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FFCP PHASE1:Mm9::chr3:88754323..88754354,-: Difference between revisions

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{{FFCP|EntrezGene=65111|HGNC=|UniProt=G3X9M0|association_with_transcript=0bp_to_ENSMUST00000090938_5end|description=CAGE_peak_7_at_Dap3_5end|id=chr3:88754323..88754354,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!5.30e-18!73;UBERON:0005743!5.30e-18!73;UBERON:0000073!4.15e-17!75;UBERON:0001016!4.15e-17!75;UBERON:0004121!6.54e-16!102;UBERON:0000924!6.54e-16!102;UBERON:0006601!6.54e-16!102;UBERON:0002346!3.49e-15!71;UBERON:0003075!3.49e-15!71;UBERON:0007284!3.49e-15!71;UBERON:0000033!5.97e-15!63;UBERON:0000955!6.05e-14!50;UBERON:0006238!6.05e-14!50;UBERON:0001049!9.89e-14!52;UBERON:0005068!9.89e-14!52;UBERON:0006241!9.89e-14!52;UBERON:0007135!9.89e-14!52;UBERON:0002616!2.37e-13!49;UBERON:0003056!4.69e-11!49;UBERON:0003080!6.53e-10!40;UBERON:0002020!8.57e-10!34;UBERON:0002780!2.46e-09!39;UBERON:0001890!2.46e-09!39;UBERON:0006240!2.46e-09!39;UBERON:0000153!8.38e-09!94;UBERON:0002791!2.01e-08!29;UBERON:0003528!2.01e-08!29;UBERON:0001893!2.01e-08!29;UBERON:0007811!4.84e-08!86;UBERON:0000025!8.53e-08!114;UBERON:0002021!3.93e-07!10;UBERON:0000411!3.93e-07!10;UBERON:0001950!3.93e-07!10;UBERON:0004111!8.45e-07!122|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.26e-17,73;UBERON:0001016,7.10e-17,75;UBERON:0010314,1.01e-15,92;UBERON:0004121,3.15e-15,95;UBERON:0000924,3.15e-15,95;UBERON:0006601,3.15e-15,95;UBERON:0002346,9.32e-15,64;UBERON:0003075,9.32e-15,64;UBERON:0007284,9.32e-15,64;UBERON:0000073,1.22e-14,54;UBERON:0001049,1.98e-13,52;UBERON:0005068,1.98e-13,52;UBERON:0006241,1.98e-13,52;UBERON:0007135,1.98e-13,52;UBERON:0010371,4.38e-12,73;UBERON:0000955,8.08e-12,47;UBERON:0006238,8.08e-12,47;UBERON:0002616,3.28e-11,46;UBERON:0003056,7.20e-11,49;UBERON:0002020,1.43e-09,34;UBERON:0003080,1.71e-09,40;UBERON:0002780,6.95e-09,39;UBERON:0001890,6.95e-09,39;UBERON:0006240,6.95e-09,39;UBERON:0003528,4.58e-08,29;UBERON:0002791,4.58e-08,29;UBERON:0001893,4.58e-08,29;UBERON:0002021,8.45e-08,10;UBERON:0000411,8.45e-08,10;UBERON:0001950,8.45e-08,10;UBERON:0000025,8.41e-07,114|phase1_expression=1.76163731815273,0.348975407639361,0,0.30246421130683,0,0.33575854382378,0.467225281191051,0,0.281577444303333,0,0.513653904676515,0.478632953972018,0.342401459862411,0.0874204024189974,0.666219523631325,0.202475267389826,0,0.946386496074713,0.411343300817216,0.84877930359606,1.53077922271926,1.19149141441062,0.522399578277871,0,0,0,0,0,0,0,0.443461021310609,3.17515336729816,2.46025915033828,0,0.288851619751275,0.498703936075477,0.408338712524738,0.837063261473815,0,0,0,0,0,0.881277725829041,0.506884656097573,0.367093504323363,0.782391344348039,1.09012578190223,0.878744730937887,1.55543919259427,1.39986421625363,2.87505128729943,1.17447824240415,0.725362142011344,0.672187598284928,0.257259436035947,0.85960031981627,1.54701627683233,2.83243045203437,1.05798195854407,3.80298842103708,0.677689064138264,0,0.449949858640699,1.97773272513395,0,1.49800055259202,1.92109152660777,0.829516898467821,0.270011876663381,1.47227472945967,2.57085885963423,1.98781686856452,0.979926393719632,1.15014565221884,0.919218786610021,3.30347642998166,4.97980618532232,5.83704826373725,1.58263545276233,1.9212405156506,1.56274011167028,3.62937898701795,2.8138130501584,2.59757021220577,1.76777151284201,1.42371680799103,2.05039390407831,0.302904773332736,1.058001841495,0.579728977403356,0,1.3599426674155,4.31762553310254,1.29955283489534,1.79210754838934,1.54488862144927,1.02258193546835,0.519572009205738,0.35333957451034,1.54927761754349,0,5.09610479413291,0,0,1.26679932737549,0,0.5709193985953,1.55362730188303,0.890652834388949,1.56136794089522,1.82679286987285,2.30615497256059,0.904335843315735,1.88141931417128,0.879666139307728,1.23597483867187,0.578397427679647,0,0.970