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FFCP PHASE1:Mm9::chr16:88290444..88290471,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr16:88290444..88290471,-
|DHSsupport=NA
|short_description=p1@Grik1
|DPIdataset=NA
|description=CAGE_peak_1_at_Grik1_5end
|association_with_transcript=31bp_to_NM_010348,NM_146072,uc007zur.2,uc007zus.2,uc007zuv.2,uc007zuw.2,uc007zux.2_5end
|EntrezGene=14805
|EntrezGene=14805
|HGNC=
|HGNC=
|MCL_coexpression_id=1702
|TSSclassifier=NA
|UniProt=Q3UZT1,Q8BQZ0,Q8BRT2,Q8C9A0,Q60934
|UniProt=Q3UZT1,Q8BQZ0,Q8BRT2,Q8C9A0,Q60934
|association_with_transcript=31bp_to_NM_010348,NM_146072,uc007zur.2,uc007zus.2,uc007zuv.2,uc007zuw.2,uc007zux.2_5end
|cluster_id=chr16:88290444..88290471,-
|description=CAGE_peak_1_at_Grik1_5end
|id=chr16:88290444..88290471,-
|ontology_enrichment_celltype=CL:0000540!9.87e-18!33;CL:0000047!9.87e-18!33;CL:0000031!9.87e-18!33;CL:0000404!9.87e-18!33;CL:0000221!1.18e-13!44;CL:0000133!1.18e-13!44;CL:0002319!1.88e-13!43;CL:0000393!8.33e-12!39;CL:0000211!8.33e-12!39;CL:0000117!1.15e-11!23;CL:0000337!1.15e-11!23;CL:0000055!1.05e-08!50
|ontology_enrichment_celltype_v019_2=CL:0000540,1.46e-20,33;CL:0000047,1.46e-20,33;CL:0000031,1.46e-20,33;CL:0000404,1.46e-20,33;CL:0000221,2.24e-15,44;CL:0000133,2.24e-15,44;CL:0002319,3.89e-15,43;CL:0000393,5.42e-15,39;CL:0000211,5.42e-15,39;CL:0000117,1.97e-13,23;CL:0000337,1.97e-13,23;CL:0000107,1.40e-07,9
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!1.14e-27!75;UBERON:0001016!1.14e-27!75;UBERON:0001017!2.11e-27!73;UBERON:0005743!2.11e-27!73;UBERON:0004121!3.87e-23!102;UBERON:0000924!3.87e-23!102;UBERON:0006601!3.87e-23!102;UBERON:0002346!1.55e-19!71;UBERON:0003075!1.55e-19!71;UBERON:0007284!1.55e-19!71;UBERON:0000033!6.68e-18!63;UBERON:0001049!1.46e-17!52;UBERON:0005068!1.46e-17!52;UBERON:0006241!1.46e-17!52;UBERON:0007135!1.46e-17!52;UBERON:0000955!4.30e-16!50;UBERON:0006238!4.30e-16!50;UBERON:0002616!1.96e-15!49;UBERON:0003056!6.60e-15!49;UBERON:0002020!8.86e-14!34;UBERON:0003080!7.24e-13!40;UBERON:0002780!1.97e-12!39;UBERON:0001890!1.97e-12!39;UBERON:0006240!1.97e-12!39;UBERON:0002791!2.21e-10!29;UBERON:0003528!2.21e-10!29;UBERON:0001893!2.21e-10!29;UBERON:0000153!7.39e-10!94;UBERON:0007811!1.15e-09!86;UBERON:0000468!1.91e-08!333;UBERON:0000956!3.49e-07!21;UBERON:0001869!3.49e-07!21;UBERON:0000203!3.49e-07!21;UBERON:0002021!5.78e-07!10;UBERON:0000411!5.78e-07!10;UBERON:0001950!5.78e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0001016,8.65e-32,75;UBERON:0001017,1.80e-31,73;UBERON:0004121,3.65e-28,95;UBERON:0000924,3.65e-28,95;UBERON:0006601,3.65e-28,95;UBERON:0002346,2.20e-24,64;UBERON:0003075,2.20e-24,64;UBERON:0007284,2.20e-24,64;UBERON:0000073,1.13e-21,54;UBERON:0010371,2.79e-21,73;UBERON:0001049,4.88e-20,52;UBERON:0005068,4.88e-20,52;UBERON:0006241,4.88e-20,52;UBERON:0007135,4.88e-20,52;UBERON:0003056,1.16e-16,49;UBERON:0000955,2.80e-16,47;UBERON:0006238,2.80e-16,47;UBERON:0002020,6.53e-16,34;UBERON:0002616,1.56e-15,46;UBERON:0003080,7.71e-15,40;UBERON:0002780,2.50e-14,39;UBERON:0001890,2.50e-14,39;UBERON:0006240,2.50e-14,39;UBERON:0010314,2.19e-12,92;UBERON:0003528,6.40e-12,29;UBERON:0002791,6.40e-12,29;UBERON:0001893,6.40e-12,29;UBERON:0000956,3.62e-08,21;UBERON:0001869,3.62e-08,21;UBERON:0000203,3.62e-08,21;UBERON:0002021,6.49e-08,10;UBERON:0000411,6.49e-08,10;UBERON:0001950,6.49e-08,10;UBERON:0002410,1.40e-07,9;UBERON:0000010,1.78e-07,11;UBERON:0002619,2.85e-07,17
|phase1_expression=16.0148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.40173160604279,0,0,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0.194429899074283,0.279972843250725,0,0,0,0,0,0,0,16.3876333296274,22.7466121086974,19.6487735086916,0,0,0,0,0,1.19840044207362,1.53687322128622,1.55534418462716,4.18518408828241,3.57552434297349,24.5659846587271,27.8294361599033,4.77714116938321,3.45043695665651,6.43453150627015,16.5173821499083,17.6208526557559,13.5173749265494,11.6059933202571,14.1805847583735,14.0646610050325,14.2383329490704,7.87867654044352,14.2102370432433,43.0157734791555,49.6877165988869,26.2823218613674,1.