FFCP PHASE1:Mm9::chr10:128328919..128328934,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=14561 | |EntrezGene=14561 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1233 | |||
|TSSclassifier=NA | |||
|UniProt=Q9Z1W4 | |UniProt=Q9Z1W4 | ||
|association_with_transcript=-145bp_to_ENSMUST00000026408,NM_010272,uc007hot.1_5end | |association_with_transcript=-145bp_to_ENSMUST00000026408,NM_010272,uc007hot.1_5end | ||
|cluster_id=chr10:128328919..128328934,- | |||
|description=CAGE_peak_2_at_Gdf11_5end | |description=CAGE_peak_2_at_Gdf11_5end | ||
|id=chr10:128328919..128328934,- | |id=chr10:128328919..128328934,- | ||
|ontology_enrichment_celltype=CL:0000221!2.56e-19!44;CL:0000133!2.56e-19!44;CL:0002319!1.14e-18!43;CL:0000055!6.81e-18!50;CL:0000393!7.21e-16!39;CL:0000211!7.21e-16!39;CL:0000540!1.12e-15!33;CL:0000047!1.12e-15!33;CL:0000031!1.12e-15!33;CL:0000404!1.12e-15!33;CL:0000117!1.15e-10!23;CL:0000337!1.15e-10!23;CL:0002321!1.11e-08!70;CL:0000220!1.11e-08!70 | |ontology_enrichment_celltype=CL:0000221!2.56e-19!44;CL:0000133!2.56e-19!44;CL:0002319!1.14e-18!43;CL:0000055!6.81e-18!50;CL:0000393!7.21e-16!39;CL:0000211!7.21e-16!39;CL:0000540!1.12e-15!33;CL:0000047!1.12e-15!33;CL:0000031!1.12e-15!33;CL:0000404!1.12e-15!33;CL:0000117!1.15e-10!23;CL:0000337!1.15e-10!23;CL:0002321!1.11e-08!70;CL:0000220!1.11e-08!70 | ||
|ontology_enrichment_celltype_v019_2=CL:0000221,1.58e-22,44;CL:0000133,1.58e-22,44;CL:0002319,8.92e-22,43;CL:0000540,7.03e-18,33;CL:0000047,7.03e-18,33;CL:0000031,7.03e-18,33;CL:0000404,7.03e-18,33;CL:0000393,7.50e-18,39;CL:0000211,7.50e-18,39;CL:0002321,3.11e-13,70;CL:0000117,4.39e-12,23;CL:0000337,4.39e-12,23;CL:0000723,5.36e-07,91;CL:0000048,5.36e-07,91 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.80e-27!75;UBERON:0001016!3.80e-27!75;UBERON:0001017!3.66e-26!73;UBERON:0005743!3.66e-26!73;UBERON:0004121!3.61e-21!102;UBERON:0000924!3.61e-21!102;UBERON:0006601!3.61e-21!102;UBERON:0000033!1.56e-18!63;UBERON:0002346!8.60e-18!71;UBERON:0003075!8.60e-18!71;UBERON:0007284!8.60e-18!71;UBERON:0000153!2.86e-17!94;UBERON:0001049!4.97e-17!52;UBERON:0005068!4.97e-17!52;UBERON:0006241!4.97e-17!52;UBERON:0007135!4.97e-17!52;UBERON:0007811!8.10e-17!86;UBERON:0000955!1.96e-16!50;UBERON:0006238!1.96e-16!50;UBERON:0003056!2.88e-16!49;UBERON:0002616!8.64e-16!49;UBERON:0003080!1.20e-13!40;UBERON:0002780!3.00e-13!39;UBERON:0001890!3.00e-13!39;UBERON:0006240!3.00e-13!39;UBERON:0002020!9.45e-11!34;UBERON:0002791!4.48e-09!29;UBERON:0003528!4.48e-09!29;UBERON:0001893!4.48e-09!