1.76729649043061,6.94118082715765,8.19921363022941,8.18608911384636,11.2315335037699,9.58034298554295,13.0215204162863,8.09621403349789,7.89090816360542,7.11518000303742,7.39039027770156,0.567760340833074,0.712262414669021,1.14020871547503,0.824850614862677,0,1.45668381692989,0.302323556964751,0.188605079755898,0.295301892880773,0.922305443831782,1.29214146584111,1.81766864738753,0.356497378384721,0.316036757935816,0,1.03135543248187,1.36175842301515,1.8006109403131,2.32845630808958,1.71469628025274,1.06404140185364,1.07021290561242,3.1264313914403,2.43571959291679,1.87737366450968,6.99045833850607,1.32317038832977,1.48397627647332,2.09903754704677,1.02531972377865,0.835606408021955,0.656563598980245,0.291480836629851,12.2380699326936,0,1.23832120777933,0.555583582109135,0.376736914009382,0,0,0,0,0,0,1.10717597753397,1.21991680276109,1.18805874903981,1.46361807210128,0.655087691238533,1.34864346384821,0.743881101528023,0.785267825952089,0.648074866458964,1.86401793926078,1.12738587736838,3.73791365109947,1.65458490457098,2.52786544847262,0.774958940866387,2.36538575687089,2.22978753426933,3.77592716047455,3.77493639932559,1.20792060413003,0.864090018773596,0.316011120628178,0.202725215290164,0.513554785824136,0.25984164595559,0.537080087002444,0.198681354781265,0,0.147689527174577,0,0.0762068066549998,0,0,0,0.116876902181569,0.906921534460845,0,0.0897138566094757,0.671538465456314,0.965947970160952,0.93841237725591,0,0.643105137237198,1.00314420807073,5.0827665835536,6.90487854760765,2.29158205375759,4.1244763762485,2.05524755931193,4.5323633843382,1.35004500046361,5.40385443869065,7.25027854374727,2.5888015587591,0.62272408550506,2.39414924040619,1.36586884603307,2.91728060481953,1.88651846365184,2.38996560985018,2.00022055021454,1.85431551515005,1.60459604795908,2.27427490587418,3.04175159868288,2.26351609663291,2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| ||
|short_description=p5@Tns3 | |short_description=p5@Tns3 | ||
}} | }} |
Latest revision as of 20:35, 25 September 2015
Short description: | p5@Tns3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Tns3_5end |
Coexpression cluster: | MCL_coexpression_mm9:2000 |
Association with transcript: | -13bp_to_uc007hzj.1_5end |
EntrezGene: | Tns3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 4.29e-17 | 44 |
neurectodermal cell | 4.29e-17 | 44 |
neural cell | 1.25e-16 | 43 |
electrically responsive cell | 2.65e-13 | 39 |
electrically active cell | 2.65e-13 | 39 |
embryonic cell | 1.02e-11 | 70 |
neuron | 1.35e-10 | 33 |
neuronal stem cell | 1.35e-10 | 33 |
neuroblast | 1.35e-10 | 33 |
electrically signaling cell | 1.35e-10 | 33 |
migratory neural crest cell | 1.55e-07 | 10 |
neuron associated cell | 1.55e-07 | 10 |
glial cell (sensu Vertebrata) | 1.55e-07 | 10 |
neuron associated cell (sensu Vertebrata) | 1.55e-07 | 10 |
glial cell | 1.55e-07 | 10 |
glioblast | 1.55e-07 | 10 |
glioblast (sensu Vertebrata) | 1.55e-07 | 10 |