66597625333005,3.6274348851257,0,0,0,0,0,0,0.983110940922263,0,0,0,4.64783285263046,0,0,0,0,0,0,0.5709193985953,0,0,0.867426633830679,2.13125834818499,0.230615497256059,1.05505848386836,0.823120949949934,0,0,0,0,0.323533699894818,0,0,0,12.8823550685081,10.0534419270458,0,0,0,0,11.3840885947665,8.23501085073528,7.03664371832041,14.6012428961512,10.9957646652042,12.8828587626927,9.40999325792994,4.17541391786297,0,0.252722758433675,22.7277204357392,4.03373373184381,0.919608417733892,2.16074555766419,4.52114453507145,1.97305847538851,3.33095672740609,4.02917415606834,46.5666067330228,1.72454394346274,1.70195472151037,1.05570674498369,0.657587197282725,1.66828349535359,1.39300866608867,4.52720700097476,9.75267907410617,0,0,0,0.828503090142008,0.234526059981096,0.540186184383045,0.946978942340841,0.393528463494808,0.154267112887378,0.232533944750408,0,0.350296027101508,0.16455984991348,0,0.243206428637567,0,0,0,12.1968170167194,8.12946437796347,0,0.528901133327089,2.13288250535234,1.39342003116263,1.54640953586512,1.4117846723634,0.667134131534611,0.951128130562796,1.42358718463353,1.31759163779209,0.754005626400808,0.596869416123452,1.16978452271472,0.898819408654221,0,0.597423819763102,0.948339504765408,1.5994791765362,2.25415471346161,1.62921062276251,2.13347735884388,0.911765658574141,1.20149420536089,0,0.31399745568275,0,0,0.667380422864376,0.196558995113203,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0.369506380333209,1.32643988239339,0.488894929326078,0.169745085775188,0.234690248288502,0.167506257441816,0.714130922658041,0,0.315270288212382,0.44292937929755,0.956728611944923,0.163863314715738,0,0.144649058581512,0,0,0,0,15.2523060488402,9.96299336033727,0,0,18.6149849455591,24.2072021463916,16.1567548299599,10.7535959078648,13.1451217708613,15.0030561318081,19.02610297872,21.0424217696145,16.2067988958075,21.8498495166829,0.141940085208269,8.369083372361,8.47012188638596,0.164970122972535,0,7.28341908464944,3.32555912661226,3.20628635585027,1.18120757152309,3.68922177532713,0.775284879504663,1.45413491791002,0.356497378384721,0.316036757935816,0,0,5.44703369206061,1.62054984628179,1.55230420539305,2.35770738534752,1.41872186913819,5.35106452806212,11.5184314421485,9.13394847343798,0.23467170806371,0,0.220528398054962,1.81374878235628,0.161464426695906,0.301564624640779,0.119372344003136,0,0.291480836629851,10.198391610578,0,1.65109494370578,0.925972636848558,0.376736914009382,0,0.228778173206523,0,0,0,0,1.58167996790568,5.28630614529807,3.24016022465404,3.13632444021703,1.74690050996942,1.61837215661785,1.1571483801547,0.785267825952089,0.259229946583586,0,0,1.49516546043979,0.992750942742586,1.36115831840833,0.645799117388655,0.506868376472335,0.58678619322877,0.13020438484395,0.419437377702843,0,0,0,0.608175645870493,1.02710957164827,0.129920822977795,0.537080087002444,0.198681354781265,0.120195449519969,0.738447635872886,0.504832249740738,0.304827226619999,0.504130925684203,1.26695244961678,0.865906574762965,0,0.226730383615211,0,0.0897138566094757,0,0,0.563047426353546,0.549454872801795,0.214368379079066,0,18.0720589637461,21.1749608793301,16.0410743763031,13.748254587495,15.0718154349541,9.82012066606611,17.550585006027,14.8605997063993,18.5788387683524,12.9440077937955,1.03787347584177,1.99512436700516,5.29274177837816,6.32077464377565,4.19226325255965,6.06683577885047,10.0011027510727,9.27157757575024,9.94849549734627,13.1402550117175,11.4065684950608,11.6948331659367,10.7687733590365,9.60377286073039,9.47685237767619,8.57328644309533,7.64836551236046,8.87382414133043,11.9504911232959,10.5983222496766,9.60033906679163,7.27650805253284,9.77588378784016,10.3195955808953,12.0460006931623,9.05376304440939,7.3171189149109,11.0489278803894,8.69146328613515,9.53941861818155,9.96534152243063,6.59980031916275,13.0953933814301,11.6202630889474,7.71626443924566,9.74261253957989,8.88940112092552,4.29742108096597,11.4772999241306,8.38247392654159,3.2461496986859
