FFCP PHASE1:Mm9::chr3:88420206..88420215,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=16800 | |EntrezGene=16800 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q60875 | |UniProt=Q60875 | ||
|association_with_transcript=77bp_to_NM_001198911,uc008pvu.2,uc008pvv.2_5end | |association_with_transcript=77bp_to_NM_001198911,uc008pvu.2,uc008pvv.2_5end | ||
|cluster_id=chr3:88420206..88420215,+ | |||
|description=CAGE_peak_18_at_Arhgef2_5end | |description=CAGE_peak_18_at_Arhgef2_5end | ||
|id=chr3:88420206..88420215,+ | |id=chr3:88420206..88420215,+ | ||
|ontology_enrichment_celltype=CL:0000680!1.05e-07!6;CL:0000183!1.05e-07!6;CL:0000187!1.05e-07!6;CL:0000056!1.05e-07!6 | |ontology_enrichment_celltype=CL:0000680!1.05e-07!6;CL:0000183!1.05e-07!6;CL:0000187!1.05e-07!6;CL:0000056!1.05e-07!6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002494,7.68e-33,3;CL:0000737,7.68e-33,3;CL:0000746,7.68e-33,3;CL:0000513,7.68e-33,3;CL:0000680,2.83e-29,6;CL:0000187,2.83e-29,6;CL:0000056,2.83e-29,6;CL:0000222,3.51e-25,7;CL:0000355,1.03e-19,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000383,2.62e-27,10;UBERON:0001134,1.03e-19,9;UBERON:0002036,1.03e-19,9;UBERON:0002385,1.03e-19,9;UBERON:0000486,1.03e-19,9;UBERON:0007503,1.03e-19,9;UBERON:0001015,1.03e-19,9;UBERON:0002329,1.03e-19,9;UBERON:0003082,1.03e-19,9;UBERON:0003059,1.03e-19,9;UBERON:0007282,1.03e-19,9;UBERON:0004290,1.03e-19,9;UBERON:0009618,1.03e-19,9;UBERON:0007524,3.15e-16,11;UBERON:0003077,3.15e-16,11;UBERON:0007285,3.15e-16,11;UBERON:0001374,3.34e-12,1;UBERON:0004252,3.34e-12,1;UBERON:0003663,3.34e-12,1;UBERON:0005090,3.34e-12,1;UBERON:0001630,3.34e-12,1;UBERON:0003661,3.34e-12,1;UBERON:0010890,3.34e-12,1;UBERON:0001383,3.34e-12,1;UBERON:0002204,1.01e-08,32;UBERON:0004535,5.55e-08,23;UBERON:0001009,5.55e-08,23 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38486499773135,0.608261587317087,0.734187008646726,0,0,0,0.58328969722285,0.139986421625363,0,0,0,0,1.28629718017973,1.14613375975503,1.03134418455488,0,0,0,0.338844532069132,0,0,0,0,0.599200221036809,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0.227178579999552,0.226714680320357,0,0,0,0,0,0,0.140444420131752,0.340860645156116,0,0.35333957451034,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144599356919912,0,0.485300549842228,0.220841518460394,0,0,1.75668478206928,0.628340120440365,0,0,0,0,0,0,0.251308704225729,0.173824320192276,0.255715457330331,0,0,0.407357455401265,0,0,0.210441855886474,0,0.229902104433473,0.180062129805349,0,0,0,0.0937017245597288,1.03481348295606,0,0.189106080167819,0.175951124163949,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0.23674473558521,0.196764231747404,0,0.232533944750408,0.268273401399619,0.116765342367169,0,0.164167464079095,0,0.292399974850665,0,0.134206418760372,0,0.308713837137853,0,0,0,0,0.128867461322093,0,0,0,0,0.164698954724011,0,0,0,0.898819408654221,0,0,0,0,0,0,0,0,0.126473074248515,0,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.739012760666419,0,0.162964976442026,0,0,0,0,0.390267295715598,0.630540576424764,0.664394068946325,0.478364305972461,0.327726629431476,0.172684981865896,0.144649058581512,0,0,0,0,0,0,2.45902418065013,1.26235463602186,0.315508219416257,0,0,0.238968797952552,0,0,0,0.292255857911312,0.395287777946524,0,0,0,0.651547837414304,0.494910368917606,0,0.242780636154981,0,0,0,0.307435147943927,0.258428293168221,0.363533729477506,0.356497378384721,0.316036757935816,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0.220528398054962,0,0.322928853391811,0,0,0.164140899745061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0.209088296014469,0,0,0.330613822901344,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572895513439397,0,0,0,0,0,0.453142408984205,0,0,0,0,0,0.209613162627982,0.367687016900028,0,0.206035057238894,0.320919209591815,0,0.25347929989024,0.188626341386076,0.187283014939765,0.128050304809739,0.0574354689556133,0.476293691283074,0.115884325944855,0,0,0.147198920134397,0.342869252385415,0.177475806159338,0,0,0.188218760830661,0.0846146078916765,0.365855945745545,0.263069711437843,0,0,0.118635018124174,0.29551344712669,0,0.154936841185966,0,0.249810577937946,0,0,0.57386499620653,0.220591419119515,0.927471342481686 | |phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38486499773135,0.608261587317087,0.734187008646726,0,0,0,0.58328969722285,0.139986421625363,0,0,0,0,1.28629718017973,1.14613375975503,1.03134418455488,0,0,0,0.338844532069132,0,0,0,0,0.599200221036809,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0.227178579999552,0.226714680320357,0,0,0,0,0,0,0.140444420131752,0.340860645156116,0,0.35333957451034,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144599356919912,0,0.485300549842228,0.220841518460394,0,0,1.75668478206928,0.628340120440365,0,0,0,0,0,0,0.251308704225729,0.173824320192276,0.255715457330331,0,0,0.407357455401265,0,0,0.210441855886474,0,0.229902104433473,0.180062129805349,0,0,0,0.0937017245597288,1.03481348295606,0,0.189106080167819,0.175951124163949,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0.23674473558521,0.196764231747404,0,0.232533944750408,0.268273401399619,0.116765342367169,0,0.164167464079095,0,0.292399974850665,0,0.134206418760372,0,0.308713837137853,0,0,0,0,0.128867461322093,0,0,0,0,0.164698954724011,0,0,0,0.898819408654221,0,0,0,0,0,0,0,0,0.126473074248515,0,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.739012760666419,0,0.162964976442026,0,0,0,0,0.390267295715598,0.630540576424764,0.664394068946325,0.478364305972461,0.327726629431476,0.172684981865896,0.144649058581512,0,0,0,0,0,0,2.45902418065013,1.26235463602186,0.315508219416257,0,0,0.238968797952552,0,0,0,0.292255857911312,0.395287777946524,0,0,0,0.651547837414304,0.494910368917606,0,0.242780636154981,0,0,0,0.307435147943927,0.258428293168221,0.363533729477506,0.356497378384721,0.316036757935816,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0.220528398054962,0,0.322928853391811,0,0,0.164140899745061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216010681643603,0.209088296014469,0,0,0.330613822901344,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572895513439397,0,0,0,0,0,0.453142408984205,0,0,0,0,0,0.209613162627982,0.367687016900028,0,0.206035057238894,0.320919209591815,0,0.25347929989024,0.188626341386076,0.187283014939765,0.128050304809739,0.0574354689556133,0.476293691283074,0.115884325944855,0,0,0.147198920134397,0.342869252385415,0.177475806159338,0,0,0.188218760830661,0.0846146078916765,0.365855945745545,0.263069711437843,0,0,0.118635018124174,0.29551344712669,0,0.154936841185966,0,0.249810577937946,0,0,0.57386499620653,0.220591419119515,0.927471342481686 | ||
|short_description=p18@Arhgef2 | |short_description=p18@Arhgef2 | ||
}} | }} |
Latest revision as of 20:02, 25 September 2015
Short description: | p18@Arhgef2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_18_at_Arhgef2_5end |
Coexpression cluster: | NA |
Association with transcript: | 77bp_to_NM_001198911, uc008pvu.2, uc008pvv.2_5end |
EntrezGene: | Arhgef2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiocyte | 7.68e-33 | 3 |
striated muscle cell | 7.68e-33 | 3 |
cardiac muscle cell | 7.68e-33 | 3 |
cardiac muscle myoblast | 7.68e-33 | 3 |
muscle precursor cell | 2.83e-29 | 6 |
muscle cell | 2.83e-29 | 6 |
myoblast | 2.83e-29 | 6 |
mesodermal cell | 3.51e-25 | 7 |
multi-potent skeletal muscle stem cell | 1.03e-19 | 9 |
Ontology term | p-value | n |
---|---|---|
musculature of body | 2.62e-27 | 10 |
skeletal muscle tissue | 1.03e-19 | 9 |
striated muscle tissue | 1.03e-19 | 9 |
muscle tissue | 1.03e-19 | 9 |
multilaminar epithelium | 1.03e-19 | 9 |
epithelial vesicle | 1.03e-19 | 9 |
musculature | 1.03e-19 | 9 |
somite | 1.03e-19 | 9 |
myotome | 1.03e-19 | 9 |
presomitic mesoderm | 1.03e-19 | 9 |
presumptive segmental plate | 1.03e-19 | 9 |
dermomyotome | 1.03e-19 | 9 |
trunk paraxial mesoderm | 1.03e-19 | 9 |
dense mesenchyme tissue | 3.15e-16 | 11 |
paraxial mesoderm | 3.15e-16 | 11 |
presumptive paraxial mesoderm | 3.15e-16 | 11 |
biceps femoris | 3.34e-12 | 1 |
hindlimb stylopod muscle | 3.34e-12 | 1 |
hindlimb muscle | 3.34e-12 | 1 |
muscle structure | 3.34e-12 | 1 |
muscle organ | 3.34e-12 | 1 |
limb muscle | 3.34e-12 | 1 |
pelvic complex muscle | 3.34e-12 | 1 |
muscle of leg | 3.34e-12 | 1 |
musculoskeletal system | 1.01e-08 | 32 |
cardiovascular system | 5.55e-08 | 23 |
circulatory system | 5.55e-08 | 23 |