FFCP PHASE1:Mm9::chr5:20207947..20208032,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr5:20207947..20208032,+ to FFCP PHASE1:Mm9::chr5:20207947..20208032,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=50791 | |EntrezGene=50791 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=84 | |||
|TSSclassifier=NA | |||
|UniProt=F6SW67 | |UniProt=F6SW67 | ||
|association_with_transcript=-62bp_to_ENSMUST00000101556,uc008wny.1_5end | |||
|cluster_id=chr5:20207947..20208032,+ | |||
|description=CAGE_peak_3_at_Magi2_5end | |||
|id=chr5:20207947..20208032,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!5.61e-16!63;UBERON:0004121!4.14e-15!102;UBERON:0000924!4.14e-15!102;UBERON:0006601!4.14e-15!102;UBERON:0002346!8.28e-15!71;UBERON:0003075!8.28e-15!71;UBERON:0007284!8.28e-15!71;UBERON:0003056!1.97e-14!49;UBERON:0001017!8.41e-13!73;UBERON:0005743!8.41e-13!73;UBERON:0000073!3.41e-12!75;UBERON:0001016!3.41e-12!75;UBERON:0001049!6.69e-12!52;UBERON:0005068!6.69e-12!52;UBERON:0006241!6.69e-12!52;UBERON:0007135!6.69e-12!52;UBERON:0000955!1.20e-11!50;UBERON:0006238!1.20e-11!50;UBERON:0002616!3.51e-11!49;UBERON:0003080!1.05e-10!40;UBERON:0000153!1.43e-10!94;UBERON:0002780!3.01e-10!39;UBERON:0001890!3.01e-10!39;UBERON:0006240!3.01e-10!39;UBERON:0007811!4.46e-09!86;UBERON:0001894!2.50e-07!10;UBERON:0006222!2.50e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010371,2.28e-16,73;UBERON:0002346,6.51e-16,64;UBERON:0003075,6.51e-16,64;UBERON:0007284,6.51e-16,64;UBERON:0004121,1.40e-15,95;UBERON:0000924,1.40e-15,95;UBERON:0006601,1.40e-15,95;UBERON:0003056,1.47e-14,49;UBERON:0001017,5.22e-13,73;UBERON:0001016,2.17e-12,75;UBERON:0000955,3.00e-12,47;UBERON:0006238,3.00e-12,47;UBERON:0001049,5.30e-12,52;UBERON:0005068,5.30e-12,52;UBERON:0006241,5.30e-12,52;UBERON:0007135,5.30e-12,52;UBERON:0010314,6.25e-12,92;UBERON:0002616,9.13e-12,46;UBERON:0000073,2.12e-11,54;UBERON:0003080,8.55e-11,40;UBERON:0002780,2.48e-10,39;UBERON:0001890,2.48e-10,39;UBERON:0006240,2.48e-10,39;UBERON:0001894,2.20e-07,10;UBERON:0006222,2.20e-07,10 | |||
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|phase1_expression=9.28863313207805,0,0,0,0,0,0.467225281191051,2.84071311571468,1.267098499365,0.234064526321993,3.08192342805909,2.95156988282745,1.19840510951844,1.04904482902797,0,0.202475267389826,0,2.68142840554502,2.05671650408608,1.69755860719212,2.38121212422995,2.08510997521859,0.783599367416806,0.95995453676044,1.14704640533585,0,0.430761996159075,0,0,0.756090389279792,1.55211357458713,0,1.23012957516914,0,0.288851619751275,0.166234645358492,0.204169356262369,0,0,0,0,0,0,3.27331726736501,2.12891555560981,2.9367480345869,2.34717403304412,1.74420125104357,1.75748946187577,2.91644848611425,2.51975558925653,0,0.838913030288682,2.17608642603403,0.336093799142464,1.80081605225163,0.573066879877513,0,3.64169629547276,2.64495489636016,4.43681982454325,2.71075625655306,0,0.899899717281399,0,0,2.09720077362883,2.30530983192933,4.45865332926454,6.07526722492608,5.46844899513593,2.28520787523043,3.53389665522582,4.89963196859816,5.75072826109418,4.5960939330501,1.10115880999389,3.95830748064082,2.4577045320999,5.27545150920775,5.39777097254217,4.68822033501084,2.23346399201105,3.93933827022176,4.12555268997387,3.24091444021034,2.13557521198654,3.72798891650601,2.27178579999552,1.13357340160178,1.73918693221007,0,0,0,0,0.448026887097336,1.82577746171277,2.89731548382698,5.19572009205738,2.12003744706204,7.18301440861071,1.28326477414318,0,7.11066703153331,0.216491041011214,0.760079596425296,0.505524445014783,0.79928715803342,2.07150306917737,2.9688427812965,1.56136794089522,2.43572382649713,1.15307748628029,1.95939432718409,4.11560474974967,3.39299796590124,2.22475470960936,4.19338135067744,0.884610551949874,5.50007289821191,1.76673214768315,1.45462575940567,5.59175283654366,7.31951992528868,4.81727425670947,0.766371165625774,2.75574786363617,3.59941638596045,2.03312363316904,5.39246301857362,5.03250663100489,4.77486538028885,3.99795936442236,5.11430914660661,6.64921742590592,4.2182728397617,4.58277137326423,2.11491850037158,2.0217820674694,1.47309299120532,5.59517904739626,5.28774840196988,6.12211241338187,7.83665052745718,9.32100038373192,9.09607414022434,8.05834831213668,4.39795730256327,0.646703978