|phase1_expression=16.0148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.40173160604279,0,0,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0.194429899074283,0.279972843250725,0,0,0,0,0,0,0,16.3876333296274,22.7466121086974,19.6487735086916,0,0,0,0,0,1.19840044207362,1.53687322128622,1.55534418462716,4.18518408828241,3.57552434297349,24.5659846587271,27.8294361599033,4.77714116938321,3.45043695665651,6.43453150627015,16.5173821499083,17.6208526557559,13.5173749265494,11.6059933202571,14.1805847583735,14.0646610050325,14.2383329490704,7.87867654044352,14.2102370432433,43.0157734791555,49.6877165988869,26.2823218613674,1.66597625333005,3.6274348851257,0,0,0,0,0,0,0.983110940922263,0,0,0,4.64783285263046,0,0,0,0,0,0,0.5709193985953,0,0,0.867426633830679,2.13125834818499,0.230615497256059,1.05505848386836,0.823120949949934,0,0,0,0,0.323533699894818,0,0,0,12.8823550685081,10.0534419270458,0,0,0,0,11.3840885947665,8.23501085073528,7.03664371832041,14.6012428961512,10.9957646652042,12.8828587626927,9.40999325792994,4.17541391786297,0,0.252722758433675,22.7277204357392,4.03373373184381,0.919608417733892,2.16074555766419,4.52114453507145,1.97305847538851,3.33095672740609,4.02917415606834,46.5666067330228,1.72454394346274,1.70195472151037,1.05570674498369,0.657587197282725,1.66828349535359,1.39300866608867,4.52720700097476,9.75267907410617,0,0,0,0.828503090142008,0.234526059981096,0.540186184383045,0.946978942340841,0.393528463494808,0.154267112887378,0.232533944750408,0,0.350296027101508,0.16455984991348,0,0.243206428637567,0,0,0,12.1968170167194,8.12946437796347,0,0.528901133327089,2.13288250535234,1.39342003116263,1.54640953586512,1.4117846723634,0.667134131534611,0.951128130562796,1.42358718463353,1.31759163779209,0.754005626400808,0.596869416123452,1.16978452271472,0.898819408654221,0,0.597423819763102,0.948339504765408,1.5994791765362,2.25415471346161,1.62921062276251,2.13347735884388,0.911765658574141,1.20149420536089,0,0.31399745568275,0,0,0.667380422864376,0.196558995113203,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0.369506380333209,1.32643988239339,0.488894929326078,0.169745085775188,0.234690248288502,0.167506257441816,0.714130922658041,0,0.315270288212382,0.44292937929755,0.956728611944923,0.163863314715738,0,0.144649058581512,0,0,0,0,15.2523060488402,9.96299336033727,0,0,18.6149849455591,24.2072021463916,16.1567548299599,10.7535959078648,13.1451217708613,15.0030561318081,19.02610297872,21.0424217696145,16.2067988958075,21.8498495166829,0.141940085208269,8.369083372361,8.47012188638596,0.164970122972535,0,7.28341908464944,3.32555912661226,3.20628635585027,1.18120757152309,3.68922177532713,0.775284879504663,1.45413491791002,0.356497378384721,0.316036757935816,0,0,5.44703369206061,1.62054984628179,1.55230420539305,2.35770738534752,1.41872186913819,5.35106452806212,11.5184314421485,9.13394847343798,0.23467170806371,0,0.220528398054962,1.81374878235628,0.161464426695906,0.301564624640779,0.119372344003136,0,0.291480836629851,10.198391610578,0,1.65109494370578,0.925972636848558,0.376736914009382,0,0.228778173206523,0,0,0,0,1.58167996790568,5.28630614529807,3.24016022465404,3.13632444021703,1.74690050996942,1.61837215661785,1.1571483801547,0.785267825952089,0.259229946583586,0,0,1.49516546043979,0.992750942742586,1.36115831840833,0.645799117388655,0.506868376472335,0.58678619322877,0.13020438484395,0.419437377702843,0,0,0,0.608175645870493,1.02710957164827,0.129920822977795,0.537080087002444,0.198681354781265,0.120195449519969,0.738447635872886,0.504832249740738,0.304827226619999,0.504130925684203,1.26695244961678,0.865906574762965,0,0.226730383615211,0,0.0897138566094757,0,0,0.563047426353546,0.549454872801795,0.214368379079066,0,18.0720589637461,21.1749608793301,16.0410743763031,13.748254587495,15.0718154349541,9.82012066606611,17.550585006027,14.8605997063993,18.5788387683524,12.9440077937955,1.03787347584177,1.99512436700516,5.29274177837816,6.32077464377565,4.19226325255965,6.06683577885047,10.0011027510727,9.27157757575024,9.94849549734627,13.1402550117175,11.4065684950608,11.6948331659367,10.7687733590365,9.60377286073039,9.47685237767619,8.57328644309533,7.64836551236046,8.87382414133043,11.9504911232959,10.5983222496766,9.60033906679163,7.27650805253284,9.77588378784016,10.3195955808953,12.0460006931623,9.05376304440939,7.3171189149109,11.0489278803894,8.69146328613515,9.53941861818155,9.96534152243063,6.59980031916275,13.0953933814301,11.6202630889474,7.71626443924566,9.74261253957989,8.88940112092552,4.29742108096597,11.4772999241306,8.38247392654159,3.2461496986859
