Personal tools

FFCP PHASE1:Mm9::chr5:19413320..19413369,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
 
(7 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr5:19413320..19413369,+
|DHSsupport=NA
|short_description=p2@Magi2
|DPIdataset=NA
|description=CAGE_peak_2_at_Magi2_5end
|association_with_transcript=0bp_to_ENSMUST00000101558,NM_001170745,NM_015823,uc008wnv.2,uc008wnw.2_5end
|EntrezGene=50791
|EntrezGene=50791
|HGNC=
|HGNC=
|MCL_coexpression_id=2
|TSSclassifier=NA
|UniProt=Q9WVQ1
|UniProt=Q9WVQ1
|association_with_transcript=0bp_to_ENSMUST00000101558,NM_001170745,NM_015823,uc008wnv.2,uc008wnw.2_5end
|cluster_id=chr5:19413320..19413369,+
|description=CAGE_peak_2_at_Magi2_5end
|id=chr5:19413320..19413369,+
|ontology_enrichment_celltype=CL:0000117!9.41e-14!23;CL:0000337!9.41e-14!23;CL:0000540!3.41e-10!33;CL:0000047!3.41e-10!33;CL:0000031!3.41e-10!33;CL:0000404!3.41e-10!33;CL:0000221!2.65e-07!44;CL:0000133!2.65e-07!44;CL:0002319!4.00e-07!43;CL:0000393!7.33e-07!39;CL:0000211!7.33e-07!39
|ontology_enrichment_celltype_v019_2=CL:0000117,1.34e-16,23;CL:0000337,1.34e-16,23;CL:0000540,2.35e-10,33;CL:0000047,2.35e-10,33;CL:0000031,2.35e-10,33;CL:0000404,2.35e-10,33;CL:0000393,1.77e-07,39;CL:0000211,1.77e-07,39;CL:0000221,8.61e-07,44;CL:0000133,8.61e-07,44
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!1.65e-26!71;UBERON:0003075!1.65e-26!71;UBERON:0007284!1.65e-26!71;UBERON:0000033!6.68e-26!63;UBERON:0003056!1.69e-25!49;UBERON:0001049!3.34e-25!52;UBERON:0005068!3.34e-25!52;UBERON:0006241!3.34e-25!52;UBERON:0007135!3.34e-25!52;UBERON:0000955!2.83e-24!50;UBERON:0006238!2.83e-24!50;UBERON:0001017!7.62e-24!73;UBERON:0005743!7.62e-24!73;UBERON:0002616!1.29e-23!49;UBERON:0003080!1.20e-22!40;UBERON:0000073!2.09e-22!75;UBERON:0001016!2.09e-22!75;UBERON:0002780!4.98e-22!39;UBERON:0001890!4.98e-22!39;UBERON:0006240!4.98e-22!39;UBERON:0002020!6.74e-22!34;UBERON:0004121!3.60e-20!102;UBERON:0000924!3.60e-20!102;UBERON:0006601!3.60e-20!102;UBERON:0002791!4.68e-19!29;UBERON:0003528!4.68e-19!29;UBERON:0001893!4.68e-19!29;UBERON:0000153!9.36e-16!94;UBERON:0007811!6.28e-15!86;UBERON:0000956!1.77e-14!21;UBERON:0001869!1.77e-14!21;UBERON:0000203!1.77e-14!21;UBERON:0002619!4.31e-12!17;UBERON:0002021!3.52e-09!10;UBERON:0000411!3.52e-09!10;UBERON:0001950!3.52e-09!10
|ontology_enrichment_uberon_v019_2=UBERON:0003056,2.76e-29,49;UBERON:0002346,5.41e-29,64;UBERON:0003075,5.41e-29,64;UBERON:0007284,5.41e-29,64;UBERON:0000073,2.67e-28,54;UBERON:0001049,1.51e-26,52;UBERON:0005068,1.51e-26,52;UBERON:0006241,1.51e-26,52;UBERON:0007135,1.51e-26,52;UBERON:0002020,9.97e-26,34;UBERON:0003080,1.01e-25,40;UBERON:0002780,5.79e-25,39;UBERON:0001890,5.79e-25,39;UBERON:0006240,5.79e-25,39;UBERON:0010371,1.56e-24,73;UBERON:0001017,2.05e-23,73;UBERON:0000955,2.44e-23,47;UBERON:0006238,2.44e-23,47;UBERON:0002616,1.44e-22,46;UBERON:0001016,3.12e-22,75;UBERON:0003528,3.21e-22,29;UBERON:0002791,3.21e-22,29;UBERON:0001893,3.21e-22,29;UBERON:0004121,2.53e-21,95;UBERON:0000924,2.53e-21,95;UBERON:0006601,2.53e-21,95;UBERON:0000956,1.43e-16,21;UBERON:0001869,1.43e-16,21;UBERON:0000203,1.43e-16,21;UBERON:0010314,3.22e-15,92;UBERON:0002619,1.25e-13,17;UBERON:0002021,5.85e-11,10;UBERON:0000411,5.85e-11,10;UBERON:0001950,5.85e-11,10;UBERON:0002420,8.64e-07,8;UBERON:0007245,8.64e-07,8;UBERON:0010009,8.64e-07,8;UBERON:0010011,8.64e-07,8;UBERON:0000454,8.64e-07,8
