FFCP PHASE1:Mm9::chr14:28435619..28435729,+: Difference between revisions
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{{FFCP|EntrezGene=238988|HGNC=|MCL_coexpression_id=1|UniProt=Q6PH08,Q3UHT7|association_with_transcript=0bp_to_NM_177814,uc007sty.1,uc007stz.1,uc007sua.1_5end|description=CAGE_peak_1_at_Erc2_5end|id=chr14:28435619..28435729,+|ontology_enrichment_celltype=CL:0000540!1.45e-14!33;CL:0000047!1.45e-14!33;CL:0000031!1.45e-14!33;CL:0000404!1.45e-14!33;CL:0002319!1.18e-10!43;CL:0000221!1.36e-10!44;CL:0000133!1.36e-10!44;CL:0000117!2.11e-10!23;CL:0000337!2.11e-10!23;CL:0000393!9.28e-10!39;CL:0000211!9.28e-10!39;CL:0000055!1.83e-07!50|ontology_enrichment_celltype_v019_2=CL:0000540,7.43e-15,33;CL:0000047,7.43e-15,33;CL:0000031,7.43e-15,33;CL:0000404,7.43e-15,33;CL:0002319,9.53e-11,43;CL:0000221,1.10e-10,44;CL:0000133,1.10e-10,44;CL:0000117,1.34e-10,23;CL:0000337,1.34e-10,23;CL:0000393,1.10e-09,39;CL:0000211,1.10e-09,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!4.51e-28!73;UBERON:0005743!4.51e-28!73;UBERON:0000073!1.62e-27!75;UBERON:0001016!1.62e-27!75;UBERON:0002346!2.85e-27!71;UBERON:0003075!2.85e-27!71;UBERON:0007284!2.85e-27!71;UBERON:0004121!4.71e-26!102;UBERON:0000924!4.71e-26!102;UBERON:0006601!4.71e-26!102;UBERON:0000033!3.10e-22!63;UBERON:0001049!4.19e-21!52;UBERON:0005068!4.19e-21!52;UBERON:0006241!4.19e-21!52;UBERON:0007135!4.19e-21!52;UBERON:0000955!2.08e-20!50;UBERON:0006238!2.08e-20!50;UBERON:0003056!4.67e-20!49;UBERON:0002616!1.10e-19!49;UBERON:0003080!2.98e-17!40;UBERON:0002780!1.17e-16!39;UBERON:0001890!1.17e-16!39;UBERON:0006240!1.17e-16!39;UBERON:0002020!4.20e-16!34;UBERON:0002791!1.41e-13!29;UBERON:0003528!1.41e-13!29;UBERON:0001893!1.41e-13!29;UBERON:0000025!1.87e-10!114;UBERON:0000956!1.88e-09!21;UBERON:0001869!1.88e-09!21;UBERON:0000203!1.88e-09!21;UBERON:0004111!2.92e-09!122;UBERON:0000468!9.25e-09!333;UBERON:0002619!1.29e-08!17;UBERON:0002021!3.52e-08!10;UBERON:0000411!3.52e-08!10;UBERON:0001950!3.52e-08!10;UBERON:0000922!4.78e-07!328;UBERON:0007811!5.30e-07!86|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.63e-28,73;UBERON:0001016,6.00e-28,75;UBERON:0002346,1.07e-26,64;UBERON:0003075,1.07e-26,64;UBERON:0007284,1.07e-26,64;UBERON:0004121,3.14e-24,95;UBERON:0000924,3.14e-24,95;UBERON:0006601,3.14e-24,95;UBERON:0000073,5.14e-23,54;UBERON:0001049,1.10e-21,52;UBERON:0005068,1.10e-21,52;UBERON:0006241,1.10e-21,52;UBERON:0007135,1.10e-21,52;UBERON:0003056,1.81e-20,49;UBERON:0010371,1.02e-19,73;UBERON:0000955,3.54e-19,47;UBERON:0006238,3.54e-19,47;UBERON:0002616,1.88e-18,46;UBERON:0003080,1.33e-17,40;UBERON:0010314,2.67e-17,92;UBERON:0002780,5.41e-17,39;UBERON:0001890,5.41e-17,39;UBERON:0006240,5.41e-17,39;UBERON:0002020,1.99e-16,34;UBERON:0003528,7.60e-14,29;UBERON:0002791,7.60e-14,29;UBERON:0001893,7.60e-14,29;UBERON:0000956,1.25e-09,21;UBERON:0001869,1.25e-09,21;UBERON:0000203,1.25e-09,21;UBERON:0000025,1.62e-09,114;UBERON:0002619,8.99e-09,17;UBERON:0004111,2.30e-08,122;UBERON:0002021,2.51e-08,10;UBERON:0000411,2.51e-08,10;UBERON:0001950,2.51e-08,10|phase1_expression=3.20297694209588,4.53668029931169,5.45999087267443,0.30246421130683,1.00179145989269,4.70061961353291,2.80335168714631,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,10.6304112688837,0,0.261199789138935,5.91971964335605,5.04700418347774,2.8711598205751,6.46142994238612,3.878482188346,3.80046838912748,3.02436155711917,7.53883736228036,0,0,0,0,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0.367093504323363