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FFCP PHASE1:Mm9::chr19:4510480..4510487,+: Difference between revisions

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{{FFCP|EntrezGene=18563|HGNC=|MCL_coexpression_id=1|UniProt=E9QPD7,Q3UFS6,Q8BP54,Q3T9S7|association_with_transcript=8bp_to_ENSMUST00000068004,NM_001162946,uc008gaf.2_5end|description=CAGE_peak_8_at_Pcx_5end|id=chr19:4510480..4510487,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!1.16e-15!102;UBERON:0000924!1.16e-15!102;UBERON:0006601!1.16e-15!102;UBERON:0000955!7.15e-15!50;UBERON:0006238!7.15e-15!50;UBERON:0001017!1.10e-14!73;UBERON:0005743!1.10e-14!73;UBERON:0002346!1.55e-14!71;UBERON:0003075!1.55e-14!71;UBERON:0007284!1.55e-14!71;UBERON:0000033!2.75e-14!63;UBERON:0002616!2.84e-14!49;UBERON:0000073!4.76e-14!75;UBERON:0001016!4.76e-14!75;UBERON:0001049!2.93e-13!52;UBERON:0005068!2.93e-13!52;UBERON:0006241!2.93e-13!52;UBERON:0007135!2.93e-13!52;UBERON:0002020!4.78e-12!34;UBERON:0002791!5.25e-12!29;UBERON:0003528!5.25e-12!29;UBERON:0001893!5.25e-12!29;UBERON:0003080!1.29e-10!40;UBERON:0004111!2.82e-10!122;UBERON:0002780!3.91e-10!39;UBERON:0001890!3.91e-10!39;UBERON:0006240!3.91e-10!39;UBERON:0000956!6.08e-10!21;UBERON:0001869!6.08e-10!21;UBERON:0000203!6.08e-10!21;UBERON:0003056!9.58e-10!49;UBERON:0000025!4.22e-09!114;UBERON:0000475!1.08e-08!200;UBERON:0002619!1.13e-08!17;UBERON:0007811!2.07e-07!86;UBERON:0002021!3.54e-07!10;UBERON:0000411!3.54e-07!10;UBERON:0001950!3.54e-07!10;UBERON:0000153!9.06e-07!94|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.38e-18,54;UBERON:0001049,1.00e-15,52;UBERON:0005068,1.00e-15,52;UBERON:0006241,1.00e-15,52;UBERON:0007135,1.00e-15,52;UBERON:0000955,1.94e-15,47;UBERON:0006238,1.94e-15,47;UBERON:0001017,8.69e-15,73;UBERON:0002616,2.26e-14,46;UBERON:0001016,3.79e-14,75;UBERON:0004121,5.24e-14,95;UBERON:0000924,5.24e-14,95;UBERON:0006601,5.24e-14,95;UBERON:0002346,2.03e-12,64;UBERON:0003075,2.03e-12,64;UBERON:0007284,2.03e-12,64;UBERON:0010371,4.37e-12,73;UBERON:0002020,4.64e-11,34;UBERON:0003528,9.96e-11,29;UBERON:0002791,9.96e-11,29;UBERON:0001893,9.96e-11,29;UBERON:0002021,2.20e-10,10;UBERON:0000411,2.20e-10,10;UBERON:0001950,2.20e-10,10;UBERON:0003080,4.17e-10,40;UBERON:0010314,5.31e-10,92;UBERON:0004111,2.66e-09,122;UBERON:0002780,2.76e-09,39;UBERON:0001890,2.76e-09,39;UBERON:0006240,2.76e-09,39;UBERON:0000956,6.36e-09,21;UBERON:0001869,6.36e-09,21;UBERON:0000203,6.36e-09,21;UBERON:0000025,1.73e-08,114;UBERON:0002619,2.32e-08,17;UBERON:0003056,2.91e-08,49;UBERON:0003076,6.35e-07,12;UBERON:0003057,6.35e-07,12|phase1_expression=0.640595388419176,0.348975407639361,0,0,0,0,0,0,0,0,0,0,0.513602189793617,0.0874204024189974,0,0,0,0,0,0,0.510259740906419,0.198581902401771,0.261199789138935,0,0.68822784320151,0,0,0,0.190023419456374,0.504060259519861,0,0,1.23012957516914,0,0,0,0,0,0,0,0,0,0,1.00717454380462,0.506884656097573,0,0,1.09012578190223,1.31811709640683,0.388859798148567,0.699932108126813,4.31257693094915,0,0.725362142011344,0,0,1.14613375975503,0,0.404632921719196,0.528990979272033,0.633831403506179,0.677689064138264,0,0,0,0,0.299600110518405,0.768436610643109,0.622137673850866,0.675029691658453,1.05162480675691,1.71390590642282,1.32521124570968,0.979926393719632,0.766763768145891,0.919218786610021,4.40463523997555,2.68143409978894,1.84327839907492,0.527545150920775,0.274462930807229,0.52091337055676,3.90856198601933,1.12552522006336,1.83357897332172,0,0.284743361598206,0.931997229126503,0.151452386666368,0.226714680320357,0,0,2.03991400112325,0.539703191637817,1.94932925234301,1.34408066129201,1.12355536105401,0.340860645156116,0.519572009205738,0.35333957451034,0,1.28326477414318,0,0,0,0.253359865475099,0.505524445014783,0.68510327831436,0,0.742210695324124,0.520455980298408,0.608930956624282,1.15307748628029,0.60289056221049,0.470354828542819,1.50799909595611,0,1.44599356919912,0,0,0.220841518460394