|phase1_expression=1.28119077683835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.69790044012167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,1.75748946187577,0.388859798148567,0.279972843250725,0,0,0,0,0,0,0,10.5204559646991,6.87688273053643,12.0427966666174,0,0,0,0,0,0,0,10.3689612308478,7.42532660824299,7.57169860864975,5.42736870367227,4.8591079009355,12.6165523191403,10.8305382250607,11.9498442259303,6.60695285996332,7.66124028511126,7.83393319606842,15.8263545276233,12.9912453915422,15.6274011167028,3.07101298901519,5.06486349028512,7.79271063661732,13.258286346315,16.3727432918968,16.2167517868012,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,1.97180787687353,0,0,0,0,0,0,0.79928715803342,0,0.29688427812965,0.693941307064543,0.913396434936424,0,0.150722640552623,0.587943535678524,0.125666591329675,0,0,0,2.42650274921114,4.19598885074748,9.21262980956922,0,0.878342391034642,0.41889341362691,0,0,0,0,8.23848516726525,40.7175536508578,22.3664746760899,53.0164176586443,75.6917753697778,8.72709787150152,29.2034273521964,0.101839363850316,5.349499736234,0,1.05220927943237,2.47228841629137,3.21862946206862,2.70093194708024,4.67184935290717,6.66757691683013,9.09607414022434,5.34099829990454,4.39795730256327,0.431135985865684,1.13463648100692,2.81521798662318,1.09597866213787,1.94633074457919,1.74126083261083,0.823128545631774,2.7864797354589,0,0,0,0.414251545071004,0.469052119962192,0.540186184383045,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,29.0200129018496,16.1560241435477,0,0.264450566663544,2.13288250535234,2.78684006232526,0.515469845288373,0.403367049246685,0,0.760902504450237,0,0,0,0.198956472041151,0.19496408711912,0,0.216138049874694,0,0,0.228497025219458,0,0.203651327845314,0,0.350679099451593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.757965647081939,1.62964976442026,1.69745085775188,1.17345124144251,0.167506257441816,0,0.195133647857799,0,0,0,0,0,0,1.50791283939272,0,0,0,3.05046120976805,2.93029216480508,0,0.252470927204373,1.26203287766503,0.780877488593277,0,0,0.222798674082394,0,0,0.292255857911312,0.790575555893047,8.9969968598106,0,2.49291845134157,2.76907830901079,0,0,0,0,0.188605079755898,0,0,0.258428293168221,0,0,0,0,0,7.48967132658334,3.6012218806262,1.55230420539305,2.57204442037911,5.14286677562593,4.63758925765383,2.30368628842969,0.608929898229199,0,0,0,0,0,0.0603129249281559,0,0,0,3.8939313422207,0,0.412773735926445,0,0,0,0,0,0,0,0,1.89801596148681,0.813277868507395,0.432021363287205,1.04544148007234,0.655087691238533,0,0,0,0.129614973291793,0,0,0,0,0.194451188344048,0.129159823477731,0.168956125490778,0.117357238645754,0,0,0,0,0,0.608175645870493,0.205421914329655,0.129920822977795,0.179026695667481,0,0,0,0.100966449948148,0.0762068066549998,0,0,0.0962118416403295,0,0,0,0,0,0,0,0.183151624267265,0,0,70.5939803271333,60.7629312189474,79.0595808546367,42.2758828565471,60.2872617398165,73.2732080468009,72.2274075248032,73.8526773287722,68.8776461655991,66.2733199042329,1.764384908931,6.3843979744165,4.95127456686989,6.32077464377565,3.77303692730368,3.49302666055027,5.11167473943715,7.2112270033613,6.4183841918363,6.82282471762253,6.59046179714623,8.48818536237343,6.46126401542189,6.78666615491614,6.60507892989553,5.23923060411381,6.48952225291191,5.01563973205633,4.12085900803307,7.21274708658547,9.94320831917705,6.56660482789549,6.43777712857767,7.99405291477807,6.68176600948847,5.83840794452568,6.40247905054704,7.62902163169744,6.11118512306378,8.41713407486608,5.69448086996036,4.33419722452479,6.95692773388472,5.42278944150881,3.47231899766054,7.49431733813838,3.97683734357194,2.79332370262788,0.57386499620653,2.20591419119516,3.94175320554716
|phase1_expression=1.28119077683835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.69790044012167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,1.75748946187577,0.388859798148567,0.279972843250725,0,0,0,0,0,0,0,10.5204559646991,6.87688273053643,12.0427966666174,0,0,0,0,0,0,0,10.3689612308478,7.42532660824299,7.57169860864975,5.42736870367227,4.8591079009355,12.6165523191403,10.8305382250607,11.9498442259303,6.60695285996332,7.66124028511126,7.83393319606842,15.8263545276233,12.9912453915422,15.6274011167028,3.07101298901519,5.06486349028512,7.79271063661732,13.258286346315,16.3727432918968,16.2167517868012,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,1.97180787687353,0,0,0,0,0,0,0.79928715803342,0,0.29688427812965,0.693941307064543,0.913396434936424,0,0.150722640552623,0.587943535678524,0.125666591329675,0,0,0,2.42650274921114,4.19