FFCP PHASE1:Mm9::chr5:22251835..22251901,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=269629 | |EntrezGene=269629 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=428 | |MCL_coexpression_id=428 | ||
|TSSclassifier=NA | |||
|UniProt=D3Z3S3,E9QN56,Q9CTN8 | |UniProt=D3Z3S3,E9QN56,Q9CTN8 | ||
|association_with_transcript=-109bp_to_ENSMUST00000073678,ENSMUST00000115141,NM_001081231,NM_029990,uc008wpv.2,uc012dst.1_5end | |association_with_transcript=-109bp_to_ENSMUST00000073678,ENSMUST00000115141,NM_001081231,NM_029990,uc008wpv.2,uc012dst.1_5end | ||
|cluster_id=chr5:22251835..22251901,+ | |||
|description=CAGE_peak_3_at_Lhfpl3_5end | |description=CAGE_peak_3_at_Lhfpl3_5end | ||
|id=chr5:22251835..22251901,+ | |id=chr5:22251835..22251901,+ | ||
|ontology_enrichment_celltype=CL:0000540!1.09e-14!33;CL:0000047!1.09e-14!33;CL:0000031!1.09e-14!33;CL:0000404!1.09e-14!33;CL:0000221!3.55e-13!44;CL:0000133!3.55e-13!44;CL:0002319!6.32e-13!43;CL:0000117!1.95e-12!23;CL:0000337!1.95e-12!23;CL:0000393!7.10e-11!39;CL:0000211!7.10e-11!39;CL:0000055!1.63e-09!50 | |ontology_enrichment_celltype=CL:0000540!1.09e-14!33;CL:0000047!1.09e-14!33;CL:0000031!1.09e-14!33;CL:0000404!1.09e-14!33;CL:0000221!3.55e-13!44;CL:0000133!3.55e-13!44;CL:0002319!6.32e-13!43;CL:0000117!1.95e-12!23;CL:0000337!1.95e-12!23;CL:0000393!7.10e-11!39;CL:0000211!7.10e-11!39;CL:0000055!1.63e-09!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.97e-16,23;CL:0000337,1.97e-16,23;CL:0000540,1.77e-15,33;CL:0000047,1.77e-15,33;CL:0000031,1.77e-15,33;CL:0000404,1.77e-15,33;CL:0002319,8.02e-13,43;CL:0000221,2.34e-12,44;CL:0000133,2.34e-12,44;CL:0000393,5.28e-12,39;CL:0000211,5.28e-12,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!1.44e-32!102;UBERON:0000924!1.44e-32!102;UBERON:0006601!1.44e-32!102;UBERON:0001017!1.75e-31!73;UBERON:0005743!1.75e-31!73;UBERON:0000073!2.49e-31!75;UBERON:0001016!2.49e-31!75;UBERON:0002346!1.37e-28!71;UBERON:0003075!1.37e-28!71;UBERON:0007284!1.37e-28!71;UBERON:0000033!1.83e-23!63;UBERON:0001049!2.13e-22!52;UBERON:0005068!2.13e-22!52;UBERON:0006241!2.13e-22!52;UBERON:0007135!2.13e-22!52;UBERON:0000955!9.40e-21!50;UBERON:0006238!9.40e-21!50;UBERON:0003056!1.65e-20!49;UBERON:0002616!6.19e-20!49;UBERON:0002020!7.31e-17!34;UBERON:0003080!1.36e-16!40;UBERON:0002780!7.39e-16!39;UBERON:0001890!7.39e-16!39;UBERON:0006240!7.39e-16!39;UBERON:0002791!4.98e-13!29;UBERON:0003528!4.98e-13!29;UBERON:0001893!4.98e-13!29;UBERON:0000153!7.51e-13!94;UBERON:0007811!3.81e-12!86;UBERON:0000956!2.09e-08!21;UBERON:0001869!2.09e-08!21;UBERON:0000203!2.09e-08!21;UBERON:0002021!1.46e-07!10;UBERON:0000411!1.46e-07!10;UBERON:0001950!1.46e-07!10;UBERON:0002619!2.38e-07!17 | |ontology_enrichment_uberon=UBERON:0004121!1.44e-32!102;UBERON:0000924!1.44e-32!102;UBERON:0006601!1.44e-32!102;UBERON:0001017!1.75e-31!73;UBERON:0005743!1.75e-31!73;UBERON:0000073!2.49e-31!75;UBERON:0001016!2.49e-31!75;UBERON:0002346!1.37e-28!71;UBERON:0003075!1.37e-28!71;UBERON:0007284!1.37e-28!71;UBERON:0000033!1.83e-23!63;UBERON:0001049!2.13e-22!52;UBERON:0005068!2.13e-22!52;UBERON:0006241!2.13e-22!52;UBERON:0007135!2.13e-22!52;UBERON:0000955!9.40e-21!50;UBERON:0006238!9.40e-21!50