FFCP PHASE1:Mm9::chr5:23929623..23929666,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=20535 | |EntrezGene=20535 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENSMUST00000153274_5end | |association_with_transcript=0bp_to_ENSMUST00000153274_5end | ||
|cluster_id=chr5:23929623..23929666,+ | |||
|description=CAGE_peak_2_at_Slc4a2_5end | |description=CAGE_peak_2_at_Slc4a2_5end | ||
|id=chr5:23929623..23929666,+ | |id=chr5:23929623..23929666,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000955!3.87e-08!50;UBERON:0006238!3.87e-08!50;UBERON:0000033!4.96e-08!63;UBERON:0001049!5.11e-08!52;UBERON:0005068!5.11e-08!52;UBERON:0006241!5.11e-08!52;UBERON:0007135!5.11e-08!52;UBERON:0002616!1.04e-07!49;UBERON:0004121!1.89e-07!102;UBERON:0000924!1.89e-07!102;UBERON:0006601!1.89e-07!102;UBERON:0001017!3.31e-07!73;UBERON:0005743!3.31e-07!73;UBERON:0003080!9.55e-07!40 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000955,3.41e-08,47;UBERON:0006238,3.41e-08,47;UBERON:0004121,4.06e-08,95;UBERON:0000924,4.06e-08,95;UBERON:0006601,4.06e-08,95;UBERON:0001049,5.11e-08,52;UBERON:0005068,5.11e-08,52;UBERON:0006241,5.11e-08,52;UBERON:0007135,5.11e-08,52;UBERON:0002616,9.29e-08,46;UBERON:0000073,1.03e-07,54;UBERON:0010371,2.00e-07,73;UBERON:0002346,2.79e-07,64;UBERON:0003075,2.79e-07,64;UBERON:0007284,2.79e-07,64;UBERON:0001017,3.31e-07,73;UBERON:0003080,9.55e-07,40 | |||
|phase1_expression=2.88267924788629,2.09385244583617,3.18499467572675,4.83942738090928,4.00716583957078,1.6787927191189,2.33612640595526,4.51931632045517,1.267098499365,1.63845168425395,0.513653904676515,0.398860794976682,6.84802919724823,4.63328132820686,0.999329285446988,2.63217847606774,4.19737126876888,4.88966356305268,3.70208970735495,4.2438965179803,2.63634199468316,2.78014663362479,2.61199789138935,3.99981056983517,4.35877634027623,2.29692785646008,3.4460959692726,1.939241094173,6.27077284206034,3.2763916868791,2.21730510655305,5.71527606113668,4.92051830067656,0,2.02196133825892,2.1610503896604,1.42918549383658,12.9744805528441,10.1573594788094,10.470474879476,17.0587131528994,12.9778642142105,10.1957174136542,4.53228544712078,3.95370031756107,2.75320128242522,5.47673941043627,1.96222640742402,3.73466510648602,3.11087838518853,2.09979632438044,2.87505128729943,2.68452169692378,5.07753499407941,4.03312558970957,2.31533492432352,5.15760191889762,1.54701627683233,3.23706337375356,5.81890077199236,6.33831403506179,3.04960078862219,3.55717918444456,3.5995988691256,10.8775299882367,2.1314403448383,3.59520132622086,3.84218305321555,3.42175720617976,6.21027316325777,5.25812403378455,4.85606673486466,3.09215957332259,4.28717797252339,4.31304619582064,1.83843757322004,9.91042928994498,2.93680877595932,2.76491759861238,6.59431438650969,5.39777097254217,4.16730696445408,5.30447698102624,5.06486349028512,3.66715794664344,3.83017161115768,2.98980529678116,3.72798891650601,2.65041676666144,1.81371744256285,4.63783181922684,0.860423876981386,0,2.69851595818909,1.94932925234301,1.79210754838934,3.65155492342555,2.55645483867087,2.85764605063156,1.7666978725517,2.11265129665021,1.28326477414318,0,0,1.29894624606728,1.77351905832569,1.01104889002957,2.74041311325744,3.36619248741323,3.11728492036132,2.08182392119363,3.04465478312141,4.38169444786511,2.86373017049983,3.29248379979973,2.89033160058254,7.41584903203122,3.61498392299779,0.884610551949874,2.91180329905337,3.09178125844551,4.363877278217,5.59175283654366,4.09893115816166,7.54008144528438,3.32094171771169,3.71426885968353,7.19883277192089,4.44745794755726,6.44099749440738,4.11750542536764,5.52879149296603,4.34560800480691,4.09144731728529,3.74018480207208,3.89379031362618,3.86989582631202,4.35424397135326,5.81262344397452,4.41927897361595,2.34216797332867,3.44853156650209,1.80062129805349,3.0140963567143,4.150226448231,3.97152532883034,4.2165776051878,5.17406741478031,3