,0,4.36050312760893,2.63623419281366,6.61061656852564,2.2397827460058,2.87505128729943,0,0,0,0,0.286533439938757,1.03134418455488,32.168317276676,26.4495489636016,24.719424736741,1.0165335962074,0.889294796111139,0.449949858640699,0,0,0.898800331555214,1.15265491596466,8.08778976006126,10.5304631898719,10.3059231062177,17.1390590642282,14.3564551618549,11.0241719293459,10.3513108699695,10.1114066527102,36.3382407297983,34.6032686210859,36.2511418484735,52.358856228887,51.141592773747,44.2776364973246,17.0301629390842,39.9561453122493,33.768412758675,46.5513165048395,40.0064423045479,42.3126742023432,3.3319525066601,2.87171928405785,10.4351215932604,7.74381489283248,11.5595126730318,10.2543606411185,18.8435161059824,12.0967259516281,2.66844398250329,0,0,0.35333957451034,4.50698943285378,1.28326477414318,0,0,1.29894624606728,0.506719730950197,1.51657333504435,3.76806803072898,0.258937883647172,9.35185476108396,8.67426633830679,8.8294988710521,8.30215790121811,13.565037649736,15.0513545133702,6.1576629751541,4.44950941921873,0.578397427679647,0,1.7794353494215,0,0,0,34.255353250351,27.0186251789357,3.32094171771169,0,0,0,39.9941007210877,33.3975440057597,18.0942267042525,62.0552823086427,65.718872533895,34.2850273523274,43.4806585021591,4.48093200941392,0.373220911830279,5.05445516867349,14.0996043443938,7.28674480591141,6.43725892413724,10.2635413989049,15.0704817835715,20.2068402479444,21.6512187281396,20.4269759540209,40.0990224645474,3.66465587985832,6.61871280587367,6.15828934573821,4.16471891612392,6.67313398141435,1.39300866608867,1.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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=238988 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q6PH08,Q3UHT7 | |||
|association_with_transcript=0bp_to_NM_177814,uc007sty.1,uc007stz.1,uc007sua.1_5end | |||
|cluster_id=chr14:28435619..28435729,+ | |||
|description=CAGE_peak_1_at_Erc2_5end | |||
|id=chr14:28435619..28435729,+ | |||
|ontology_enrichment_celltype=CL:0000540!1.45e-14!33;CL:0000047!1.45e-14!33;CL:0000031!1.45e-14!33;CL:0000404!1.45e-14!33;CL:0002319!1.18e-10!43;CL:0000221!1.36e-10!44;CL:0000133!1.36e-10!44;CL:0000117!2.11e-10!23;CL:0000337!2.11e-10!23;CL:0000393!9.28e-10!39;CL:0000211!9.28e-10!39;CL:0000055!1.83e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,7.43e-15,33;CL:0000047,7.43e-15,33;CL:0000031,7.43e-15,33;CL:0000404,7.43e-15,33;CL:0002319,9.53e-11,43;CL:0000221,1.10e-10,44;CL:0000133,1.10e-10,44;CL:0000117,1.34e-10,23;CL:0000337,1.34e-10,23;CL:0000393,1.10e-09,39;CL:0000211,1.10e-09,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.51e-28!73;UBERON:0005743!4.51e-28!73;UBERON:0000073!1.62e-27!75;UBERON:0001016!1.62e-27!75;UBERON:0002346!2.85e-27!71;UBERON:0003075!2.85e-27!71;UBERON:0007284!2.85e-27!71;UBERON:0004121!4.71e-26!102;UBERON:0000924!4.71e-26!102;UBERON:0006601!4.71e-26!102;UBERON:0000033!3.10e-22!63;UBERON:0001049!4.19e-21!52;UBERON:0005068!4.19e-21!52;UBERON:0006241!4.19e-21!52;UBERON:0007135!4.19e-21!52;UBERON:0000955!2.08e-20!50;UBERON:0006238!2.08e-20!50;UBERON:0003056!4.67e-20!49;UBERON:0002616!1.10e-19!49;UBERON:0003080!2.98e-17!40;UBERON:0002780!1.17e-16!39;UBERON:0001890!1.17e-16!39;UBERON:0006240!1.17e-16!39;UBERON:0002020!4.20e-16!34;UBERON:0002791!1.41e-13!29;UBERON:0003528!1.41e-13!29;UBERON:0001893!1.41e-13!29;UBERON:0000025!1.87e-10!114;UBERON:0000956!1.88e-09!21;UBERON:0001869!1.88e-09!21;UBERON:0000203!1.88e-09!21;UBERON:0004111!2.92e-09!122;UBERON:0000468!9.25e-09!333;UBERON:0002619!1.29e-08!17;UBERON:0002021!3.52e-08!10;UBERON:0000411!3.52e-08!10;UBERON:0001950!3.52e-08!10;UBERON:0000922!4.78e-07!328;UBERON:0007811!5.30e-07!