601099684455,0.662524555381181,1.93950101254089,0,5.5628351432194,7.74952815209784,0.255457055208591,0.479260498023681,1.79970819298022,1.01656181658452,6.29120685500255,3.20250421973039,1.50785222535437,5.21472960576829,5.8814555185976,6.02585329222724,3.73154905055843,2.24046600470696,0.870848794270651,0.505445516867349,0.420883711772948,1.95180664444056,1.14951052216736,2.52086981727489,1.65775299619287,1.90502197623718,1.40925092313335,1.59292931751539,2.06962696591213,2.37124792226126,1.51284864134255,2.28736461413134,1.53437012699302,0.556094498451196,1.0447564995665,1.02891068203972,2.9855140022774,0,0.51469581422943,1.13665399758237,2.27838349789052,2.57978665979206,1.08037236876609,2.3674473558521,1.57411385397923,1.54267112887378,0.232533944750408,1.3413670069981,3.15266424391358,1.48103864922132,0.820837320395476,1.13496333364198,1.90059983652932,1.53685080703735,1.34206418760372,3.78521907415429,2.36680608472354,0.330418782983798,0.264450566663544,1.91959425481711,1.39342003116263,1.41754207454303,0.80673409849337,1.11189021922435,1.33157938278791,0,0.329397909448022,0.754005626400808,0.795825888164603,1.16978452271472,0,1.08069024937347,0.597423819763102,2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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=65111
|HGNC=
|TSSclassifier=NA
|UniProt=G3X9M0
|association_with_transcript=0bp_to_ENSMUST00000090938_5end
|cluster_id=chr3:88754323..88754354,-
|description=CAGE_peak_7_at_Dap3_5end
|id=chr3:88754323..88754354,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!5.30e-18!73;UBERON:0005743!5.30e-18!73;UBERON:0000073!4.15e-17!75;UBERON:0001016!4.15e-17!75;UBERON:0004121!6.54e-16!102;UBERON:0000924!6.54e-16!102;UBERON:0006601!6.54e-16!102;UBERON:0002346!3.49e-15!71;UBERON:0003075!3.49e-15!71;UBERON:0007284!3.49e-15!71;UBERON:0000033!5.97e-15!63;UBERON:0000955!6.05e-14!50;UBERON:0006238!6.05e-14!50;UBERON:0001049!9.89e-14!52;UBERON:0005068!9.89e-14!52;UBERON:0006241!9.89e-14!52;UBERON:0007135!9.89e-14!52;UBERON:0002616!2.37e-13!49;UBERON:0003056!4.69e-11!49;UBERON:0003080!6.53e-10!40;UBERON:0002020!8.57e-10!34;UBERON:0002780!2.46e-09!39;UBERON:0001890!2.46e-09!39;UBERON:0006240!2.46e-09!39;UBERON:0000153!8.38e-09!94;UBERON:0002791!2.01e-08!29;UBERON:0003528!2.01e-08!29;UBERON:0001893!2.01e-08!29;UBERON:0007811!4.84e-08!86;UBERON:0000025!8.53e-08!114;UBERON:0002021!3.93e-07!10;UBERON:0000411!3.93e-07!10;UBERON:0001950!3.93e-07!10;UBERON:0004111!8.45e-07!122
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.26e-17,73;UBERON:0001016,7.10e-17,75;UBERON:0010314,1.01e-15,92;UBERON:0004121,3.15e-15,95;UBERON:0000924,3.15e-15,95;UBERON:0006601,3.15e-15,95;UBERON:0002346,9.32e-15,64;UBERON:0003075,9.32e-15,64;UBERON:0007284,9.32e-15,64;UBERON:0000073,1.22e-14,54;UBERON:0001049,1.98e-13,52;UBERON:0005068,1.98e-13,52;UBERON:0006241,1.98e-13,52;UBERON:0007135,1.98e-13,52;UBERON:0010371,4.38e-12,73;UBERON:0000955,8.08e-12,47;UBERON:0006238,8.08e-12,47;UBERON:0002616,3.28e-11,46;UBERON:0003056,7.20e-11,49;UBERON:0002020,1.43e-09,34;UBERON:0003080,1.71e-09,40;UBERON:0002780,6.95e-09,39;UBERON:0001890,6.95e-09,39;UBERON:0006240,6.95e-09,39;UBERON:0003528,4.58e-08,29;UBERON:0002791,4.58e-08,29;UBERON:0001893,4.58e-08,29;UBERON:0002021,8.45e-08,10;UBERON:0000411,8.45e-08,10;UBERON:0001950,8.45e-08,10;UBERON:0000025,8.41e-07,114