;UBERON:0003056!1.65e-20!49;UBERON:0002616!6.19e-20!49;UBERON:0002020!7.31e-17!34;UBERON:0003080!1.36e-16!40;UBERON:0002780!7.39e-16!39;UBERON:0001890!7.39e-16!39;UBERON:0006240!7.39e-16!39;UBERON:0002791!4.98e-13!29;UBERON:0003528!4.98e-13!29;UBERON:0001893!4.98e-13!29;UBERON:0000153!7.51e-13!94;UBERON:0007811!3.81e-12!86;UBERON:0000956!2.09e-08!21;UBERON:0001869!2.09e-08!21;UBERON:0000203!2.09e-08!21;UBERON:0002021!1.46e-07!10;UBERON:0000411!1.46e-07!10;UBERON:0001950!1.46e-07!10;UBERON:0002619!2.38e-07!17 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.17e-39,73;UBERON:0001016,3.61e-38,75;UBERON:0004121,2.55e-35,95;UBERON:0000924,2.55e-35,95;UBERON:0006601,2.55e-35,95;UBERON:0002346,1.24e-33,64;UBERON:0003075,1.24e-33,64;UBERON:0007284,1.24e-33,64;UBERON:0000073,1.93e-33,54;UBERON:0001049,6.50e-31,52;UBERON:0005068,6.50e-31,52;UBERON:0006241,6.50e-31,52;UBERON:0007135,6.50e-31,52;UBERON:0010371,1.07e-27,73;UBERON:0000955,1.29e-24,47;UBERON:0006238,1.29e-24,47;UBERON:0003056,8.74e-24,49;UBERON:0002020,1.79e-23,34;UBERON:0002616,2.29e-23,46;UBERON:0003080,1.20e-20,40;UBERON:0010314,3.67e-20,92;UBERON:0002780,1.64e-19,39;UBERON:0001890,1.64e-19,39;UBERON:0006240,1.64e-19,39;UBERON:0003528,2.59e-17,29;UBERON:0002791,2.59e-17,29;UBERON:0001893,2.59e-17,29;UBERON:0002021,1.23e-11,10;UBERON:0000411,1.23e-11,10;UBERON:0001950,1.23e-11,10;UBERON:0002619,2.33e-11,17;UBERON:0003076,7.88e-11,12;UBERON:0003057,7.88e-11,12;UBERON:0000956,5.62e-10,21;UBERON:0001869,5.62e-10,21;UBERON:0000203,5.62e-10,21;UBERON:0002240,2.57e-09,6;UBERON:0005174,2.57e-09,6;UBERON:0001137,2.57e-09,6;UBERON:0002420,3.06e-09,8;UBERON:0007245,3.06e-09,8;UBERON:0010009,3.06e-09,8;UBERON:0010011,3.06e-09,8;UBERON:0000454,3.06e-09,8;UBERON:0001948,5.49e-08,5;UBERON:0002315,5.49e-08,5;UBERON:0000025,1.15e-07,114 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0.171200729931206,0.0874204024189974,0.333109761815663,0,0,0,0,0,2.21112554392781,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0.194429899074283,0.419959264876088,0,0,0,0,0,0,0,2.22548106945558,3.70293685490423,2.53532561402472,0,0,0,0,0,8.68840320503374,8.06858441175265,0.414758449233911,0.810035629990144,0.420649922702764,18.852964970651,25.1790136684839,1.34739879136449,1.82106394934649,0,8.8092704799511,12.7687338085188,14.1318010595744,1.97829431595291,2.19570344645783,1.04182674111352,12.5632349550621,10.6924895906019,12.6822545654752,17.3830865429464,18.7930618654816,4.65998614563251,0.151452386666368,0.151143120213571,0,0,0,0,0,0,0.280888840263504,0,0,0,0.704217098883403,0,0,0,0,0,0,0.68510327831436,0,2.52351636410202,0.693941307064543,0.608930956624282,0,0.753613202763113,0.470354828542819,0.251333182659351,0,0,0,0,0,0,0,2.34224637609238,5.65506108396329,0,0,0,0,11.9832511523858,8.6925114535539,4.52355667606312,5.9100268865374,7.67146371990992,9.76603809429932,11.5191296778108,0.305518091550949,0,0,2.73574412652416,0.260240885925407,0.689706313300419,1.62055916824814,0.753524089178575,3.33378845841506,4.09963904911519,2.24884138943349,7.24369438069244,0.431135985865684,0.378212160335639,0.879755620819744,0.43839146485515,0,1.39300866608867,0.61734640922383,