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.63e-28,73;UBERON:0001016,6.00e-28,75;UBERON:0002346,1.07e-26,64;UBERON:0003075,1.07e-26,64;UBERON:0007284,1.07e-26,64;UBERON:0004121,3.14e-24,95;UBERON:0000924,3.14e-24,95;UBERON:0006601,3.14e-24,95;UBERON:0000073,5.14e-23,54;UBERON:0001049,1.10e-21,52;UBERON:0005068,1.10e-21,52;UBERON:0006241,1.10e-21,52;UBERON:0007135,1.10e-21,52;UBERON:0003056,1.81e-20,49;UBERON:0010371,1.02e-19,73;UBERON:0000955,3.54e-19,47;UBERON:0006238,3.54e-19,47;UBERON:0002616,1.88e-18,46;UBERON:0003080,1.33e-17,40;UBERON:0010314,2.67e-17,92;UBERON:0002780,5.41e-17,39;UBERON:0001890,5.41e-17,39;UBERON:0006240,5.41e-17,39;UBERON:0002020,1.99e-16,34;UBERON:0003528,7.60e-14,29;UBERON:0002791,7.60e-14,29;UBERON:0001893,7.60e-14,29;UBERON:0000956,1.25e-09,21;UBERON:0001869,1.25e-09,21;UBERON:0000203,1.25e-09,21;UBERON:0000025,1.62e-09,114;UBERON:0002619,8.99e-09,17;UBERON:0004111,2.30e-08,122;UBERON:0002021,2.51e-08,10;UBERON:0000411,2.51e-08,10;UBERON:0001950,2.51e-08,10 | |||
|phase1_expression=3.20297694209588,4.53668029931169,5.45999087267443,0.30246421130683,1.00179145989269,4.70061961353291,2.80335168714631,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,10.6304112688837,0,0.261199789138935,5.91971964335605,5.04700418347774,2.8711598205751,6.46142994238612,3.878482188346,3.80046838912748,3.02436155711917,7.53883736228036,0,0,0,0,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0.367093504323363,0,4.36050312760893,2.63623419281366,6.61061656852564,2.2397827460058,2.87505128729943,0,0,0,0,0.286533439938757,1.03134418455488,32.168317276676,26.4495489636016,24.719424736741,1.0165335962074,0.889294796111139,0.449949858640699,0,0,0.898800331555214,1.15265491596466,8.08778976006126,10.5304631898719,10.3059231062177,17.1390590642282,14.3564551618549,11.0241719293459,10.3513108699695,10.1114066527102,36.3382407297983,34.6032686210859,36.2511418484735,52.358856228887,51.141592773747,44.2776364973246,17.0301629390842,39.9561453122493,33.768412758675,46.5513165048395,40.0064423045479,42.3126742023432,3.3319525066601,2.87171928405785,10.4351215932604,7.74381489283248,11.5595126730318,10.2543606411185,18.8435161059824,12.0967259516281,2.66844398250329,0,0,0.35333957451034,4.50698943285378,1.28326477414318,0,0,1.29894624606728,0.506719730950197,1.51657333504435,3.76806803072898,0.258937883647172,9.35185476108396,8.67426633830679,8.8294988710521,8.30215790121811,13.565037649736,15.0513545133702,6.1576629751541,4.44950941921873,0.578397427679647,0,1.7794353494215,0,0,0,34.255353250351,27.0186251789357,3.32094171771169,0,0,0,39.9941007210877,33.3975440057597,18.0942267042525,62.0552823086427,65.718872533895,34.2850273523274,43.4806585021591,4.48093200941392,0.373220911830279,5.05445516867349,14.0996043443938,7.28674480591141,6.43725892413724,10.2635413989049,15.0704817835715,20.2068402479444,21.6512187281396,20.4269759540209,40.0990224645474,3.66465587985832,6.61871280587367,6.15828934573821,4.16471891612392,6.67313398141435,1.39300866608867,1.23469281844766,4.57778813682534,0,0,0,2.89976081549703,4.45599513964083,3.78130329068131,1.65721314909647,2.75469924446365,2.1597395804233,2.09280550275367,2.41446061259657,1.86824547787471,0.987359099480883,0.985004784474571,0.972825714550269,0.292399974850665,0.219550115291051,0.268412837520744,61.8252448778