|phase1_expression=1.76163731815273,0.348975407639361,0,0.30246421130683,0,0.33575854382378,0.467225281191051,0,0.281577444303333,0,0.513653904676515,0.478632953972018,0.342401459862411,0.0874204024189974,0.666219523631325,0.202475267389826,0,0.946386496074713,0.411343300817216,0.84877930359606,1.53077922271926,1.19149141441062,0.522399578277871,0,0,0,0,0,0,0,0.443461021310609,3.17515336729816,2.46025915033828,0,0.288851619751275,0.498703936075477,0.408338712524738,0.837063261473815,0,0,0,0,0,0.881277725829041,0.506884656097573,0.367093504323363,0.782391344348039,1.09012578190223,0.878744730937887,1.55543919259427,1.39986421625363,2.87505128729943,1.17447824240415,0.725362142011344,0.672187598284928,0.257259436035947,0.85960031981627,1.54701627683233,2.83243045203437,1.05798195854407,3.80298842103708,0.677689064138264,0,0.449949858640699,1.97773272513395,0,1.49800055259202,1.92109152660777,0.829516898467821,0.270011876663381,1.47227472945967,2.57085885963423,1.98781686856452,0.979926393719632,1.15014565221884,0.919218786610021,3.30347642998166,4.97980618532232,5.83704826373725,1.58263545276233,1.9212405156506,1.56274011167028,3.62937898701795,2.8138130501584,2.59757021220577,1.76777151284201,1.42371680799103,2.05039390407831,0.302904773332736,1.058001841495,0.579728977403356,0,1.3599426674155,4.31762553310254,1.29955283489534,1.79210754838934,1.54488862144927,1.02258193546835,0.519572009205738,0.35333957451034,1.54927761754349,0,5.09610479413291,0,0,1.26679932737549,0,0.5709193985953,1.55362730188303,0.890652834388949,1.56136794089522,1.82679286987285,2.30615497256059,0.904335843315735,1.88141931417128,0.879666139307728,1.23597483867187,0.578397427679647,0,0.970601099684455,0.662524555381181,1.93950101254089,0,5.5628351432194,7.74952815209784,0.255457055208591,0.479260498023681,1.79970819298022,1.01656181658452,6.29120685500255,3.20250421973039,1.50785222535437,5.21472960576829,5.8814555185976,6.02585329222724,3.73154905055843,2.24046600470696,0.870848794270651,0.505445516867349,0.420883711772948,1.95180664444056,1.14951052216736,2.52086981727489,1.65775299619287,1.90502197623718,1.40925092313335,1.59292931751539,2.06962696591213,2.37124792226126,1.51284864134255,2.28736461413134,1.53437012699302,0.556094498451196,1.0447564995665,1.02891068203972,2.9855140022774,0,0.51469581422943,1.13665399758237,2.27838349789052,2.57978665979206,1.08037236876609,2.3674473558521,1.57411385397923,1.54267112887378,0.232533944750408,1.3413670069981,3.15266424391358,1.48103864922132,0.820837320395476,1.13496333364198,1.90059983652932,1.53685080703735,1.34206418760372,3.78521907415429,2.36680608472354,0.330418782983798,0.264450566663544,1.91959425481711,1.39342003116263,1.41754207454303,0.80673409849337,1.11189021922435,1.33157938278791,0,0.329397909448022,0.754005626400808,0.795825888164603,1.16978452271472,0,1.08069024937347,0.597423819763102,2.27601481143698,1.14248512609729,1.1270773567308,1.22190796707189,1.74557238450863,1.19230893813542,1.39120381673366,0.738050739898011,1.255989822731,1.60416313098341,0.296452627087149,1.50160595144485,0.589676985339609,0.674586337154561,1.42002084971952,1.4470629585145,1.2731292589071,1.43848068725405,1.45921704097532,0.823684239564244,10.0637744569148,2.23284568601102,0.936113019343682,1.51547326768267,0.896987067609561,0.482443521363367,0.369506380333209,0.757965647081939,0.814824882210129,0.848725428875941,0.234690248288502,0.335012514883631,0,0.780534591431195,0.472905432318573,0.44292937929755,0.637819074629948,0.327726629431476,1.03610989119537,0.578596234326046,3.01582567878545,0.54390568381871,0.491764273019036,0.827810238914197,6.10092241953609,5.74337264301796,1.47541450839008,2.27223834483936,1.57754109708128,0.390438744296638,1.50796378412959,0.955875191810208,1.55959071857676,1.98153571552183,0.809621403349789,1.46127928955656,1.18586333383957,5.46246237917072,0.99358059645788,1.24645922567079,2.28041743095006,1.31976098378028,1.32745138339963,2.42780636154981,1.209294227859,0.377210159511796,0.590603785761546,0.307435147943927,1.03371317267288,0,0.712994756769443,0.632073515871632,1.05418608574999,1.03135543248187,0.680879211507576,1.8006109403131,1.4229455216103,1.07168517515796,0.709360934569094,1.24858172321449,1.81003922662333,2.43571959291679,0.23467170806371,0.42366414172764,0,0.65954501176592,1.29171541356724,0.422190474497091,0.238744688006273,0.164140899745061,0.874442509889552,5.