|short_description=p1@Grik1
}}
}}

Latest revision as of 19:36, 25 September 2015

Short description:p1@Grik1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Grik1_5end
Coexpression cluster:MCL_coexpression_mm9:1702
Association with transcript: 31bp_to_NM_010348, NM_146072, uc007zur.2, uc007zus.2, uc007zuv.2, uc007zuw.2, uc007zux.2_5end
EntrezGene:Grik1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Grik1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G716.01
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.40
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C316.39
Mouse Granule cells, donor2.CNhs12357.11731-123E322.75
Mouse Granule cells, donor3.CNhs12108.11636-122C719.65
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.20
Mouse Microglia, donor2.CNhs12634.11736-123E81.54
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.56
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F54.19
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D93.58
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F124.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D527.83
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D24.78
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.45
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D66.43
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D316.52
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F317.62
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D713.52
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D411.61
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F414.18
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D814.06
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E414.24
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E57.88
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I614.21
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D643.02
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F649.69
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E126.28
Mouse Schwann, donor1.CNhs12507.11728-123D91.67
Mouse Schwann, donor2.CNhs12573.11746-123F93.63
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.98
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G64.65
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.57
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.87
adrenal gland, embryo E16.CNhs11004.1254-43D62.13
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F51.06
adrenal gland, neonate N00.CNhs11191.1311-23C10.82
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B212.88
cerebellum, neonate N30.CNhs11135.1395-42I210.05
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A411.38
corpus striatum, adult.CNhs10487.19-21D88.24
corpus striatum, neonate N00.CNhs11226.630-43F17.04
cortex, adult.CNhs10473.12-14D514.60
cortex, neonate N30.CNhs11107.1392-42F211.00
diencephalon, adult.CNhs10482.20-12F212.88
diencephalon, neonate N30.CNhs11201.1388-42B29.41
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B14.18
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G422.73
eyeball, embryo E12.CNhs11016.345-16C64.03
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C92.16
eyeball, embryo E17.CNhs11023.1261-18D44.52
eyeball, neonate N00.CNhs11207.633-15C61.97
eyeball, neonate N01.CNhs11140.1532-43E73.33
eyeball, neonate N02.CNhs11205.1551-44G84.03
eyeball, neonate N16.CNhs11188.777-19A246.57
forelimb, embryo E11.CNhs10596.335-25E21.72
forelimb, embryo E12.CNhs10600.359-14H21.70
forelimb, embryo E13.CNhs10589.384-1E21.06
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E71.67
forelimb, embryo E17.CNhs10598.1517-43C41.39
forelimb, embryo E18.CNhs11008.1520-43B54.53
gonad, embryo E13.CNhs11044.1564-45I69.75