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,4.41608891984667,2.46971069710283,0,0,0.213288250535234,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0.387904974335251,0.210407459670956,0.316182685621286,0.147610147979602,0.31399745568275,0,0,0,0,0.224862112384854,0.202860121388503,0,0,0.287696137450811,0,0.274561413188081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,12.0412942490844,13.4793439581034,0,0,0.631016438832513,0.780877488593277,1.93881057959519,4.30143836314594,11.3627323782021,12.4553673547086,0,0.584511715822624,0.790575555893047,16.708708453934,0,0.178065603667255,1.30309567482861,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,5.7874732978144,0.540183282093931,0,0.428674070063185,0.354680467284547,1.42695054081656,1.64549020602121,1.522324745573,0,0,0,0,0.484393280087717,0.180938774784468,0.119372344003136,0,0.582961673259701,14.4631735568198,0,0.412773735926445,0,0,0.136694227721025,0,0,0,0,0,0.316335993581135,0,0.108005340821801,0,0,0,0.165306911450672,0,0,0,0,0,0,0,0,0,0.117357238645754,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0.0897138566094757,0,0.19318959403219,0,0.183151624267265,0,0.501572104035363,7.90652579663893,5.52390283808612,8.02053718815155,4.98374228796694,6.16574267793578,6.0431511791176,6.75022500231806,4.95353323546643,5.89085131679466,3.10656187051092,0.103787347584177,0.399024873401031,0.170733605754134,0.972426868273176,0.838452650511929,0.551530525350042,0.666740183404846,1.03017528619447,0,1.26348605881899,0.760437899670719,1.69763707247469,1.40462261204824,0.960377286073039,0.976402972245426,1.42888107384922,1.15884325944855,0.77163688185482,0.412085900803307,1.91358596174717,0,0.887379030796687,0.953744759789284,0.726732083161643,0.376437521661322,0.761531471025089,1.82927972872773,0.263069711437843,0.950628796921032,1.12228454331548,1.66089025373844,0.788035859004508,1.63692417267876,0.929621047115796,0.192906610981141,0.999242311751784,1.16965804222704,1.07435527024149,0.382576664137687,0.661774257358546,1.39120701372253 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|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0.171200729931206,0.0874204024189974,0.333109761815663,0,0,0,0,0,2.21112554392781,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0.194429899074283,0.419959264876088,0,0,0,0,0,0,0,2.22548106945558,3.70293685490423,2.53532561402472,0,0,0,0,0,8.68840320503374,8.06858441175265,0.414758449233911,0.810035629990144,0.420649922702764,18.852964970651,25.1790136684839,1.34739879136449,1.82106394934649,0,8.8092704799511,12.7687338085188,14.1318010595744,1.97829431595291,2.19570344645783,1.04182674111352,12.5632349550621,10.6924895906019,12.6822545654752,17.3830865429464,18.7930618654816,4.65998614563251,0.151452386666368,0.151143120213571,0,0,0,0,0,0,0.280888840263504,0,0,0,0.704217098883403,0,0,0,0,0,0,0.68510327831436,0,2.52351636410202,0.693941307064543,0.608930956624282,0,0.753613202763113,0.470354828542819,0.251333182659351,0,0,0,0,0,0,0,2.34224637609238,5.65506108396329,0,0,0,0,11.9832511523858,8.6925114535539,4.52355667606312,5.9100268865374,7.67146371990992,9.76603809429932,11.5191296778108,0.305518091550949,0,0,2.73574