FFCP PHASE1:Mm9::chr3:89049751..89049821,-: Difference between revisions
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{{FFCP|EntrezGene=360213|HGNC=|MCL_coexpression_id=13|UniProt=Q7TNM2,E9PUI3|association_with_transcript=0bp_to_ENSMUST00000041022,ENSMUST00000143637,NM_183037,uc008pyk.1_5end|description=CAGE_peak_1_at_Trim46_5end|id=chr3:89049751..89049821,-|ontology_enrichment_celltype=CL:0002319!1.46e-15!43;CL:0000221!3.56e-15!44;CL:0000133!3.56e-15!44;CL:0000055!6.13e-15!50;CL:0000393!2.08e-14!39;CL:0000211!2.08e-14!39;CL:0000540!2.91e-14!33;CL:0000047!2.91e-14!33;CL:0000031!2.91e-14!33;CL:0000404!2.91e-14!33;CL:0000117!1.21e-13!23;CL:0000337!1.21e-13!23|ontology_enrichment_celltype_v019_2=CL:0002319,2.16e-17,43;CL:0000221,1.46e-16,44;CL:0000133,1.46e-16,44;CL:0000540,3.37e-16,33;CL:0000047,3.37e-16,33;CL:0000031,3.37e-16,33;CL:0000404,3.37e-16,33;CL:0000393,6.80e-16,39;CL:0000211,6.80e-16,39;CL:0000117,1.75e-15,23;CL:0000337,1.75e-15,23;CL:0002321,4.34e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.89e-33!73;UBERON:0005743!1.89e-33!73;UBERON:0000073!7.68e-33!75;UBERON:0001016!7.68e-33!75;UBERON:0001049!2.16e-26!52;UBERON:0005068!2.16e-26!52;UBERON:0006241!2.16e-26!52;UBERON:0007135!2.16e-26!52;UBERON:0004121!2.38e-25!102;UBERON:0000924!2.38e-25!102;UBERON:0006601!2.38e-25!102;UBERON:0000955!5.36e-25!50;UBERON:0006238!5.36e-25!50;UBERON:0002346!1.79e-24!71;UBERON:0003075!1.79e-24!71;UBERON:0007284!1.79e-24!71;UBERON:0002616!2.47e-24!49;UBERON:0000033!1.70e-22!63;UBERON:0002020!8.79e-21!34;UBERON:0003080!2.54e-20!40;UBERON:0002780!9.16e-20!39;UBERON:0001890!9.16e-20!39;UBERON:0006240!9.16e-20!39;UBERON:0003056!1.31e-19!49;UBERON:0002791!9.50e-18!29;UBERON:0003528!9.50e-18!29;UBERON:0001893!9.50e-18!29;UBERON:0000956!6.44e-13!21;UBERON:0001869!6.44e-13!21;UBERON:0000203!6.44e-13!21;UBERON:0002619!4.42e-11!17;UBERON:0000153!1.54e-10!94;UBERON:0007811!4.52e-10!86;UBERON:0002021!9.74e-08!10;UBERON:0000411!9.74e-08!10;UBERON:0001950!9.74e-08!10|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.44e-38,73;UBERON:0001016,2.84e-37,75;UBERON:0000073,1.38e-31,54;UBERON:0001049,3.42e-30,52;UBERON:0005068,3.42e-30,52;UBERON:0006241,3.42e-30,52;UBERON:0007135,3.42e-30,52;UBERON:0002346,5.55e-30,64;UBERON:0003075,5.55e-30,64;UBERON:0007284,5.55e-30,64;UBERON:0004121,7.47e-29,95;UBERON:0000924,7.47e-29,95;UBERON:0006601,7.47e-29,95;UBERON:0000955,1.24e-26,47;UBERON:0006238,1.24e-26,47;UBERON:0002616,7.05e-26,46;UBERON:0002020,1.02e-23,34;UBERON:0003080,3.47e-23,40;UBERON:0010371,3.88e-23,73;UBERON:0002780,1.52e-22,39;UBERON:0001890,1.52e-22,39;UBERON:0006240,1.52e-22,39;UBERON:0003056,4.31e-22,49;UBERON:0003528,3.22e-20,29;UBERON:0002791,3.22e-20,29;UBERON:0001893,3.22e-20,29;UBERON:0010314,5.90e-17,92;UBERON:0000956,1.20e-14,21;UBERON:0001869,1.20e-14,21;UBERON:0000203,1.20e-14,21;UBERON:0002619,1.56e-12,17;UBERON:0002021,1.11e-08,10;UBERON:0000411,1.11e-08,10;UBERON:0001950,1.11e-08,10;UBERON:0003076,2.21e-07,12;UBERON:0003057,2.21e-07,12;UBERON:0002420,9.54e-07,8;UBERON:0007245,9.54e-07,8;UBERON:0010009,9.54e-07,8;UBERON:0010011,9.54e-07,8;UBERON:0000454,9.54e-07,8|phase1_expression=1.12104192973356,0,0,0,0,0,0,1.80772652818207,0.140788722151667,0,0,0,0.171200729931206,0.0874204024189974,0,0,0,0.315462165358238,0.411343300817216,0,6.97354979238772,0.496454756004426,3.39559725880616,0,0,0.57423196411502,0,0.215471232685889,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,1.51076181570693,0.811015449756117,2.38610777810186,2.34717403304412,3.92445281484804,7.0299578