FFCP PHASE1:Mm9::chr19:4510498..4510508,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr19:4510498..4510508,+ to FFCP PHASE1:Mm9::chr19:4510498..4510508,+: NSchange) |
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(6 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=18563 | |EntrezGene=18563 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=E9PW11 | |UniProt=E9PW11 | ||
|association_with_transcript=-13bp_to_ENSMUST00000163318_5end | |||
|cluster_id=chr19:4510498..4510508,+ | |||
|description=CAGE_peak_7_at_Pcx_5end | |||
|id=chr19:4510498..4510508,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!1.45e-12!71;UBERON:0003075!1.45e-12!71;UBERON:0007284!1.45e-12!71;UBERON:0000955!5.35e-11!50;UBERON:0006238!5.35e-11!50;UBERON:0002616!5.68e-11!49;UBERON:0000033!8.58e-11!63;UBERON:0001049!1.87e-10!52;UBERON:0005068!1.87e-10!52;UBERON:0006241!1.87e-10!52;UBERON:0007135!1.87e-10!52;UBERON:0004121!4.73e-10!102;UBERON:0000924!4.73e-10!102;UBERON:0006601!4.73e-10!102;UBERON:0000025!7.29e-09!114;UBERON:0004111!9.92e-09!122;UBERON:0001017!2.13e-08!73;UBERON:0005743!2.13e-08!73;UBERON:0003056!2.40e-08!49;UBERON:0003080!5.31e-08!40;UBERON:0000073!1.20e-07!75;UBERON:0001016!1.20e-07!75;UBERON:0002780!1.79e-07!39;UBERON:0001890!1.79e-07!39;UBERON:0006240!1.79e-07!39;UBERON:0002791!2.38e-07!29;UBERON:0003528!2.38e-07!29;UBERON:0001893!2.38e-07!29;UBERON:0000956!8.04e-07!21;UBERON:0001869!8.04e-07!21;UBERON:0000203!8.04e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000955,4.17e-11,47;UBERON:0006238,4.17e-11,47;UBERON:0002616,4.41e-11,46;UBERON:0001049,2.84e-10,52;UBERON:0005068,2.84e-10,52;UBERON:0006241,2.84e-10,52;UBERON:0007135,2.84e-10,52;UBERON:0000073,3.96e-10,54;UBERON:0002346,9.21e-10,64;UBERON:0003075,9.21e-10,64;UBERON:0007284,9.21e-10,64;UBERON:0010371,3.92e-09,73;UBERON:0001017,2.53e-08,73;UBERON:0003080,4.04e-08,40;UBERON:0003056,4.35e-08,49;UBERON:0010314,8.04e-08,92;UBERON:0004121,9.57e-08,95;UBERON:0000924,9.57e-08,95;UBERON:0006601,9.57e-08,95;UBERON:0003528,1.19e-07,29;UBERON:0002791,1.19e-07,29;UBERON:0001893,1.19e-07,29;UBERON:0002780,1.44e-07,39;UBERON:0001890,1.44e-07,39;UBERON:0006240,1.44e-07,39;UBERON:0001016,1.56e-07,75;UBERON:0000025,1.67e-07,114;UBERON:0000956,3.67e-07,21;UBERON:0001869,3.67e-07,21;UBERON:0000203,3.67e-07,21;UBERON:0004111,4.76e-07,122 | |||
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| ||
|short_description=p7@Pcx | |||
}} | }} |
Latest revision as of 20:28, 25 September 2015
Short description: | p7@Pcx |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Pcx_5end |
Coexpression cluster: | NA |
Association with transcript: | -13bp_to_ENSMUST00000163318_5end |
EntrezGene: | Pcx |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brain | 4.17e-11 | 47 |
future brain | 4.17e-11 | 47 |
regional part of brain | 4.41e-11 | 46 |
neural tube | 2.84e-10 | 52 |
neural rod | 2.84e-10 | 52 |
future spinal cord | 2.84e-10 | 52 |
neural keel | 2.84e-10 | 52 |
regional part of nervous system | 3.96e-10 | 54 |
neurectoderm | 9.21e-10 | 64 |
neural plate | 9.21e-10 | 64 |
presumptive neural plate | 9.21e-10 | 64 |
ecto-epithelium | 3.92e-09 | 73 |
central nervous system | 2.53e-08 | 73 |
anterior neural tube | 4.04e-08 | 40 |
pre-chordal neural plate | 4.35e-08 | 49 |
structure with developmental contribution from neural crest | 8.04e-08 | 92 |
ectoderm-derived structure | 9.57e-08 | 95 |
ectoderm | 9.57e-08 | 95 |
presumptive ectoderm | 9.57e-08 | 95 |
brain grey matter | 1.19e-07 | 29 |
regional part of telencephalon | 1.19e-07 | 29 |
telencephalon | 1.19e-07 | 29 |
regional part of forebrain | 1.44e-07 | 39 |
forebrain | 1.44e-07 | 39 |
future forebrain | 1.44e-07 | 39 |
nervous system | 1.56e-07 | 75 |
tube | 1.67e-07 | 114 |
cerebral cortex | 3.67e-07 | 21 |
cerebral hemisphere | 3.67e-07 | 21 |
pallium | 3.67e-07 | 21 |
anatomical conduit | 4.76e-07 | 122 |