598885074748,9.21262980956922,0,0.878342391034642,0.41889341362691,0,0,0,0,8.23848516726525,40.7175536508578,22.3664746760899,53.0164176586443,75.6917753697778,8.72709787150152,29.2034273521964,0.101839363850316,5.349499736234,0,1.05220927943237,2.47228841629137,3.21862946206862,2.70093194708024,4.67184935290717,6.66757691683013,9.09607414022434,5.34099829990454,4.39795730256327,0.431135985865684,1.13463648100692,2.81521798662318,1.09597866213787,1.94633074457919,1.74126083261083,0.823128545631774,2.7864797354589,0,0,0,0.414251545071004,0.469052119962192,0.540186184383045,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,29.0200129018496,16.1560241435477,0,0.264450566663544,2.13288250535234,2.78684006232526,0.515469845288373,0.403367049246685,0,0.760902504450237,0,0,0,0.198956472041151,0.19496408711912,0,0.216138049874694,0,0,0.228497025219458,0,0.203651327845314,0,0.350679099451593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.757965647081939,1.62964976442026,1.69745085775188,1.17345124144251,0.167506257441816,0,0.195133647857799,0,0,0,0,0,0,1.50791283939272,0,0,0,3.05046120976805,2.93029216480508,0,0.252470927204373,1.26203287766503,0.780877488593277,0,0,0.222798674082394,0,0,0.292255857911312,0.790575555893047,8.9969968598106,0,2.49291845134157,2.76907830901079,0,0,0,0,0.188605079755898,0,0,0.258428293168221,0,0,0,0,0,7.48967132658334,3.6012218806262,1.55230420539305,2.57204442037911,5.14286677562593,4.63758925765383,2.30368628842969,0.608929898229199,0,0,0,0,0,0.0603129249281559,0,0,0,3.8939313422207,0,0.412773735926445,0,0,0,0,0,0,0,0,1.89801596148681,0.813277868507395,0.432021363287205,1.04544148007234,0.655087691238533,0,0,0,0.129614973291793,0,0,0,0,0.194451188344048,0.129159823477731,0.168956125490778,0.117357238645754,0,0,0,0,0,0.608175645870493,0.205421914329655,0.129920822977795,0.179026695667481,0,0,0,0.100966449948148,0.0762068066549998,0,0,0.0962118416403295,0,0,0,0,0,0,0,0.183151624267265,0,0,70.5939803271333,60.7629312189474,79.0595808546367,42.2758828565471,60.2872617398165,73.2732080468009,72.2274075248032,73.8526773287722,68.8776461655991,66.2733199042329,1.764384908931,6.3843979744165,4.95127456686989,6.32077464377565,3.77303692730368,3.49302666055027,5.11167473943715,7.2112270033613,6.4183841918363,6.82282471762253,6.59046179714623,8.48818536237343,6.46126401542189,6.78666615491614,6.60507892989553,5.23923060411381,6.48952225291191,5.01563973205633,4.12085900803307,7.21274708658547,9.94320831917705,6.56660482789549,6.43777712857767,7.99405291477807,6.68176600948847,5.83840794452568,6.40247905054704,7.62902163169744,6.11118512306378,8.41713407486608,5.69448086996036,4.33419722452479,6.95692773388472,5.42278944150881,3.47231899766054,7.49431733813838,3.97683734357194,2.79332370262788,0.57386499620653,2.20591419119516,3.94175320554716
|short_description=p2@Magi2
}}
}}

Latest revision as of 19:44, 25 September 2015

Short description:p2@Magi2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Magi2_5end
Coexpression cluster:MCL_coexpression_mm9:2
Association with transcript: 0bp_to_ENSMUST00000101558, NM_001170745, NM_015823, uc008wnv.2, uc008wnw.2_5end
EntrezGene:Magi2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Magi2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.28
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A35.70
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.76
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C310.52
Mouse Granule cells, donor2.CNhs12357.11731-123E36.88
Mouse Granule cells, donor3.CNhs12108.11636-122C712.04
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D510.37
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F57.43
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D97.57
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F15.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54.86
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D212.62
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F210.83