534,20.3751132510983,0,0,6.18535926552179,10.6828869055802,5.67016829817211,4.63872106633688,2.89091456998331,2.47293313946327,2.37264530772256,4.11747386810027,2.76468729680296,1.98956472041151,2.14460495831032,0.898819408654221,1.72910439899755,0.796565093017469,2.27601481143698,4.68418901699888,7.88954149711563,4.68398054044223,3.87904974335251,3.57692681440625,7.8413306034079,10.4803205065518,5.96595165797224,7.03363834354263,21.6410417773619,1.00107063429656,1.57247196090562,1.57403478669398,2.84004169943904,3.85883455603867,5.60176873919124,6.61701116136864,2.59416362840057,4.3929826110093,15.814502718009,7.07067800570156,8.11297950097858,11.1134706296729,11.3020370518805,9.16642690590398,2.77129785249907,5.68474235311454,1.79261474086228,2.37643120085263,2.34690248288502,1.84256883185997,2.14239276797412,1.36593553500459,1.89162172927429,0.8858587585951,1.43509291791738,2.94953966488328,3.62638461918381,2.60368305446721,0,0,0.491764273019036,0,30.6651626876683,32.1160021262637,1.3114795630134,0,31.8663301610419,35.9203644752907,43.3001029442926,18.161628644394,26.5130422158049,24.6276581786284,31.5752347306418,39.4545408180271,34.7853244592941,85.4714701682007,0.567760340833074,3.5613120733451,4.23506094319298,2.47455184458803,11.9470624505967,3.64170954232472,1.51161778482376,1.13163047853539,1.18120757152309,4.30409207121498,1.03371317267288,3.63533729477506,2.13898427030833,6.32073515871632,13.7044191147498,10.3135543248187,27.9160476718106,8.10274923140896,4.78627129996192,9.21649250635847,18.9754049997233,17.658512942605,22.7077648430927,11.5696680663548,0,1.0591603543191,1.10264199027481,0,0.161464426695906,0.301564624640779,0.119372344003136,0.328281799490123,3.49777003955821,24.2907145633768,0.512612642393558,1.65109494370578,0.555583582109135,0.188368457004691,0.410082683163076,0.228778173206523,0,0,0.138199973804424,0.954670618015114,4.4287039101359,5.28630614529807,2.48412283890143,2.29997125615916,2.62035076495413,2.96701562046606,2.31429676030941,0,0.388844919875379,6.83473244395618,1.12738587736838,2.69129782879162,1.65458490457098,1.16670713006429,1.16243841129958,1.01373675294467,1.99507305697782,1.69265700297135,2.09718688851422,0.483168241652012,1.15212002503146,0,0.202725215290164,0.205421914329655,0.129920822977795,0,0.596044064343795,0,0.147689527174577,0,0,0,0,0.0962118416403295,0,0.453460767230423,0.665957860122194,0.179427713218951,0.167884616364078,1.54551675225752,1.12609485270709,0.73260649706906,0,2.00628841614145,98.2668206153696,70.8900864221052,69.8932526396064,73.2094556784109,66.4530044177523,84.6041165076465,73.5774525252668,79.706852970687,90.6284817968409,88.0192529978094,3.736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| |||
|short_description=p1@Erc2 | |||
}} |
Latest revision as of 20:22, 25 September 2015
Short description: | p1@Erc2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Erc2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_NM_177814, uc007sty.1, uc007stz.1, uc007sua.1_5end |
EntrezGene: | Erc2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 7.43e-15 | 33 |
neuronal stem cell | 7.43e-15 | 33 |
neuroblast | 7.43e-15 | 33 |
electrically signaling cell | 7.43e-15 | 33 |
neural cell | 9.53e-11 | 43 |
ectodermal cell | 1.10e-10 | 44 |
neurectodermal cell | 1.10e-10 | 44 |
CNS neuron (sensu Vertebrata) | 1.34e-10 | 23 |
neuroblast (sensu Vertebrata) | 1.34e-10 | 23 |
electrically responsive cell | 1.10e-09 | 39 |
electrically active cell | 1.10e-09 | 39 |