,0,0,1.75668478206928,2.30391377494801,0.255457055208591,0.11981512450592,0,0,1.49790639404823,1.83000241127451,0.628271760564322,1.73824320192276,1.53429274398198,2.90903262383384,2.59586020908412,0.101839363850316,0.124406970610093,0.758168275301024,1.47309299120532,0.130120442962704,0.459804208866946,0.180062129805349,0.30140963567143,0.0680364991513279,0.512454881139399,0.374806898238915,0.517406741478031,0.431135985865684,0.378212160335639,0.351902248327898,0.43839146485515,0.278047249225598,0,0.411564272815887,0,0,0.257347907114715,0,0.621377317606506,0.469052119962192,0,0.710234206755631,0.393528463494808,0.462801338662135,0.232533944750408,0.268273401399619,0.583826711835847,0.329119699826961,0,0.324275238183423,0.438599962275997,0.658650345873152,1.20785776884335,3.36463917702604,0.411618449517138,0.330418782983798,0,0,0.464473343720877,0,0.201683524623343,0,0.380451252225118,0,0,0,0,0,0,0.216138049874694,0.597423819763102,0.948339504765408,0.456994050438915,0,0.203651327845314,0.193952487167626,0.210407459670956,0.316182685621286,0.738050739898011,0.627994911365499,0.370191491765402,0.592905254174298,0.333690211432188,0.393117990226406,0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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=18563
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=E9QPD7,Q3UFS6,Q8BP54,Q3T9S7
|association_with_transcript=8bp_to_ENSMUST00000068004,NM_001162946,uc008gaf.2_5end
|cluster_id=chr19:4510480..4510487,+
|description=CAGE_peak_8_at_Pcx_5end
|id=chr19:4510480..4510487,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!1.16e-15!102;UBERON:0000924!1.16e-15!102;UBERON:0006601!1.16e-15!102;UBERON:0000955!7.15e-15!50;UBERON:0006238!7.15e-15!50;UBERON:0001017!1.10e-14!73;UBERON:0005743!1.10e-14!73;UBERON:0002346!1.55e-14!71;UBERON:0003075!1.55e-14!71;UBERON:0007284!1.55e-14!71;UBERON:0000033!2.75e-14!63;UBERON:0002616!2.84e-14!49;UBERON:0000073!4.76e-14!75;UBERON:0001016!4.76e-14!75;UBERON:0001049!2.93e-13!52;UBERON:0005068!2.93e-13!52;UBERON:0006241!2.93e-13!52;UBERON:0007135!2.93e-13!52;UBERON:0002020!4.78e-12!34;UBERON:0002791!5.25e-12!29;UBERON:0003528!5.25e-12!29;UBERON:0001893!5.25e-12!29;UBERON:0003080!1.29e-10!40;UBERON:0004111!2.82e-10!122;UBERON:0002780!3.91e-10!39;UBERON:0001890!3.91e-10!39;UBERON:0006240!3.91e-10!39;UBERON:0000956!6.08e-10!21;UBERON:0001869!6.08e-10!21;UBERON:0000203!6.08e-10!21;UBERON:0003056!9.58e-10!49;UBERON:0000025!4.22e-09!114;UBERON:0000475!1.08e-08!200;UBERON:0002619!1.13e-08!17;UBERON:0007811!2.07e-07!86;UBERON:0002021!3.54e-07!10;UBERON:0000411!3.54e-07!10;UBERON:0001950!3.54e-07!10;UBERON:0000153!9.06e-07!94
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.38e-18,54;UBERON:0001049,1.00e-15,52;UBERON:0005068,1.00e-15,52;UBERON:0006241,1.00e-15,52;UBERON:0007135,1.00e-15,52;UBERON:0000955,1.94e-15,47;UBERON:0006238,1.94e-15,47;UBERON:0001017,8.69e-15,73;UBERON:0002616,2.26e-14,46;UBERON:0001016,3.79e-14,75;UBERON:0004121,5.24e-14,95;UBERON:0000924,5.24e-14,95;UBERON:0006601,5.24e-14,95;UBERON:0002346,2.03e-12,64;UBERON:0003075,2.03e-12,64;UBERON:0007284,2.03e-12,64;UBERON:0010371,4.37e-12,73;UBERON:0002020,4.64e-11,34;UBERON:0003528,9.96e-11,29;UBERON:0002791,9.96e-11,29;UBERON:0001893,9.96e-11,29;UBERON:0002021,2.20e-10,10;UBERON:0000411,2.20e-10,10;UBERON:0001950,2.20e-10,10;UBERON:0003080,4.17e-10,40;UBERON:0010314,5.31e-10,92;UBERON:0004111,2.66e-09,122;UBERON:0002780,2.76e-09,39;UBERON:0001890,2.76e-09,39;UBERON:0006240,2.76e-09,39;UBERON:0000956,6.36e-09,21;UBERON:0001869,6.36e-09,21;UBERON:0000203,6.36e-09,21;UBERON:0000025,1.73e-08,114;UBERON:0002619,2.32e-08,17;UBERON:0003056,2.91e-08,49;UBERON:0003076,6.35e-07,12;UBERON:0003057,6.35e-07,12