475031,6.22175677037707,2.65974201088189,2.87505128729943,0,0,0.672187598284928,2.31533492432352,6.87680255853016,2.57836046138721,28.1219880594841,44.4352422588508,40.5652098243955,1.69422266034566,0.889294796111139,1.3498495759221,2.96659908770092,1.4209602298922,3.89480143673926,6.91592949578798,7.56934169851887,12.1505344498522,7.15104868594699,19.9955689082663,22.307722636113,13.229006315215,16.3895755441184,17.4651569455904,14.3150645299205,15.0671058940522,15.3606533256243,36.1368428380731,44.2800195035663,34.3802824567462,15.0758819460746,9.00420176050688,14.0574387954665,31.2306300602088,26.0540175862358,28.3327157654457,0.605809546665472,1.51143120213571,1.15945795480671,0,0,0,0,0,1.40444420131752,3.91989741929533,3.63700406444016,5.3000936176551,0.704217098883403,0,0,0,0.216491041011214,0,0.505524445014783,0.11418387971906,0.258937883647172,0.593768556259299,1.38788261412909,0.913396434936424,2.30615497256059,0.904335843315735,1.17588707135705,0.251333182659351,1.23597483867187,1.3013942122792,0,0.647067399789637,0.441683036920787,0,0,10.8328894894272,12.1479089951804,0.766371165625774,0.11981512450592,0,0,16.3271796951257,37.0575488283087,39.2041578592137,30.5930803538407,43.2159122888259,21.4021685896347,26.76980840618,0.101839363850316,1.36847667671102,0,1.47309299120532,0.520481771850815,1.37941262660084,2.16074555766419,1.9591626318643,2.10913147369116,2.0498195245576,2.90475346135159,2.84573707812917,0.862271971731369,2.26927296201383,2.81521798662318,3.5071317188412,1.94633074457919,2.089512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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=360213 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt=Q7TNM2,E9PUI3 | |||
|association_with_transcript=0bp_to_ENSMUST00000041022,ENSMUST00000143637,NM_183037,uc008pyk.1_5end | |||
|cluster_id=chr3:89049751..89049821,- | |||
|description=CAGE_peak_1_at_Trim46_5end | |||
|id=chr3:89049751..89049821,- | |||
|ontology_enrichment_celltype=CL:0002319!1.46e-15!43;CL:0000221!3.56e-15!44;CL:0000133!3.56e-15!44;CL:0000055!6.13e-15!50;CL:0000393!2.08e-14!39;CL:0000211!2.08e-14!39;CL:0000540!2.91e-14!33;CL:0000047!2.91e-14!33;CL:0000031!2.91e-14!33;CL:0000404!2.91e-14!33;CL:0000117!1.21e-13!23;CL:0000337!1.21e-13!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,2.16e-17,43;CL:0000221,1.46e-16,44;CL:0000133,1.46e-16,44;CL:0000540,3.37e-16,33;CL:0000047,3.37e-16,33;CL:0000031,3.37e-16,33;CL:0000404,3.37e-16,33;CL:0000393,6.80e-16,39;CL:0000211,6.80e-16,39;CL:0000117,1.75e-15,23;CL:0000337,1.75e-15,23;CL:0002321,4.34e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.89e-33!73;UBERON:0005743!1.89e-33!73;UBERON:0000073!7.68e-33!75;UBERON:0001016!7.68e-33!75;UBERON:0001049!2.16e-26!52;UBERON:0005068!2.16e-26!52;UBERON:0006241!2.16e-26!52;UBERON:0007135!2.16e-26!52;UBERON:0004121!2.38e-25!102;UBERON:0000924!2.38e-25!102;UBERON:0006601!2.38e-25!102;UBERON:0000955!5.36e-25!50;UBERON:0006238!5.36e-25!50;UBERON:0002346!1.79e-24!71;UBERON:0003075!1.79e-24!71;UBERON:0007284!1.79e-24!71;UBERON:0002616!2.47e-24!49;UBERON:0000033!1.70e-22!63;UBERON:0002020!8.79e-21!34;UBERON:0003080!2.54e-20!40;UBERON:0002780!9.16e-20!39;UBERON:0001890!9.16e-20!39;UBERON:0006240!9.16e-20!39;UBERON:0003056!1.31e-19!49;UBERON:0002791!9.50e-18!29;UBERON:0003528!9.50e-18!29;UBERON:0001893!9.50e-18!29;UBERON:0000956!6.44e-13!21;UBERON:0001869!6.44e-13!21;UBERON:0000203!6.44e-13!21;UBERON:0002619!4.42e-11!17;UBERON:0000153!1.54e-10!94;UBERON:0007811!4.52e-10!86;UBERON:0002021!9.74e-08!10;UBERON:0000411!9.74e-08!10;UBERON:0001950!9.74e-08!