798527,3.21480336285293,6.33424046990216,6.35667624039967,5.00485048606076,5.2237824978325,4.93877127379064,3.38358253591438,2.80885274925294,0.257347907114715,0.284163499395593,1.24275463521301,1.40715635988658,1.80062061461015,2.84093682702252,2.36117078096885,2.31400669331067,2.55787339225449,1.07309360559848,2.21854150497622,2.13927804887525,2.79084688934462,2.99954595319666,2.19299981137998,2.19550115291051,2.14730270016595,3.78521907415429,6.68879980465349,0,1.05780226665418,2.98603550749328,5.57368012465052,3.09281907173024,1.61346819698674,2.89091456998331,1.71203063501303,0.474529061544512,1.64698954724011,2.01068167040216,3.58121649674071,1.75467678407208,0.898819408654221,0.648414149624083,0.398282546508734,2.65535061334314,2.39921876480431,2.25415471346161,3.05476991767971,3.49114476901726,3.08597607517402,2.21327879934901,2.65698266363284,1.72698600625512,2.22114895059241,0.296452627087149,0.667380422864376,0.393117990226406,0.449724224769707,0.405720242777006,0.72353147925725,2.03700681425136,1.43848068725405,0.648540907100142,1.37280706594041,0,1.86070473834252,1.5601883655728,0.505157755894224,0.179397413521912,0.482443521363367,4.98833613449833,2.4633883530163,2.11854469374634,2.8856664581782,3.75504397261603,4.35516269348721,5.71304738126433,3.12213836572478,4.25614889086716,4.4292937929755,3.6674596791222,3.76885623846197,3.28101465545202,3.90552458170081,1.50791283939272,0.54390568381871,0.983528546038072,0.551873492609465,4.17431533968259,4.45404409050372,1.47541450839008,2.01976741763498,3.47059041357882,1.56175497718655,4.52389135238878,2.62865677747807,5.56996685205985,2.54768877709949,3.23848561339915,2.92255857911312,5.13874111330481,5.46246237917072,4.40014264145633,2.13678724400706,5.53815661802159,3.79431282836832,1.32745138339963,3.15614827001476,0.906970670894253,0.754420319023592,2.06711325016541,0.922305443831782,2.06742634534577,2.90826983582004,2.49548164869305,1.26414703174326,1.05418608574999,0,37.1079170271629,5.40183282093931,7.24408629183425,6.00143698088458,9.57637261668277,10.8804978737263,12.0120785039548,11.2652031172402,1.40803024838226,1.0591603543191,0.220528398054962,3.46261131177108,3.22928853391811,3.79971427047382,2.26807453605959,4.76008609260678,0.582961673259701,3.33765543618917,1.70870880797853,1.65109494370578,2.77791791054568,1.69531611304222,0.820165366326151,0.686334519619568,2.20971958992012,2.09927178485487,3.31679937130617,2.86401185404534,3.16335993581135,4.26970880966382,2.80813886136683,2.29997125615916,3.71216358368502,2.96701562046606,4.46328660916814,1.30877970992015,1.55537967950151,0.621339313086926,0.56369293868419,4.33597983527538,3.30916980914195,3.11121901350476,4.26227417476513,4.73077151374179,7.27614879603675,7.42164993610516,5.24296722128554,3.14059357073808,2.30424005006292,0.948033361884535,3.04087822935246,2.87590680061516,1.4291290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| ||
|short_description=p3@Magi2 | |||
}} | }} |
Latest revision as of 19:47, 25 September 2015
Short description: | p3@Magi2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Magi2_5end |
Coexpression cluster: | MCL_coexpression_mm9:84 |
Association with transcript: | -62bp_to_ENSMUST00000101556, uc008wny.1_5end |
EntrezGene: | Magi2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ecto-epithelium | 2.28e-16 | 73 |
neurectoderm | 6.51e-16 | 64 |
neural plate | 6.51e-16 | 64 |
presumptive neural plate | 6.51e-16 | 64 |
ectoderm-derived structure | 1.40e-15 | 95 |
ectoderm | 1.40e-15 | 95 |
presumptive ectoderm | 1.40e-15 | 95 |
pre-chordal neural plate | 1.47e-14 | 49 |
central nervous system | 5.22e-13 | 73 |
nervous system | 2.17e-12 | 75 |
brain | 3.00e-12 | 47 |
future brain | 3.00e-12 | 47 |
neural tube | 5.30e-12 | 52 |
neural rod | 5.30e-12 | 52 |
future spinal cord | 5.30e-12 | 52 |
neural keel | 5.30e-12 | 52 |
structure with developmental contribution from neural crest | 6.25e-12 | 92 |
regional part of brain | 9.13e-12 | 46 |
regional part of nervous system | 2.12e-11 | 54 |
anterior neural tube | 8.55e-11 | 40 |
regional part of forebrain | 2.48e-10 | 39 |
forebrain | 2.48e-10 | 39 |
future forebrain | 2.48e-10 | 39 |
diencephalon | 2.20e-07 | 10 |
future diencephalon | 2.20e-07 | 10 |