FFCP PHASE1:Mm9::chr16:89838119..89838128,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=21844 | |EntrezGene=21844 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=29 | |MCL_coexpression_id=29 | ||
|TSSclassifier=NA | |||
|UniProt=Q3TRA4 | |UniProt=Q3TRA4 | ||
|association_with_transcript=0bp_to_uc007zvt.2_5end | |association_with_transcript=0bp_to_uc007zvt.2_5end | ||
|cluster_id=chr16:89838119..89838128,- | |||
|description=CAGE_peak_23_at_Tiam1_5end | |description=CAGE_peak_23_at_Tiam1_5end | ||
|id=chr16:89838119..89838128,- | |id=chr16:89838119..89838128,- | ||
|ontology_enrichment_celltype=CL:0000624!4.55e-18!8;CL:0000791!5.28e-16!9;CL:0000789!5.28e-16!9;CL:0002420!5.28e-16!9;CL:0002419!5.28e-16!9;CL:0000790!5.28e-16!9;CL:0000084!5.37e-13!11;CL:0000827!5.37e-13!11;CL:0000838!7.24e-12!12;CL:0000893!6.31e-11!6;CL:0002489!6.31e-11!6;CL:0000898!6.31e-11!6;CL:0000809!6.31e-11!6;CL:0000810!6.31e-11!6;CL:0000895!6.31e-11!6;CL:0000808!6.31e-11!6;CL:0000894!6.31e-11!6;CL:0000806!6.31e-11!6;CL:0000807!6.31e-11!6;CL:0000805!6.31e-11!6;CL:0002425!6.31e-11!6;CL:0002436!6.31e-11!6;CL:0002427!6.31e-11!6;CL:0002428!6.31e-11!6;CL:0002429!6.31e-11!6;CL:0002433!6.31e-11!6;CL:0002431!6.31e-11!6;CL:0002432!6.31e-11!6;CL:0000542!6.54e-11!13;CL:0000051!6.54e-11!13;CL:0000738!3.31e-08!17;CL:0002087!3.31e-08!17;CL:0002031!3.15e-07!25 | |ontology_enrichment_celltype=CL:0000624!4.55e-18!8;CL:0000791!5.28e-16!9;CL:0000789!5.28e-16!9;CL:0002420!5.28e-16!9;CL:0002419!5.28e-16!9;CL:0000790!5.28e-16!9;CL:0000084!5.37e-13!11;CL:0000827!5.37e-13!11;CL:0000838!7.24e-12!12;CL:0000893!6.31e-11!6;CL:0002489!6.31e-11!6;CL:0000898!6.31e-11!6;CL:0000809!6.31e-11!6;CL:0000810!6.31e-11!6;CL:0000895!6.31e-11!6;CL:0000808!6.31e-11!6;CL:0000894!6.31e-11!6;CL:0000806!6.31e-11!6;CL:0000807!6.31e-11!6;CL:0000805!6.31e-11!6;CL:0002425!6.31e-11!6;CL:0002436!6.31e-11!6;CL:0002427!6.31e-11!6;CL:0002428!6.31e-11!6;CL:0002429!6.31e-11!6;CL:0002433!6.31e-11!6;CL:0002431!6.31e-11!6;CL:0002432!6.31e-11!6;CL:0000542!6.54e-11!13;CL:0000051!6.54e-11!13;CL:0000738!3.31e-08!17;CL:0002087!3.31e-08!17;CL:0002031!3.15e-07!25 | ||
|ontology_enrichment_celltype_v019_2=CL:0000624,2.45e-33,8;CL:0000815,2.87e-30,1;CL:0000792,2.87e-30,1;CL:0000791,8.84e-30,9;CL:0000789,8.84e-30,9;CL:0002420,8.84e-30,9;CL:0002419,8.84e-30,9;CL:0000790,8.84e-30,9;CL:0000084,1.34e-24,11;CL:0000827,1.34e-24,11;CL:0000838,1.18e-22,12;CL:0000542,5.26e-21,13;CL:0000051,5.26e-21,13;CL:0000738,2.41e-16,17;CL:0002087,2.41e-16,17;CL:0002031,1.80e-11,25;CL:0000988,3.42e-09,32;CL:0002032,3.42e-09,32;CL:0000037,3.42e-09,32;CL:0000837,3.42e-09,32 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!1.04e-09!23;UBERON:0000974!1.04e-09!23;UBERON:0004807!1.04e-09!23;UBERON:0005058!1.04e-09!23;UBERON:0003351!1.04e-09!23;UBERON:0009113!1.04e-09!23;UBERON:0003295!1.04e-09!23;UBERON:0009722!1.04e-09!23;UBERON:0005562!1.04e-09!23;UBERON:0007690!1.04e-09!23;UBERON:0004177!1.98e-09!29;UBERON:0006562!2.94e-09!24;UBERON:0003408!2.94e-09!24;UBERON:0001557!2.94e-09!24;UBERON:0001042!2.94e-09!24;UBERON:0008814!2.94e-09!24;UBERON:0009145!2.94e-09!24;UBERON:0000072!4.15e-08!27;UBERON:0002390!5.21e-07!45;UBERON:0003061!5.21e-07!45 | |ontology_enrichment_uberon=UBERON:0002370!1.04e-09!23;UBERON:0000974!1.04e-09!23;UBERON:0004807!1.04e-09!23;UBERON:0005058!1.04e-09!23;UBERON:0003351!1.04e-09!23;UBERON:0009113!1.04e-09!23;UBERON:0003295!1.04e-09!23;UBERON:0009722!1.04e-09!23;UBERON:0005562!1.04e-09!23;UBERON:0007690!1.04e-09!23;UBERON:0004177!1.98e-09!29;UBERON:0006562!2.94e-09!24;UBERON:0003408!2.94e-09!24;UBERON:0001557!2.94e-09!24;UBERON:0001042!2.94e-09!24;UBERON:0008814!2.94e-09!24;UBERON:0009145!2.94e-09!24;UBERON:0000072!4.15e-08!27;UBERON:0002390!5.21e-07!45;UBERON:0003061!5.21e-07!45 | ||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,4.13194635013044,0.563154888606667,2.10658073689794,0.171217968225505,0,0,0.174840804837995,0,0,0,0.315462165358238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45072428402269,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0,0.0958454710182364,0,0,0,0,0,0,0,0,0.56276261003168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0.173824320192276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136694227721025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,0,0,0,0,0,0,0,0,0.0762068066549998,0.100826185136841,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572895513439397,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,4.13194635013044,0.563154888606667,2.10658073689794,0.171217968225505,0,0,0.174840804837995,0,0,0,0.315462165358238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45072428402269,0,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0,0.0958454710182364,0,0,0,0,0,0,0,0,0.56276261003168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0.173824320192276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136694227721025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,0,0,0,0,0,0,0,0,0.0762068066549998,0.100826185136841,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572895513439397,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p23@Tiam1 | |short_description=p23@Tiam1 | ||
}} | }} |
Latest revision as of 19:52, 25 September 2015
Short description: | p23@Tiam1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_23_at_Tiam1_5end |
Coexpression cluster: | MCL_coexpression_mm9:29 |
Association with transcript: | 0bp_to_uc007zvt.2_5end |
EntrezGene: | Tiam1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta T cell | 2.45e-33 | 8 |
regulatory T cell | 2.87e-30 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 2.87e-30 | 1 |
mature alpha-beta T cell | 8.84e-30 | 9 |
alpha-beta T cell | 8.84e-30 | 9 |
immature T cell | 8.84e-30 | 9 |
mature T cell | 8.84e-30 | 9 |
immature alpha-beta T cell | 8.84e-30 | 9 |
T cell | 1.34e-24 | 11 |
pro-T cell | 1.34e-24 | 11 |
lymphoid lineage restricted progenitor cell | 1.18e-22 | 12 |
lymphocyte | 5.26e-21 | 13 |
common lymphoid progenitor | 5.26e-21 | 13 |
leukocyte | 2.41e-16 | 17 |
nongranular leukocyte | 2.41e-16 | 17 |
hematopoietic lineage restricted progenitor cell | 1.80e-11 | 25 |
hematopoietic cell | 3.42e-09 | 32 |
hematopoietic oligopotent progenitor cell | 3.42e-09 | 32 |
hematopoietic stem cell | 3.42e-09 | 32 |
hematopoietic multipotent progenitor cell | 3.42e-09 | 32 |