412652416,0.260240885925407,0.689706313300419,1.62055916824814,0.753524089178575,3.33378845841506,4.09963904911519,2.24884138943349,7.24369438069244,0.431135985865684,0.378212160335639,0.879755620819744,0.43839146485515,0,1.39300866608867,0.61734640922383,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,4.41608891984667,2.46971069710283,0,0,0.213288250535234,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0.387904974335251,0.210407459670956,0.316182685621286,0.147610147979602,0.31399745568275,0,0,0,0,0.224862112384854,0.202860121388503,0,0,0.287696137450811,0,0.274561413188081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,12.0412942490844,13.4793439581034,0,0,0.631016438832513,0.780877488593277,1.93881057959519,4.30143836314594,11.3627323782021,12.4553673547086,0,0.584511715822624,0.790575555893047,16.708708453934,0,0.178065603667255,1.30309567482861,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,5.7874732978144,0.540183282093931,0,0.428674070063185,0.354680467284547,1.42695054081656,1.64549020602121,1.522324745573,0,0,0,0,0.484393280087717,0.180938774784468,0.119372344003136,0,0.582961673259701,14.4631735568198,0,0.412773735926445,0,0,0.136694227721025,0,0,0,0,0,0.316335993581135,0,0.108005340821801,0,0,0,0.165306911450672,0,0,0,0,0,0,0,0,0,0.117357238645754,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0.0897138566094757,0,0.19318959403219,0,0.183151624267265,0,0.501572104035363,7.90652579663893,5.52390283808612,8.02053718815155,4.98374228796694,6.16574267793578,6.0431511791176,6.75022500231806,4.95353323546643,5.89085131679466,3.10656187051092,0.103787347584177,0.399024873401031,0.170733605754134,0.972426868273176,0.838452650511929,0.551530525350042,0.666740183404846,1.03017528619447,0,1.26348605881899,0.760437899670719,1.69763707247469,1.40462261204824,0.960377286073039,0.976402972245426,1.42888107384922,1.15884325944855,0.77163688185482,0.412085900803307,1.91358596174717,0,0.887379030796687,0.953744759789284,0.726732083161643,0.376437521661322,0.761531471025089,1.82927972872773,0.263069711437843,0.950628796921032,1.12228454331548,1.66089025373844,0.788035859004508,1.63692417267876,0.929621047115796,0.192906610981141,0.999242311751784,1.16965804222704,1.07435527024149,0.382576664137687,0.661774257358546,1.39120701372253 | ||
|short_description=p3@Lhfpl3 | |short_description=p3@Lhfpl3 | ||
}} | }} |
Latest revision as of 20:08, 25 September 2015
Short description: | p3@Lhfpl3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Lhfpl3_5end |
Coexpression cluster: | MCL_coexpression_mm9:428 |
Association with transcript: | -109bp_to_ENSMUST00000073678, ENSMUST00000115141, NM_001081231, NM_029990, uc008wpv.2, uc012dst.1_5end |
EntrezGene: | Lhfpl3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.97e-16 | 23 |
neuroblast (sensu Vertebrata) | 1.97e-16 | 23 |
neuron | 1.77e-15 | 33 |
neuronal stem cell | 1.77e-15 | 33 |
neuroblast | 1.77e-15 | 33 |
electrically signaling cell | 1.77e-15 | 33 |
neural cell | 8.02e-13 | 43 |
ectodermal cell | 2.34e-12 | 44 |
neurectodermal cell | 2.34e-12 | 44 |
electrically responsive cell | 5.28e-12 | 39 |
electrically active cell | 5.28e-12 | 39 |