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,5.54e-30,75;UBERON:0001017,7.46e-29,73;UBERON:0004121,6.25e-27,95;UBERON:0000924,6.25e-27,95;UBERON:0006601,6.25e-27,95;UBERON:0002346,1.14e-22,64;UBERON:0003075,1.14e-22,64;UBERON:0007284,1.14e-22,64;UBERON:0010371,5.59e-19,73;UBERON:0000073,9.62e-19,54;UBERON:0001049,4.98e-18,52;UBERON:0005068,4.98e-18,52;UBERON:0006241,4.98e-18,52;UBERON:0007135,4.98e-18,52;UBERON:0003056,2.51e-17,49;UBERON:0000955,4.83e-16,47;UBERON:0006238,4.83e-16,47;UBERON:0002616,2.49e-15,46;UBERON:0010314,8.31e-15,92;UBERON:0003080,2.28e-14,40;UBERON:0002780,6.46e-14,39;UBERON:0001890,6.46e-14,39;UBERON:0006240,6.46e-14,39;UBERON:0002020,4.26e-11,34;UBERON:0003528,3.42e-09,29;UBERON:0002791,3.42e-09,29;UBERON:0001893,3.42e-09,29;UBERON:0000010,2.31e-07,11 | |||
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| ||
|short_description=p2@Gdf11 | |short_description=p2@Gdf11 | ||
}} | }} |
Latest revision as of 19:28, 25 September 2015
Short description: | p2@Gdf11 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Gdf11_5end |
Coexpression cluster: | MCL_coexpression_mm9:1233 |
Association with transcript: | -145bp_to_ENSMUST00000026408, NM_010272, uc007hot.1_5end |
EntrezGene: | Gdf11 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 1.58e-22 | 44 |
neurectodermal cell | 1.58e-22 | 44 |
neural cell | 8.92e-22 | 43 |
neuron | 7.03e-18 | 33 |
neuronal stem cell | 7.03e-18 | 33 |
neuroblast | 7.03e-18 | 33 |
electrically signaling cell | 7.03e-18 | 33 |
electrically responsive cell | 7.50e-18 | 39 |
electrically active cell | 7.50e-18 | 39 |
embryonic cell | 3.11e-13 | 70 |
CNS neuron (sensu Vertebrata) | 4.39e-12 | 23 |
neuroblast (sensu Vertebrata) | 4.39e-12 | 23 |
somatic stem cell | 5.36e-07 | 91 |
multi fate stem cell | 5.36e-07 | 91 |
Ontology term | p-value | n |
---|---|---|
nervous system | 5.54e-30 | 75 |
central nervous system | 7.46e-29 | 73 |
ectoderm-derived structure | 6.25e-27 | 95 |
ectoderm | 6.25e-27 | 95 |
presumptive ectoderm | 6.25e-27 | 95 |
neurectoderm | 1.14e-22 | 64 |
neural plate | 1.14e-22 | 64 |
presumptive neural plate | 1.14e-22 | 64 |
ecto-epithelium | 5.59e-19 | 73 |
regional part of nervous system | 9.62e-19 | 54 |
neural tube | 4.98e-18 | 52 |
neural rod | 4.98e-18 | 52 |
future spinal cord | 4.98e-18 | 52 |
neural keel | 4.98e-18 | 52 |
pre-chordal neural plate | 2.51e-17 | 49 |
brain | 4.83e-16 | 47 |
future brain | 4.83e-16 | 47 |
regional part of brain | 2.49e-15 | 46 |
structure with developmental contribution from neural crest | 8.31e-15 | 92 |
anterior neural tube | 2.28e-14 | 40 |
regional part of forebrain | 6.46e-14 | 39 |
forebrain | 6.46e-14 | 39 |
future forebrain | 6.46e-14 | 39 |
gray matter | 4.26e-11 | 34 |
brain grey matter | 3.42e-09 | 29 |
regional part of telencephalon | 3.42e-09 | 29 |
telencephalon | 3.42e-09 | 29 |
peripheral nervous system | 2.31e-07 | 11 |