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D611.95
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D36.61
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F37.66
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D77.83
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D415.83
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F412.99
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D815.63
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.07
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E55.06
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I67.79
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D613.26
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F616.37
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E116.22
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.97
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.80
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.69
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.59
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F52.43
bone (os femoris), neonate N16.CNhs11225.1525-43A64.20
bone (os femoris), neonate N20.CNhs11195.1350-25C39.21
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.88
cerebellum, neonate N30.CNhs11135.1395-42I20.42
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A48.24
corpus striatum, adult.CNhs10487.19-21D840.72
corpus striatum, neonate N00.CNhs11226.630-43F122.37
cortex, adult.CNhs10473.12-14D553.02
cortex, neonate N30.CNhs11107.1392-42F275.69
diencephalon, adult.CNhs10482.20-12F28.73
diencephalon, neonate N30.CNhs11201.1388-42B229.20
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A25.35
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G41.05
eyeball, embryo E12.CNhs11016.345-16C62.47
eyeball, embryo E14.CNhs10521.399-16E23.22
eyeball, embryo E15.CNhs10593.426-16C92.70
eyeball, embryo E17.CNhs11023.1261-18D44.67
eyeball, neonate N00.CNhs11207.633-15C66.67
eyeball, neonate N01.CNhs11140.1532-43E79.10
eyeball, neonate N02.CNhs11205.1551-44G85.34
eyeball, neonate N16.CNhs11188.777-19A24.40
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H21.13
forelimb, embryo E13.CNhs10589.384-1E22.82
forelimb, embryo E14.CNhs10577.413-26A81.10
forelimb, embryo E15.CNhs11007.437-20E71.95
forelimb, embryo E17.CNhs10598.1517-43C41.74
forelimb, embryo E18.CNhs11008.1520-43B50.82
gonad, embryo E13.CNhs11044.1564-45I62.79
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E829.02
hippocampus, neonate N00.CNhs11228.627-43G116.16
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I52.13
intestine, embryo E13.CNhs11010.381-16D52.79
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.35
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.76
lung, embryo E14.CNhs10604.404-26F81.63
lung, embryo E15.CNhs11020.432-17C51.70
lung, embryo E16.CNhs10998.458-17B61.17
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C23.05
medulla oblongata, neonate N30.CNhs11200.1396-42A32.93
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I99.00
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H72.49
ovary, neonate N00.CNhs11217.1299-22I42.77
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G87.49
pituitary gland, embryo E12.CNhs11018.346-16E63.60
pituitary gland, embryo E13.CNhs11009.370-44C71.55
pituitary gland, embryo E14.CNhs11037.398-44A52.57
pituitary gland, embryo E15.CNhs10592.427-16B95.14
pituitary gland, embryo E16.CNhs11036.449-43F64.64
pituitary gland, embryo E17.CNhs11039.1265-44F52.30
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C93.89
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.90
stomach, embryo E15.CNhs10603.1252-16G80.81
stomach, embryo E16.CNhs11022.459-17D40.43
stomach, embryo E17.CNhs11006.1035-18D51.05
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A170.59
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A260.76
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A379.06