37733375830478,0.683483523191411,0.82554747185289,0.925972636848558,0.565105371014073,0.683471138605126,0.915112692826091,1.35982743995084,0.979660166265606,0.552799895217695,0,0.949007980743406,0.406638934253697,0.648032044930808,1.46361807210128,0.87345025498471,0.944050424693745,0.743881101528023,0,0.129614973291793,1.24267862617385,3.94585057078933,1.19613236835183,0.496375471371293,0.777804753376191,0.774958940866387,2.19642963138012,1.40828686374905,1.43224823328345,3.35549902162275,1.20792060413003,3.45636007509439,1.26404448251271,1.01362607645082,1.43795340030758,1.03936658382236,1.43221356533985,0.993406773906324,1.20195449519969,0.886137163047463,0.706765149637033,0.533447646584999,0.504130925684203,0.877120926657772,0.192423683280659,0.350630706544707,0.453460767230423,0.665957860122194,0.0897138566094757,0.335769232728157,0.579568782096571,0.375364950902364,1.09890974560359,0.857473516316263,0,3.95326289831947,3.22227665555024,2.86447756719698,5.67115501734169,4.11049511862385,3.0215755895588,9.45031500324528,7.65546045481175,4.07828168085784,3.10656187051092,1.3492355185943,2.79317411380722,0,0.486213434136588,1.25767897576789,0.919217542250071,0.888986911206461,1.23621034343337,0,2.02157769411038,1.77435509923168,0.565879024158229,0.842773567228942,1.47257850531199,0.746661096422973,1.42888107384922,1.0429589335037,1.54327376370964,2.88460130562315,1.03039244094078,0.685738504770831,1.4198064492747,0.476872379894642,1.88950341622027,1.97629698872194,0.846146078916765,0.914639864363863,0.789209134313529,1.22223702461276,2.24456908663095,1.18635018124174,1.37906275325789,2.86461730218783,1.23949472948773,0.771626443924566,1.24905288968973,1.63752125911786,1.28922632428979,2.29545998482612,1.10295709559758,1.15933917810211
|short_description=p7@Dap3
}}

Latest revision as of 20:11, 25 September 2015

Short description:p7@Dap3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_7_at_Dap3_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000090938_5end
EntrezGene:Dap3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p7@Dap3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.76
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.28
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.51
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.48
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.34
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.95
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.41
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.85
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.53
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.19
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.52
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I33.18
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G62.46
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.50
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.84
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.88
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.51
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.09
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.88
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.56
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.40
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.67
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.55
Mouse Granule cells, donor1.CNhs12131.11713-123C32.83
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C73.80
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.50
Mouse Microglia, donor2.CNhs12634.11736-123E81.92
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.83
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.47
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.99
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.98
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.15