|phase1_expression=0.640595388419176,0.348975407639361,0,0,0,0,0,0,0,0,0,0,0.513602189793617,0.0874204024189974,0,0,0,0,0,0,0.510259740906419,0.198581902401771,0.261199789138935,0,0.68822784320151,0,0,0,0.190023419456374,0.504060259519861,0,0,1.23012957516914,0,0,0,0,0,0,0,0,0,0,1.00717454380462,0.506884656097573,0,0,1.09012578190223,1.31811709640683,0.388859798148567,0.699932108126813,4.31257693094915,0,0.725362142011344,0,0,1.14613375975503,0,0.404632921719196,0.528990979272033,0.633831403506179,0.677689064138264,0,0,0,0,0.299600110518405,0.768436610643109,0.622137673850866,0.675029691658453,1.05162480675691,1.71390590642282,1.32521124570968,0.979926393719632,0.766763768145891,0.919218786610021,4.40463523997555,2.68143409978894,1.84327839907492,0.527545150920775,0.274462930807229,0.52091337055676,3.90856198601933,1.12552522006336,1.83357897332172,0,0.284743361598206,0.931997229126503,0.151452386666368,0.226714680320357,0,0,2.03991400112325,0.539703191637817,1.94932925234301,1.34408066129201,1.12355536105401,0.340860645156116,0.519572009205738,0.35333957451034,0,1.28326477414318,0,0,0,0.253359865475099,0.505524445014783,0.68510327831436,0,0.742210695324124,0.520455980298408,0.608930956624282,1.15307748628029,0.60289056221049,0.470354828542819,1.50799909595611,0,1.44599356919912,0,0,0.220841518460394,0,0,1.75668478206928,2.30391377494801,0.255457055208591,0.11981512450592,0,0,1.49790639404823,1.83000241127451,0.628271760564322,1.73824320192276,1.53429274398198,2.90903262383384,2.59586020908412,0.101839363850316,0.124406970610093,0.758168275301024,1.47309299120532,0.130120442962704,0.459804208866946,0.180062129805349,0.30140963567143,0.0680364991513279,0.512454881139399,0.374806898238915,0.517406741478031,0.431135985865684,0.378212160335639,0.351902248327898,0.43839146485515,0.278047249225598,0,0.411564272815887,0,0,0.257347907114715,0,0.621377317606506,0.469052119962192,0,0.710234206755631,0.393528463494808,0.462801338662135,0.232533944750408,0.268273401399619,0.583826711835847,0.329119699826961,0,0.324275238183423,0.438599962275997,0.658650345873152,1.20785776884335,3.36463917702604,0.411618449517138,0.330418782983798,0,0,0.464473343720877,0,0.201683524623343,0,0.380451252225118,0,0,0,0,0,0,0.216138049874694,0.597423819763102,0.948339504765408,0.456994050438915,0,0.203651327845314,0.193952487167626,0.210407459670956,0.316182685621286,0.738050739898011,0.627994911365499,0.370191491765402,0.592905254174298,0.333690211432188,0.393117990226406,0.674586337154561,0.202860121388503,0.72353147925725,0.50925170356284,0,0.162135226775035,0,0,0,0.936113019343682,0.505157755894224,1.25578189465339,1.4473305640901,0.184753190166605,0.37898282354097,0.325929952884052,0.509235257325564,0.469380496577004,0.167506257441816,0,0,0.157635144106191,0,0,0.491589944147214,0.345369963731791,0.144649058581512,0,0,2.45882136509518,1.93155722413313,1.9266070798535,3.16471553798949,0.163934945376675,1.76729649043061,0.631016438832513,0.390438744296638,0.430846795465598,0,0.222798674082394,0.283076530788832,0,0.292255857911312,0,2.24924921495265,0.283880170416537,0.534196811001766,0.162886959353576,0.164970122972535,0,0.485561272309963,0.604647113929502,1.13163047853539,0.590603785761546,0.614870295887855,1.03371317267288,1.09060118843252,1.06949213515416,1.58018378967908,1.05418608574999,1.03135543248187,0.340439605753788,0.540183282093931,0.258717367565509,0,0,0.178368817602071,0.164549020602121,0.608929898229199,0,0.21183207086382,0.661585194164886,0.16488625294148,0.161464426695906,0.241251699712623,0.358117032009409,0.492422699235184,0.874442509889552,1.29797711407357,0,0.206386867963223,0.370389054739423,0.376736914009382,0.820165366326151,0,0,0.279902904647316,0,0,0.474503990371703,0.203319467126849,0.324016022465404,0.209088296014469,0.436725127492355,0.539457385539283,0.0826534557253359,0.785267825952089,0.259229946583586,1.24267862617385,0.56369293868419,0.448549638131936,0.330916980914195,0.388902376688095,0.258319646955462,0.168956125490778,0.234714477291508,0.39061315453185,1.25831213310853,0.483168241652012,0.288030006