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.44e-38,73;UBERON:0001016,2.84e-37,75;UBERON:0000073,1.38e-31,54;UBERON:0001049,3.42e-30,52;UBERON:0005068,3.42e-30,52;UBERON:0006241,3.42e-30,52;UBERON:0007135,3.42e-30,52;UBERON:0002346,5.55e-30,64;UBERON:0003075,5.55e-30,64;UBERON:0007284,5.55e-30,64;UBERON:0004121,7.47e-29,95;UBERON:0000924,7.47e-29,95;UBERON:0006601,7.47e-29,95;UBERON:0000955,1.24e-26,47;UBERON:0006238,1.24e-26,47;UBERON:0002616,7.05e-26,46;UBERON:0002020,1.02e-23,34;UBERON:0003080,3.47e-23,40;UBERON:0010371,3.88e-23,73;UBERON:0002780,1.52e-22,39;UBERON:0001890,1.52e-22,39;UBERON:0006240,1.52e-22,39;UBERON:0003056,4.31e-22,49;UBERON:0003528,3.22e-20,29;UBERON:0002791,3.22e-20,29;UBERON:0001893,3.22e-20,29;UBERON:0010314,5.90e-17,92;UBERON:0000956,1.20e-14,21;UBERON:0001869,1.20e-14,21;UBERON:0000203,1.20e-14,21;UBERON:0002619,1.56e-12,17;UBERON:0002021,1.11e-08,10;UBERON:0000411,1.11e-08,10;UBERON:0001950,1.11e-08,10;UBERON:0003076,2.21e-07,12;UBERON:0003057,2.21e-07,12;UBERON:0002420,9.54e-07,8;UBERON:0007245,9.54e-07,8;UBERON:0010009,9.54e-07,8;UBERON:0010011,9.54e-07,8;UBERON:0000454,9.54e-07,8 | |||
|phase1_expression=1.12104192973356,0,0,0,0,0,0,1.80772652818207,0.140788722151667,0,0,0,0.171200729931206,0.0874204024189974,0,0,0,0.315462165358238,0.411343300817216,0,6.97354979238772,0.496454756004426,3.39559725880616,0,0,0.57423196411502,0,0.215471232685889,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,1.51076181570693,0.811015449756117,2.38610777810186,2.34717403304412,3.92445281484804,7.0299578475031,6.22175677037707,2.65974201088189,2.87505128729943,0,0,0.672187598284928,2.31533492432352,6.87680255853016,2.57836046138721,28.1219880594841,44.4352422588508,40.5652098243955,1.69422266034566,0.889294796111139,1.3498495759221,2.96659908770092,1.4209602298922,3.89480143673926,6.91592949578798,7.56934169851887,12.1505344498522,7.15104868594699,19.9955689082663,22.307722636113,13.229006315215,16.3895755441184,17.4651569455904,14.3150645299205,15.0671058940522,15.3606533256243,36.1368428380731,44.2800195035663,34.3802824567462,15.0758819460746,9.00420176050688,14.0574387954665,31.2306300602088,26.0540175862358,28.3327157654457,0.605809546665472,1.51143120213571,1.15945795480671,0,0,0,0,0,1.40444420131752,3.91989741929533,3.63700406444016,5.3000936176551,0.704217098883403,0,0,0,0.216491041011214,0,0.505524445014783,0.11418387971906,0.258937883647172,0.593768556259299,1.38788261412909,0.913396434936424,2.30615497256059,0.904335843315735,1.17588707135705,0.251333182659351,1.23597483867187,1.3013942122792,0,0.647067399789637,0.441683036920787,0,0,10.8328894894272,12.1479089951804,0.766371165625774,0.11981512450592,0,0,16.3271796951257,37.0575488283087,39.2041578592137,30.5930803538407,43.2159122888259,21.4021685896347,26.76980840618,0.101839363850316,1.36847667671102,0,1.47309299120532,0.520481771850815,1.37941262660084,2.16074555766419,1.9591626318643,2.10913147369116,2.0498195245576,2.90475346135159,2.84573707812917,0.862271971731369,2.26927296201383,2.81521798662318,3.5071317188412,1.94633074457919,2.089512999133,2.67516777330327,0.796137067273973,0,0,0,0.207125772535502,0.938104239924385,0.540186184383045,0,0.983821158737019,0.462801338662135,0.465067889500816,0.268273401399619,0.116765342367169,0.658239399653922,1.64167464079095,0.891756905004413,0,0.439100230582101,0.671032093801859,37.4316108444146,25.314534645304,0.330418782983798,0.528901133327089,0.639864751605702,1.85789337488351,0.644337306610467,1.4117