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.83
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D40.95
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.24
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E812.20
hippocampus, neonate N00.CNhs11228.627-43G18.13
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I52.13
intestine, embryo E13.CNhs11010.381-16D51.39
intestine, embryo E15.CNhs10602.976-16D81.55
intestine, embryo E16.CNhs10585.463-22H41.41
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.95
intestine, neonate N00.CNhs11126.644-26D11.42
intestine, neonate N01.CNhs11192.1322-23E91.32
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A51.17
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I90.95
kidney, embryo E15.CNhs10997.434-16F81.60
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I21.63
kidney, embryo E18.CNhs11001.1288-20C72.13
kidney, neonate N00.CNhs11214.646-21G70.91
kidney, neonate N10.CNhs11206.758-6D51.20
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.67
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G21.33
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.71
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.96
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C215.25
medulla oblongata, neonate N30.CNhs11200.1396-42A39.96
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E118.61
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E224.21
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E316.16
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D710.75
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D813.15
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D915.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D419.03
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D521.04
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D616.21
olfactory brain, adult.CNhs10489.18-22I921.85
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H78.37
ovary, neonate N00.CNhs11217.1299-22I48.47
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F47.28
pancreas, embryo E15.CNhs11042.1556-45F23.33
pancreas, embryo E16.CNhs11003.460-26E53.21
pancreas, embryo E17.CNhs10599.1558-45G31.18
pancreas, embryo E18.CNhs10580.1535-43I73.69
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D71.45
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G85.45
pituitary gland, embryo E12.CNhs11018.346-16E61.62
pituitary gland, embryo E13.CNhs11009.370-44C71.55
pituitary gland, embryo E14.CNhs11037.398-44A52.36
pituitary gland, embryo E15.CNhs10592.427-16B91.42
pituitary gland, embryo E16.CNhs11036.449-43F65.35
pituitary gland, embryo E17.CNhs11039.1265-44F511.52
pituitary gland, neonate N00.CNhs11190.1308-22E99.13
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C31.81
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.30
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C910.20
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C11.65
spleen, embryo E18.CNhs11011.1271-21F20.93
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.58
stomach, embryo E15.CNhs10603.1252-16G85.29
stomach, embryo E16.CNhs11022.459-17D43.24
stomach, embryo E17.CNhs11006.1035-18D53.14
stomach, embryo E18.CNhs10999.1286-20C61.75
stomach, neonate N03.CNhs11193.1340-24B81.62
stomach, neonate N07.CNhs11210.718-18A91.16
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.50
testis, embryo E15.CNhs11034.443-27C50.99
testis, embryo E16.CNhs11033.470-26G51.36
testis, embryo E17.CNhs11029.486-18I50.65
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B70.59
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.42
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I21.03
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.54
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.74
thymus, neonate N06.CNhs11197.681-26C40.50
thymus, neonate N07.CNhs11211.713-19D30.30
thymus, neonate N10.CNhs11194.748-24E40.50
thymus, neonate N20.CNhs11186.820-7A21.27
thymus, neonate N25.CNhs11125.1362-25G70.87
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.56