.23351989399263,1.32374256117473,3.34307135911503,2.41115305670332,3.33656699070717,3.1342694986995,2.88094990971121,2.9855140022774,4.91549231119264,2.57347907114715,1.98914449576915,1.86413195281952,1.87620847984877,1.2604344302271,2.13070262026689,2.16440654922144,2.93107514486019,2.32533944750408,2.95100741539581,2.10177616260905,1.48103864922132,3.2833492815819,2.99954595319666,2.19299981137998,2.41505126820156,4.56301823785264,3.36463917702604,5.14523061896422,4.62586296177317,2.64450566663544,1.70630600428187,4.18026009348789,1.9330119198314,1.4117846723634,1.33426826306922,0.570676878337677,1.42358718463353,3.12928013975621,2.76468729680296,3.58121649674071,1.55971269695296,2.69645822596266,3.8904848977445,8.36393347668342,3.79335801906163,2.05647322697512,1.1270773567308,2.24016460629846,2.71533482034676,2.73529697572242,4.23684798732524,3.69025369949005,3.45397201251025,4.19550357334122,2.37162101669719,2.00214126859313,1.37591296579242,2.02375901146368,2.43432145666204,1.68824011826692,3.05551022137704,2.87696137450811,3.89124544260085,2.47105271869273,4.31304619582064,4.09355042435354,3.43241440426017,2.77836765741823,3.22915344339442,3.85954817090694,4.98833613449833,2.08440552947533,3.09633455239849,2.20668611507745,1.64283173801951,3.85264392116176,4.04674189506223,4.29294025287157,3.31033802623001,4.4292937929755,5.10255259703959,5.57135270033509,3.9717545829156,6.219909519005,13.5712155545345,4.35124547054968,4.42587845717133,4.41498794087572,4.65596710964597,4.57125577709592,2.45902418065013,4.29200576247434,3.15508219416257,1.17131623288992,3.87762115919038,3.82350076724083,3.7875774594007,3.67999490025482,1.61924280669958,3.50707029493574,3.16230222357219,6.10510501201433,4.82596289708113,4.45164009168138,3.4206261464251,3.62934270539578,2.65490276679926,3.39892890616974,2.41858845571801,2.26326095707078,3.83892460745005,1.22974059177571,4.13485269069154,4.36240475373007,2.85197902707777,4.10847785316561,2.10837217149998,2.06271086496374,11.5749465956288,3.42116078659489,5.95049945400671,4.92975180572662,6.56158864476412,5.70780216326626,3.62007845324666,4.87143918583359,2.3467170806371,6.35496212591461,3.96951116498931,3.95727007059552,6.78150592122803,2.77439454669517,3.10368094408155,3.93938159388147,2.62332752966866,4.63563255026274,2.73393409276564,5.15967169908056,3.88908507476395,2.82552685507037,2.32380187125743,2.97411625168479,5.09935289981566,3.63873776041511,3.17859939750175,3.81868247206045,2.21435195506795,1.42323626988794,2.05210147561422,2.29997125615916,4.14888871117737,2.69728692769641,2.89287095038676,2.6175594198403,4.92536898508813,6.83473244395618,1.12738587736838,1.94371509857172,2.15096037594227,3.50012139019286,3.09983576346555,4.05494701177868,5.04636126176742,2.8644964665669,5.13810787685983,2.41584120826006,3.45636007509439,6.00421129193539,1.41907650703115,2.46506297195585,1.81889152168913,2.50637373934474,3.9736270956253,3.4856680360791,4.72606486958647,5.04832249740738,5.63930369246999,3.83139503519994,5.26272555994663,5.29165129021812,10.1682904897965,4.53460767230423,1.10992976687032,1.07656627931371,0.671538465456314,3.67060228661162,4.87974436173073,2.93042598827624,4.07299920250225,4.51414893631827,3.3885110557024,4.14292712856459,1.71868654031819,4.29632955859219,4.7955776383945,4.5323633843382,2.70009000092722,3.60256962579376,4.07828168085784,3.10656187051092,1.45302286617847,1.19707462020309,2.04880326904961,2.67417388775123,1.88651846365184,1.10306105070008,2.66696073361938,3.91466608753899,3.20919209591815,4.29585259998456,2.5347929989024,2.64076877940507,3.183811253976,3.52138338226781,2.92920891673628,6.19181798667996,3.24476112645595,3.08654752741928,2.06042950401653,2.64958056241915,3.77156177623957,2.66213709239006,2.62279808942053,3.0522747492789,3.29382831453657,3.9768865709088,2.56099162021882,3.15683653725411,2.98769050460896,2.80571135828869,2.84724043498018,2.1670986122624,3.27384834535751,3.09873682371932,1.92906610981141,3.99696924700713,2.8071793013449,5.37177635120746,4.59091996965224,3.97064554415128,2.55054619182464 | |phase1_expression=2.88267924788629,2.09385244583617,3.18499467572675,4.83942738090928,4.00716583957078,1.6787927191189,2.33612640595526,4.51931632045517,1.267098499365,1.63845168425395,0.513653904676515,0.398860794976682,6.84802919724823,4.63328132820686,0.999329285446988,2.63217847606774,4.19737126876888,4.88966356305268,3.70208970735495,4.2438965179803,2.63634199468316,2.78014663362479,2.61199789138935,3.99981056983517,4.35877634027623,2.29692785646008,3.4460959692726,1.939241094173,6.27077284206034,3.2763916868791,2.21730510655305,5.71527606113668,4.92051830067656,0,2.02196133825892,2.1610503896604,1.42918549383658,12.9744805528441,10.1573594788094,10.470474879476,17.0587131528994,12.9778642142105,10.1957174136542,4.53228544712078,3.95370031756107,2.75320128242522,5.47673941043627,1.96222640742402,3.73466510648602,3.11087838518853,2.09979632438044,2.87505128729943,2.68452169692378,5.07753499407941,4.03312558970957,2.31533492432352,5.15760191889762,1.54701627683233,3.23706337375356,5.81890077199236,6.33831403506179,3.04960078862219,3.55717918444456,3.5995988691256,10.8775299882367,2.1314403448383,3.59520132622086,3.84218305321555,3.42175720617976,6.21027316325777,5.25812403378455,4.85606673486466,3.09215957332259,4.28717797252339,4.31304619582064,1.83843757322004,9.91042928994498,2.93680877595932,2.76491759861238,6.59431438650969,5.39777097254217,4.16730696445408,5.30447698102624,5.06486349028512,3.66715794664344,3.83017161115768,2.98980529678116,3.72798891650601,2.65041676666144,1.81371744256285,4.63783181922684,0.860423876981386,0,2.69851595818909,1.94932925234301,1.79210754838934,3.65155492342555,2.55645483867087,2.85764605063156,1.7666978725517,2.11265129665021,1.28326477414318,0,0,1.29894624606728,1.77351905832569,1.01104889002957,2.74041311325744,3.36619248741323,3.11728492036132,2.08182392119363,3.04465478312141,4.38169444786511,2.86373017049983,3.29248379979973,2.89033160058254,7.41584903203122,3.61498392299779,0.884610551949874,2.91180329905337,3.09178125844551,4.363877278217,5.59175283654366,4.09893115816166,7.54008144528438,3.32094171771169,3.71426885968353,7.19883277192089,4.44745794755726,6.44099749440738,4.11750542536764,5.52879149296603,4.34560800480691,4.09144731728529,3.74018480207208,3.89379031362618,3.86989582631202,4.35424397135326,5.81262344397452,4.41927897361595,2.34216797332867,3.44853156650209,1.80062129805349,3.0140963567143,4.150226448231,3.97152532883034,4.2165776051878,5.17406741478031,3.23351989399263,1.32374256117473,3.34307135911503,2.41115305670332,3.33656699070717,3.1342694986995,2.88094990971121,2.9855140022774,4.91549231119264,2.57347907114715,1.98914449576915,1.86413195281952,1.87620847984877,1.2604344302271,2.13070262026689,2.16440654922144,2.93107514486019,2.32533944750408,2.95100741539581,2.10177616260905,1.48103864922132,3.2833492815819,2.99954595319666,2.19299981137998,2.41505126820156,4.56301823785264,3.36463917702604,5.14523061896422,4.62586296177317,2.64450566663544,1.70630600428187,4.18026009348789,1.9330119198314,1.4117846723634,1.33426826306922,0.570676878337677,1.42358718463353,3.12928013975621,2.76468729680296,3.58121649674071,1.55971269695296,2.69645822596266,3.8904848977445,8.36393347668342,3.79335801906163,2.05647322697512,1.1270773567308,2.24016460629846,2.71533482034676,2.73529697572242,4.23684798732524,3.69025369949005,3.45397201251025,4.19550357334122,2.37162101669719,2.00214126859313,1.37591296579242,2.02375901146368,2.43432145666204,1.68824011826692,3.05551022137704,2.87696137450811,3.89124544260085,2.47105271869273,4.31304619582064,4.09355042435354,3.43241440426017,2.77836765741823,3.22915344339442,3.85954817