257865,0,1.21635129174099,0.308132871494482,0.129920822977795,0.358053391334963,0.198681354781265,0.120195449519969,0.590758108698309,0.100966449948148,0,0,0,0,0.116876902181569,1.36038230169127,0.221985953374065,0,0,0.19318959403219,0,0,0.643105137237198,1.00314420807073,2.82375921308533,0.920650473014354,2.86447756719698,1.71853182343688,2.05524755931193,3.7769694869485,4.05013500139084,0.900642406448441,3.17199686288943,3.62432218226274,0,0,0.341467211508268,0.729320151204882,0.209613162627982,0.367687016900028,0,0.206035057238894,0.320919209591815,0,0.25347929989024,0.377252682772152,0.561849044819294,0.192075457214608,0.402048282689293,0.476293691283074,0.579421629724277,0,0,0.147198920134397,0.342869252385415,0.177475806159338,0,0.436039249896986,0.282328141245992,0.338458431566706,0.914639864363863,0.263069711437843,0.407412341537585,0.561142271657738,0.355905054372522,0.788035859004508,0.409231043169689,0.619747364743864,0.578719832943424,0.249810577937946,0.233931608445408,0,0.191288332068843,0.220591419119515,0
|short_description=p8@Pcx
}}

Latest revision as of 20:28, 25 September 2015

Short description:p8@Pcx
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_8_at_Pcx_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 8bp_to_ENSMUST00000068004, NM_001162946, uc008gaf.2_5end
EntrezGene:Pcx
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p8@Pcx

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.51
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.51
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.20
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.69
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.50
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.01
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.51
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.09
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.32
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.70
Mouse Astrocytes, donor3.CNhs12107.11633-122C44.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.15
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.40
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.62
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.68
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.05
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.33
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.98
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.77
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.68
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.84
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.53
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.27
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.91
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.83
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.93
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.04
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.95
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.34
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.12
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.69
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.74
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I11.15
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I31.51
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H11.45
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.76
cerebellum, neonate N30.CNhs11135.1395-42I22.30
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.50
corpus striatum, adult.CNhs10487.19-21D81.83
corpus striatum, neonate N00.CNhs11226.630-43F10.63
cortex, adult.CNhs10473.12-14D51.74
cortex, neonate N30.CNhs11107.1392-42F21.53
diencephalon, adult.CNhs10482.20-12F22.91
diencephalon, neonate N30.CNhs11201.1388-42B22.60
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G41.47