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.98
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D75.84
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.58
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.92
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.63
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.81
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.60
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.77
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.42
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.05
Mouse Schwann, donor1.CNhs12507.11728-123D90.30
Mouse Schwann, donor2.CNhs12573.11746-123F91.06
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C41.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C84.32
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.79
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.54
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.02
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.55
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I85.10
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.27
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.57
accessory axillary lymph node, adult.CNhs10475.1063-29H91.55
adrenal gland, adult.CNhs10508.49-24D70.89
adrenal gland, embryo E14.CNhs11038.406-44C51.56
adrenal gland, embryo E16.CNhs11004.1254-43D61.83
adrenal gland, embryo E17.CNhs11043.1263-45I12.31
adrenal gland, embryo E18.CNhs11026.1262-18F50.90
adrenal gland, neonate N00.CNhs11191.1311-23C11.88
adrenal gland, neonate N25.CNhs11223.1377-27I30.88
amnion, adult pregnant day17.5.CNhs10488.583-22A81.24
aorta, adult.CNhs10498.46-23H10.58
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.97
bone (os femoris), neonate N16.CNhs11225.1525-43A60.66
bone (os femoris), neonate N20.CNhs11195.1350-25C31.94
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B25.56
cerebellum, neonate N30.CNhs11135.1395-42I27.75
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.48
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.02
corpora quadrigemina, adult.CNhs10501.16-22A46.29
corpus striatum, adult.CNhs10487.19-21D83.20
corpus striatum, neonate N00.CNhs11226.630-43F11.51
cortex, adult.CNhs10473.12-14D55.21
cortex, neonate N30.CNhs11107.1392-42F25.88
diencephalon, adult.CNhs10482.20-12F26.03
diencephalon, neonate N30.CNhs11201.1388-42B23.73
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.24
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.87
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C61.95
eyeball, embryo E14.CNhs10521.399-16E21.15
eyeball, embryo E15.CNhs10593.426-16C92.52
eyeball, embryo E17.CNhs11023.1261-18D41.66
eyeball, neonate N00.CNhs11207.633-15C61.91
eyeball, neonate N01.CNhs11140.1532-43E71.41
eyeball, neonate N02.CNhs11205.1551-44G81.59
eyeball, neonate N16.CNhs11188.777-19A22.07
forelimb, embryo E11.CNhs10596.335-25E22.37
forelimb, embryo E12.CNhs10600.359-14H21.51
forelimb, embryo E13.CNhs10589.384-1E22.29
forelimb, embryo E14.CNhs10577.413-26A81.53
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B51.03
gonad, embryo E13.CNhs11044.1564-45I62.99
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.51
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.14
heart, embryo E11.CNhs10586.331-24E92.28
heart, embryo E12.CNhs11015.353-12F52.58
heart, embryo E13.CNhs11013.376-3I91.08
heart, embryo E14.CNhs10597.403-26D42.37
heart, embryo E15.CNhs11017.431-16C81.57
heart, embryo E16.CNhs11021.457-17C61.54
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G31.34
heart, neonate N00.CNhs11213.639-21E33.15
heart, neonate N03.CNhs11221.1349-25I21.48
heart, neonate N10.CNhs11118.749-24G10.82
heart, neonate N16.CNhs11209.782-15G11.13
heart, neonate N20.CNhs11127.821-26I61.90
heart, neonate N25.CNhs11196.1351-25D31.54
heart, neonate N30.CNhs11202.1390-42D21.34