090694,4.98833613449833,2.08440552947533,3.09633455239849,2.20668611507745,1.64283173801951,3.85264392116176,4.04674189506223,4.29294025287157,3.31033802623001,4.4292937929755,5.10255259703959,5.57135270033509,3.9717545829156,6.219909519005,13.5712155545345,4.35124547054968,4.42587845717133,4.41498794087572,4.65596710964597,4.57125577709592,2.45902418065013,4.29200576247434,3.15508219416257,1.17131623288992,3.87762115919038,3.82350076724083,3.7875774594007,3.67999490025482,1.61924280669958,3.50707029493574,3.16230222357219,6.10510501201433,4.82596289708113,4.45164009168138,3.4206261464251,3.62934270539578,2.65490276679926,3.39892890616974,2.41858845571801,2.26326095707078,3.83892460745005,1.22974059177571,4.13485269069154,4.36240475373007,2.85197902707777,4.10847785316561,2.10837217149998,2.06271086496374,11.5749465956288,3.42116078659489,5.95049945400671,4.92975180572662,6.56158864476412,5.70780216326626,3.62007845324666,4.87143918583359,2.3467170806371,6.35496212591461,3.96951116498931,3.95727007059552,6.78150592122803,2.77439454669517,3.10368094408155,3.93938159388147,2.62332752966866,4.63563255026274,2.73393409276564,5.15967169908056,3.88908507476395,2.82552685507037,2.32380187125743,2.97411625168479,5.09935289981566,3.63873776041511,3.17859939750175,3.81868247206045,2.21435195506795,1.42323626988794,2.05210147561422,2.29997125615916,4.14888871117737,2.69728692769641,2.89287095038676,2.6175594198403,4.92536898508813,6.83473244395618,1.12738587736838,1.94371509857172,2.15096037594227,3.50012139019286,3.09983576346555,4.05494701177868,5.04636126176742,2.8644964665669,5.13810787685983,2.41584120826006,3.45636007509439,6.00421129193539,1.41907650703115,2.46506297195585,1.81889152168913,2.50637373934474,3.9736270956253,3.4856680360791,4.72606486958647,5.04832249740738,5.63930369246999,3.83139503519994,5.26272555994663,5.29165129021812,10.1682904897965,4.53460767230423,1.10992976687032,1.07656627931371,0.671538465456314,3.67060228661162,4.87974436173073,2.93042598827624,4.07299920250225,4.51414893631827,3.3885110557024,4.14292712856459,1.71868654031819,4.29632955859219,4.7955776383945,4.5323633843382,2.70009000092722,3.60256962579376,4.07828168085784,3.10656187051092,1.45302286617847,1.19707462020309,2.04880326904961,2.67417388775123,1.88651846365184,1.10306105070008,2.66696073361938,3.91466608753899,3.20919209591815,4.29585259998456,2.5347929989024,2.64076877940507,3.183811253976,3.52138338226781,2.92920891673628,6.19181798667996,3.24476112645595,3.08654752741928,2.06042950401653,2.64958056241915,3.77156177623957,2.66213709239006,2.62279808942053,3.0522747492789,3.29382831453657,3.9768865709088,2.56099162021882,3.15683653725411,2.98769050460896,2.80571135828869,2.84724043498018,2.1670986122624,3.27384834535751,3.09873682371932,1.92906610981141,3.99696924700713,2.8071793013449,5.37177635120746,4.59091996965224,3.97064554415128,2.55054619182464 | ||
|short_description=p2@Slc4a2 | |short_description=p2@Slc4a2 | ||
}} | }} |
Latest revision as of 20:35, 25 September 2015
Short description: | p2@Slc4a2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Slc4a2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000153274_5end |
EntrezGene: | Slc4a2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brain | 3.41e-08 | 47 |
future brain | 3.41e-08 | 47 |
ectoderm-derived structure | 4.06e-08 | 95 |
ectoderm | 4.06e-08 | 95 |
presumptive ectoderm | 4.06e-08 | 95 |
neural tube | 5.11e-08 | 52 |
neural rod | 5.11e-08 | 52 |
future spinal cord | 5.11e-08 | 52 |
neural keel | 5.11e-08 | 52 |
regional part of brain | 9.29e-08 | 46 |
regional part of nervous system | 1.03e-07 | 54 |
ecto-epithelium | 2.00e-07 | 73 |
neurectoderm | 2.79e-07 | 64 |
neural plate | 2.79e-07 | 64 |
presumptive neural plate | 2.79e-07 | 64 |
central nervous system | 3.31e-07 | 73 |
anterior neural tube | 9.55e-07 | 40 |