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D742.28
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A460.29
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A573.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A672.23
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A773.85
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A868.88
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A966.27
whole body, embryo E11.CNhs11014.324-5I81.76
whole body, embryo E12.CNhs10587.857-27C96.38
whole body, embryo E13.CNhs10512.372-23H24.95
whole body, embryo E14.5.CNhs10578.420-27D26.32
whole body, embryo E14.CNhs10519.395-14B13.77
whole body, embryo E16.CNhs10514.453-14F23.49
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G55.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G57.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G56.42
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G56.82
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G56.59
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G58.49
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G56.46
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G56.79
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G56.61
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G55.24
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G56.49
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G55.02
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.12
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G57.21
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G59.94
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G56.57
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G56.44
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G57.99
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G56.68
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G55.84
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G56.40
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G57.63
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G56.11
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G58.42
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G55.69
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G54.33
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G56.96
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G55.42
whole body, embryo E17.5.CNhs10513.490-9F93.47
whole body, embryo E17.CNhs10517.475-3I57.49
whole body, embryo E18.CNhs10516.493-3B33.98
whole body, neonate N00.CNhs10525.657-19C22.79
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D12.21
whole body, neonate N10.CNhs10518.761-6B43.94





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
pre-chordal neural plate2.76e-2949
neurectoderm5.41e-2964
neural plate5.41e-2964
presumptive neural plate5.41e-2964
regional part of nervous system2.67e-2854
neural tube1.51e-2652
neural rod1.51e-2652
future spinal cord1.51e-2652
neural keel1.51e-2652
gray matter9.97e-2634
anterior neural tube1.01e-2540
regional part of forebrain5.79e-2539
forebrain5.79e-2539
future forebrain5.79e-2539
ecto-epithelium1.56e-2473
central nervous system2.05e-2373
brain2.44e-2347
future brain2.44e-2347
regional part of brain1.44e-2246
nervous system3.12e-2275
brain grey matter3.21e-2229
regional part of telencephalon3.21e-2229
telencephalon3.21e-2229
ectoderm-derived structure2.53e-2195
ectoderm2.53e-2195
presumptive ectoderm2.53e-2195
cerebral cortex1.43e-1621
cerebral hemisphere1.43e-1621
pallium1.43e-1621
structure with developmental contribution from neural crest3.22e-1592
regional part of cerebral cortex1.25e-1317
occipital lobe5.85e-1110
visual cortex5.85e-1110
neocortex5.85e-1110
basal ganglion8.64e-078
nuclear complex of neuraxis8.64e-078
aggregate regional part of brain8.64e-078
collection of basal ganglia8.64e-078
cerebral subcortex8.64e-078
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr5:19413320..19413369,%2B&oldid=4210453"