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A118.07
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A221.17
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A316.04
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D713.75
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A415.07
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A59.82
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A617.55
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A714.86
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A818.58
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A912.94
whole body, embryo E11.CNhs11014.324-5I81.04
whole body, embryo E12.CNhs10587.857-27C92.00
whole body, embryo E13.CNhs10512.372-23H25.29
whole body, embryo E14.5.CNhs10578.420-27D26.32
whole body, embryo E14.CNhs10519.395-14B14.19
whole body, embryo E16.CNhs10514.453-14F26.07
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G510.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G59.27
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G59.95
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G513.14
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G511.41
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G511.69
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G510.77
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G59.60
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G59.48
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G58.57
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G57.65
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G58.87
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G511.95
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G510.60
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G59.60
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G57.28
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G59.78
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G510.32
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G512.05
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G59.05
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G57.32
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G511.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G58.69
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G59.54
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G59.97
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G56.60
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G513.10
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G511.62
whole body, embryo E17.5.CNhs10513.490-9F97.72
whole body, embryo E17.CNhs10517.475-3I59.74
whole body, embryo E18.CNhs10516.493-3B38.89
whole body, neonate N00.CNhs10525.657-19C24.30
whole body, neonate N01.CNhs10576.659-23C611.48
whole body, neonate N06.CNhs10515.692-21D18.38
whole body, neonate N10.CNhs10518.761-6B43.25





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
nervous system8.65e-3275
central nervous system1.80e-3173
ectoderm-derived structure3.65e-2895
ectoderm3.65e-2895
presumptive ectoderm3.65e-2895
neurectoderm2.20e-2464
neural plate2.20e-2464
presumptive neural plate2.20e-2464
regional part of nervous system1.13e-2154
ecto-epithelium2.79e-2173
neural tube4.88e-2052
neural rod4.88e-2052
future spinal cord4.88e-2052
neural keel4.88e-2052
pre-chordal neural plate1.16e-1649
brain2.80e-1647
future brain2.80e-1647
gray matter6.53e-1634
regional part of brain1.56e-1546
anterior neural tube7.71e-1540
regional part of forebrain2.50e-1439
forebrain2.50e-1439
future forebrain2.50e-1439
structure with developmental contribution from neural crest2.19e-1292
brain grey matter6.40e-1229
regional part of telencephalon6.40e-1229
telencephalon6.40e-1229
cerebral cortex3.62e-0821
cerebral hemisphere3.62e-0821
pallium3.62e-0821
occipital lobe6.49e-0810
visual cortex6.49e-0810
neocortex6.49e-0810
autonomic nervous system1.40e-079
peripheral nervous system1.78e-0711
regional part of cerebral cortex2.85e-0717
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