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.07
eyeball, neonate N01.CNhs11140.1532-43E70.51
eyeball, neonate N02.CNhs11205.1551-44G80.37
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.58
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.32
heart, neonate N20.CNhs11127.821-26I60.44
heart, neonate N25.CNhs11196.1351-25D30.66
heart, neonate N30.CNhs11202.1390-42D21.21
hippocampus, adult.CNhs10478.13-16E83.36
hippocampus, neonate N00.CNhs11228.627-43G10.41
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I90.95
kidney, embryo E15.CNhs10997.434-16F80.46
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D50.32
kidney, neonate N20.CNhs11113.832-19I10.74
kidney, neonate N25.CNhs11122.1353-25F30.63
kidney, neonate N30.CNhs11203.1385-42H10.37
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.67
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.72
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.94
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H11.26
liver, neonate N30.CNhs11106.1382-42D11.45
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.49
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B62.46
mammary gland, adult pregnant day19.CNhs10476.588-5H21.93
medulla oblongata, adult.CNhs10477.17-12C21.93
medulla oblongata, neonate N30.CNhs11200.1396-42A33.16
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.77
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I92.25
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E51.13
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G91.03
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B61.58
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.24
skin, neonate N06.CNhs11097.693-20I50.36
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C91.30
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.82
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.54
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.39
testis, neonate N10.CNhs11204.763-44D91.26
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I41.22
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.59
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B41.36
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.64
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.82
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.86
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.72
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.78
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.05
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.17
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.62
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.40
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.00
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system3.38e-1854
neural tube1.00e-1552
neural rod1.00e-1552
future spinal cord1.00e-1552
neural keel1.00e-1552
brain1.94e-1547
future brain1.94e-1547
central nervous system8.69e-1573
regional part of brain2.26e-1446
nervous system3.79e-1475
ectoderm-derived structure5.24e-1495
ectoderm5.24e-1495
presumptive ectoderm5.24e-1495
neurectoderm2.03e-1264
neural plate2.03e-1264
presumptive neural plate2.03e-1264
ecto-epithelium4.37e-1273
gray matter4.64e-1134
brain grey matter9.96e-1129
regional part of telencephalon9.96e-1129
telencephalon9.96e-1129
occipital lobe2.20e-1010
visual cortex2.20e-1010
neocortex2.20e-1010
anterior neural tube4.17e-1040
structure with developmental contribution from neural crest5.31e-1092
anatomical conduit2.66e-09122
regional part of forebrain2.76e-0939
forebrain2.76e-0939
future forebrain2.76e-0939
cerebral cortex6.36e-0921
cerebral hemisphere6.36e-0921
pallium6.36e-0921
tube1.73e-08114
regional part of cerebral cortex2.32e-0817
pre-chordal neural plate2.91e-0849
posterior neural tube6.35e-0712
chordal neural plate6.35e-0712
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