FFCP PHASE1:Mm9::chr19:44407857..44407870,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=329065 | |EntrezGene=329065 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=10 | |||
|TSSclassifier=NA | |||
|UniProt=Q6T707 | |UniProt=Q6T707 | ||
|association_with_transcript=41bp_to_NM_183216,uc008hpq.1_5end | |||
|cluster_id=chr19:44407857..44407870,+ | |||
|description=CAGE_peak_3_at_Scd4_5end | |||
|id=chr19:44407857..44407870,+ | |||
|ontology_enrichment_celltype=CL:0002453!4.59e-08!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000128,2.80e-11,6;CL:0000126,2.80e-11,6;CL:0000127,2.80e-11,6;CL:0002453,1.32e-08,8;CL:0000333,5.44e-07,10;CL:0000095,5.44e-07,10;CL:0000243,5.44e-07,10;CL:0000123,5.44e-07,10;CL:0000125,5.44e-07,10;CL:0000030,5.44e-07,10;CL:0000339,5.44e-07,10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!3.45e-15!18;UBERON:0000948!3.45e-15!18;UBERON:0005498!3.45e-15!18;UBERON:0004140!3.45e-15!18;UBERON:0009881!3.45e-15!18;UBERON:0004141!3.45e-15!18;UBERON:0003084!3.45e-15!18;UBERON:0007005!3.45e-15!18;UBERON:0004139!3.45e-15!18;UBERON:0004291!3.45e-15!18;UBERON:0004535!9.72e-13!23;UBERON:0001009!9.72e-13!23;UBERON:0004872!9.15e-08!33;UBERON:0003103!5.19e-07!43;UBERON:0000025!6.76e-07!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.18e-32,18;UBERON:0000948,1.18e-32,18;UBERON:0005498,1.18e-32,18;UBERON:0004140,1.18e-32,18;UBERON:0009881,1.18e-32,18;UBERON:0004141,1.18e-32,18;UBERON:0003084,1.18e-32,18;UBERON:0007005,1.18e-32,18;UBERON:0004139,1.18e-32,18;UBERON:0004291,1.18e-32,18;UBERON:0004535,1.96e-25,23;UBERON:0001009,1.96e-25,23;UBERON:0004872,1.56e-17,33;UBERON:0003103,2.72e-13,43;UBERON:0003914,4.27e-12,47;UBERON:0010314,8.77e-09,92;UBERON:0000025,7.04e-07,114 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30815093828268,0.659058548203415,1.55543919259427,0,1.43752564364972,0,0,0,0,0,0,0.202316460859598,0.528990979272033,0,0,0,0,0,0,0.599200221036809,0.384218305321555,0,0,0,0.285650984403804,0.220868540951614,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247194967734374,0.144599356919912,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0680364991513279,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0.473489471170421,0.590292695242212,0.154267112887378,1.86027155800326,1.07309360559848,8.17357396570186,16.785104691175,19.5359282254123,6.72871119230603,10.6725990820493,5.26920276698522,6.1734952629771,0.210289948564127,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0.975668239288994,0.315270288212382,0,0.797273843287435,0.491589944147214,0.172684981865896,0.433947175744535,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32977250588296,0,0,0.119372344003136,0.492422699235184,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0,0,0,0.165306911450672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0,0,0.0640251524048693,0.17230640686684,0,0,0,0,0,0,0,0,0,0,0,0,0.263069711437843,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0.231867835620421 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30815093828268,0.659058548203415,1.55543919259427,0,1.43752564364972,0,0,0,0,0,0,0.202316460859598,0.528990979272033,0,0,0,0,0,0,0.599200221036809,0.384218305321555,0,0,0,0.285650984403804,0.220868540951614,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247194967734374,0.144599356919912,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0680364991513279,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0.473489471170421,0.590292695242212,0.154267112887378,1.86027155800326,1.07309360559848,8.17357396570186,16.785104691175,19.5359282254123,6.72871119230603,10.6725990820493,5.26920276698522,6.1734952629771,0.210289948564127,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0.975668239288994,0.315270288212382,0,0.797273843287435,0.491589944147214,0.172684981865896,0.433947175744535,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32977250588296,0,0,0.119372344003136,0.492422699235184,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0,0,0,0.165306911450672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0,0,0.0640251524048693,0.17230640686684,0,0,0,0,0,0,0,0,0,0,0,0,0.263069711437843,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0.231867835620421 | ||
|short_description=p3@Scd4 | |||
}} | }} |
Latest revision as of 19:57, 25 September 2015
Short description: | p3@Scd4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Scd4_5end |
Coexpression cluster: | MCL_coexpression_mm9:10 |
Association with transcript: | 41bp_to_NM_183216, uc008hpq.1_5end |
EntrezGene: | Scd4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte | 2.80e-11 | 6 |
macroglial cell | 2.80e-11 | 6 |
astrocyte | 2.80e-11 | 6 |
oligodendrocyte precursor cell | 1.32e-08 | 8 |
migratory neural crest cell | 5.44e-07 | 10 |
neuron associated cell | 5.44e-07 | 10 |
glial cell (sensu Vertebrata) | 5.44e-07 | 10 |
neuron associated cell (sensu Vertebrata) | 5.44e-07 | 10 |
glial cell | 5.44e-07 | 10 |
glioblast | 5.44e-07 | 10 |
glioblast (sensu Vertebrata) | 5.44e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 1.18e-32 | 18 |
heart | 1.18e-32 | 18 |
primitive heart tube | 1.18e-32 | 18 |
primary heart field | 1.18e-32 | 18 |
anterior lateral plate mesoderm | 1.18e-32 | 18 |
heart tube | 1.18e-32 | 18 |
heart primordium | 1.18e-32 | 18 |
cardiac mesoderm | 1.18e-32 | 18 |
cardiogenic plate | 1.18e-32 | 18 |
heart rudiment | 1.18e-32 | 18 |
cardiovascular system | 1.96e-25 | 23 |
circulatory system | 1.96e-25 | 23 |
splanchnic layer of lateral plate mesoderm | 1.56e-17 | 33 |
compound organ | 2.72e-13 | 43 |
epithelial tube | 4.27e-12 | 47 |
structure with developmental contribution from neural crest | 8.77e-09 | 92 |
tube | 7.04e-07 | 114 |