846723634,0.667134131534611,0.190225626112559,0.474529061544512,0.329397909448022,1.50801125280162,0.198956472041151,0.38992817423824,1.79763881730844,0.432276099749388,0.597423819763102,1.13800740571849,0.342745537829186,0,0.610953983535943,0.969762435838129,0.210407459670956,0.379419222745544,0,0.627994911365499,0.370191491765402,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29327233116623,0.947457058852424,0.651859905768103,0.848725428875941,0.469380496577004,0.335012514883631,0.714130922658041,0.780534591431195,1.10344600874334,0.8858587585951,0.956728611944923,1.3109065177259,1.55416483679306,0.867894351489069,1.50791283939272,0,0,0,16.6972613587304,14.7686725106176,2.13115428989678,0.757412781613119,2.52406575533005,3.51394869866975,5.17016154558717,1.43381278771531,3.56477878531831,3.11384183867716,1.61924280669958,4.9683495844923,5.53402889125133,28.276275845119,1.13552068166615,0.712262414669021,0.325773918707152,3.13443233647817,1.32745138339963,0.242780636154981,0.302323556964751,2.07465587731488,2.36241514304618,1.84461088766356,0.775284879504663,1.09060118843252,0.356497378384721,1.26414703174326,1.05418608574999,4.12542172992747,8.5109901438447,1.08036656418786,2.71653235943784,1.50035924522115,4.96552654198366,6.77801506887868,4.77192159746151,3.04464949114599,1.17335854031855,1.69465656691056,0.441056796109924,0.49465875882444,0.484393280087717,0.422190474497091,0.238744688006273,0.656563598980245,0.874442509889552,11.1255181206306,0,0.412773735926445,0.185194527369712,0.376736914009382,0.27338845544205,0,0,0.139951452323658,0,0.954670618015114,1.10717597753397,1.42323626988794,1.83609079397062,1.04544148007234,0.655087691238533,0.674321731924103,0.743881101528023,0.785267825952089,0,0.621339313086926,0.56369293868419,0,0.165458490457098,0.972255941720238,0.904118764344118,1.01373675294467,0.117357238645754,0.39061315453185,0.419437377702843,0.724752362478018,0.288030006257865,0.316011120628178,0.608175645870493,0.821687657318618,0.51968329191118,0.716106782669926,0.596044064343795,0,0,0.403865799792591,0.304827226619999,0.302478555410522,0.292373642219257,0.288635524920988,0.467507608726276,0.226730383615211,0.665957860122194,0.538283139656854,0.335769232728157,1.15913756419314,2.064507229963,2.38097111547445,1.07184189539533,1.50471631210609,55.3456805764725,48.3341498332536,63.591401991773,34.1987832863938,31.5137959094495,27.9495742034189,35.7761925122857,30.621841819247,24.9228324941313,33.1366599521165,1.14166082342594,3.19219898720825,3.75613932659095,4.61902762429759,3.98265008993166,5.51530525350042,8.00088220085815,6.38708677440572,8.02298023979538,3.53776096469316,10.6461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| |||
|short_description=p1@Trim46 | |||
}} |
Latest revision as of 20:27, 25 September 2015
Short description: | p1@Trim46 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Trim46_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | 0bp_to_ENSMUST00000041022, ENSMUST00000143637, NM_183037, uc008pyk.1_5end |
EntrezGene: | Trim46 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 2.16e-17 | 43 |
ectodermal cell | 1.46e-16 | 44 |
neurectodermal cell | 1.46e-16 | 44 |
neuron | 3.37e-16 | 33 |
neuronal stem cell | 3.37e-16 | 33 |
neuroblast | 3.37e-16 | 33 |
electrically signaling cell | 3.37e-16 | 33 |
electrically responsive cell | 6.80e-16 | 39 |
electrically active cell | 6.80e-16 | 39 |
CNS neuron (sensu Vertebrata) | 1.75e-15 | 23 |
neuroblast (sensu Vertebrata) | 1.75e-15 | 23 |
embryonic cell | 4.34e-07 | 70 |