hippocampus, adult.CNhs10478.13-16E83.79
hippocampus, neonate N00.CNhs11228.627-43G12.37
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I51.92
intestine, embryo E13.CNhs11010.381-16D51.39
intestine, embryo E15.CNhs10602.976-16D81.42
intestine, embryo E16.CNhs10585.463-22H40.81
intestine, embryo E17.CNhs10582.482-18D31.11
intestine, embryo E18.CNhs10526.1289-20F71.33
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A51.17
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E31.08
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I92.28
kidney, embryo E15.CNhs10997.434-16F81.14
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I21.22
kidney, embryo E18.CNhs11001.1288-20C71.75
kidney, neonate N00.CNhs11214.646-21G71.19
kidney, neonate N10.CNhs11206.758-6D51.39
kidney, neonate N20.CNhs11113.832-19I10.74
kidney, neonate N25.CNhs11122.1353-25F31.26
kidney, neonate N30.CNhs11203.1385-42H11.60
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F81.50
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E10.67
liver, embryo E15.CNhs10520.433-16D71.42
liver, embryo E16.CNhs10523.462-17F51.45
liver, embryo E17.CNhs10510.481-18A31.27
liver, embryo E18.CNhs10579.499-43G41.44
liver, neonate N00.CNhs11117.641-24F41.46
liver, neonate N03.CNhs11123.1345-25G20.82
liver, neonate N06.CNhs11101.684-20A810.06
liver, neonate N07.CNhs11103.716-20H22.23
liver, neonate N10.CNhs11115.751-24B90.94
liver, neonate N20.CNhs11220.823-25A31.52
liver, neonate N25.CNhs11198.1368-26H10.90
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.76
lung, embryo E14.CNhs10604.404-26F80.81
lung, embryo E15.CNhs11020.432-17C50.85
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.78
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.64
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C71.04
lung, neonate N30.CNhs11133.1394-42H20.58
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C26.10
medulla oblongata, neonate N30.CNhs11200.1396-42A35.74
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.48
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.27
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.58
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.51
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.96
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.56
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.98
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.46
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I95.46
ovary, adult.CNhs10507.91-2I70.99
ovary, embryo E18.CNhs11040.505-44H71.25
ovary, neonate N00.CNhs11217.1299-22I42.28
oviduct, adult pregnant day01.CNhs10500.988-6G61.32
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F42.43
pancreas, embryo E15.CNhs11042.1556-45F21.21
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G91.03
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E61.80
pituitary gland, embryo E13.CNhs11009.370-44C71.42
pituitary gland, embryo E14.CNhs11037.398-44A51.07
pituitary gland, embryo E15.CNhs10592.427-16B90.71
pituitary gland, embryo E16.CNhs11036.449-43F61.25
pituitary gland, embryo E17.CNhs11039.1265-44F51.81
pituitary gland, neonate N00.CNhs11190.1308-22E92.44
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.66
skin, neonate N00.CNhs11124.650-25G41.29
skin, neonate N03.CNhs11215.662-22H30.42
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C95.38
spleen, adult.CNhs10465.25-2G20.68
spleen, embryo E16.CNhs11035.461-43C10.83
spleen, embryo E18.CNhs11011.1271-21F20.93
spleen, neonate N10.CNhs11116.752-24D10.57
spleen, neonate N20.CNhs11112.824-19H10.68
spleen, neonate N25.CNhs11099.1354-25G30.92
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.36
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.98
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.55
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.95
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.65
stomach, embryo E17.CNhs11006.1035-18D51.46
stomach, embryo E18.CNhs10999.1286-20C60.87
stomach, neonate N03.CNhs11193.1340-24B80.94
stomach, neonate N07.CNhs11210.718-18A90.74
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G53.95
testis, embryo E13.CNhs11031.389-23F51.20
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G50.78
testis, embryo E17.CNhs11029.486-18I50.77
testis, embryo E18.CNhs11027.503-18G52.20
testis, neonate N00.CNhs11189.1300-22B71.41
testis, neonate N07.CNhs11222.726-26I41.43
testis, neonate N10.CNhs11204.763-44D93.36
testis, neonate N20.CNhs11110.839-18H31.21
testis, neonate N30.CNhs11130.1391-42E23.46
thymus, adult.CNhs10471.38-12B51.26
thymus, embryo E14.CNhs11041.402-44I41.01
thymus, embryo E15.CNhs11005.430-45I21.44
thymus, embryo E16.CNhs11002.456-26C51.04
thymus, embryo E17.CNhs10581.478-18C11.43
thymus, embryo E18.CNhs10595.1273-19G40.99
thymus, neonate N02.CNhs11181.1541-43F81.20
thymus, neonate N03.CNhs11137.2104-43C70.89
thymus, neonate N06.CNhs11197.681-26C40.71
thymus, neonate N07.CNhs11211.713-19D30.53
thymus, neonate N10.CNhs11194.748-24E40.50
thymus, neonate N20.CNhs11186.820-7A20.88
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.35
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.67
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E51.10
vagina, adult.CNhs10502.89-27D50.86
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.95
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.22
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.86
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D75.67
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.11
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A69.45
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A77.66
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.08
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.11
whole body, embryo E11.CNhs11014.324-5I81.35
whole body, embryo E12.CNhs10587.857-27C92.79
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B11.26
whole body, embryo E16.CNhs10514.453-14F20.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.84
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.47
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.04
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.89
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.98
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.85
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.38
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.24
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I51.25
whole body, embryo E18.CNhs10516.493-3B31.64
whole body, neonate N00.CNhs10525.657-19C21.29
whole body, neonate N01.CNhs10576.659-23C62.30
whole body, neonate N06.CNhs10515.692-21D11.10
whole body, neonate N10.CNhs10518.761-6B41.16





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
central nervous system1.26e-1773
nervous system7.10e-1775
structure with developmental contribution from neural crest1.01e-1592
ectoderm-derived structure3.15e-1595
ectoderm3.15e-1595
presumptive ectoderm3.15e-1595
neurectoderm9.32e-1564
neural plate9.32e-1564
presumptive neural plate9.32e-1564
regional part of nervous system1.22e-1454
neural tube1.98e-1352
neural rod1.98e-1352
future spinal cord1.98e-1352
neural keel1.98e-1352
ecto-epithelium4.38e-1273
brain8.08e-1247
future brain8.08e-1247
regional part of brain3.28e-1146
pre-chordal neural plate7.20e-1149
gray matter1.43e-0934
anterior neural tube1.71e-0940
regional part of forebrain6.95e-0939
forebrain6.95e-0939
future forebrain6.95e-0939
brain grey matter4.58e-0829
regional part of telencephalon4.58e-0829
telencephalon4.58e-0829
occipital lobe8.45e-0810
visual cortex8.45e-0810
neocortex8.45e-0810
tube8.41e-07114
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