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FFCP PHASE1:Mm9::chr8:75170578..75170624,+: Difference between revisions

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(Created page with "{{FFCP |id=chr8:75170578..75170624,+ |short_description=p1@Nwd1 |description=CAGE_peak_1_at_Nwd1_5end |association_with_transcript=0bp_to_ENSMUST00000109959,ENSMUST0000016...")
 
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{{FFCP
{{FFCP
|id=chr8:75170578..75170624,+
|DHSsupport=NA
|short_description=p1@Nwd1
|DPIdataset=NA
|description=CAGE_peak_1_at_Nwd1_5end
|association_with_transcript=0bp_to_ENSMUST00000109959,ENSMUST00000161386,ENSMUST00000161557,NM_176940,uc009mgk.2,uc009mgl.2,uc009mgm.2_5end
|EntrezGene=319555
|EntrezGene=319555
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=A6H603,E0CYZ6,E0CY71,E0CX99
|UniProt=A6H603,E0CYZ6,E0CY71,E0CX99
|association_with_transcript=0bp_to_ENSMUST00000109959,ENSMUST00000161386,ENSMUST00000161557,NM_176940,uc009mgk.2,uc009mgl.2,uc009mgm.2_5end
|cluster_id=chr8:75170578..75170624,+
|description=CAGE_peak_1_at_Nwd1_5end
|id=chr8:75170578..75170624,+
|ontology_enrichment_celltype=CL:0000221!1.20e-16!44;CL:0000133!1.20e-16!44;CL:0002319!4.03e-16!43;CL:0000540!1.09e-12!33;CL:0000047!1.09e-12!33;CL:0000031!1.09e-12!33;CL:0000404!1.09e-12!33;CL:0000055!3.20e-12!50;CL:0000117!5.28e-10!23;CL:0000337!5.28e-10!23;CL:0000393!1.63e-09!39;CL:0000211!1.63e-09!39
|ontology_enrichment_celltype_v019_2=CL:0000221,3.02e-19,44;CL:0000133,3.02e-19,44;CL:0002319,1.51e-18,43;CL:0000540,1.85e-14,33;CL:0000047,1.85e-14,33;CL:0000031,1.85e-14,33;CL:0000404,1.85e-14,33;CL:0000117,1.26e-12,23;CL:0000337,1.26e-12,23;CL:0000393,7.59e-11,39;CL:0000211,7.59e-11,39;CL:0002321,8.45e-08,70
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!1.62e-36!75;UBERON:0001016!1.62e-36!75;UBERON:0001017!7.26e-36!73;UBERON:0005743!7.26e-36!73;UBERON:0004121!3.64e-26!102;UBERON:0000924!3.64e-26!102;UBERON:0006601!3.64e-26!102;UBERON:0001049!8.41e-26!52;UBERON:0005068!8.41e-26!52;UBERON:0006241!8.41e-26!52;UBERON:0007135!8.41e-26!52;UBERON:0000955!6.47e-25!50;UBERON:0006238!6.47e-25!50;UBERON:0002616!4.69e-24!49;UBERON:0000033!1.41e-22!63;UBERON:0007811!2.02e-21!86;UBERON:0002346!2.97e-20!71;UBERON:0003075!2.97e-20!71;UBERON:0007284!2.97e-20!71;UBERON:0003080!5.72e-19!40;UBERON:0002780!3.24e-18!39;UBERON:0001890!3.24e-18!39;UBERON:0006240!3.24e-18!39;UBERON:0002020!1.04e-17!34;UBERON:0000153!1.86e-17!94;UBERON:0003056!2.01e-17!49;UBERON:0002791!1.20e-14!29;UBERON:0003528!1.20e-14!29;UBERON:0001893!1.20e-14!29;UBERON:0000956!2.94e-11!21;UBERON:0001869!2.94e-11!21;UBERON:0000203!2.94e-11!21;UBERON:0002619!2.09e-09!17;UBERON:0002021!9.93e-08!10;UBERON:0000411!9.93e-08!10;UBERON:0001950!9.93e-08!10;UBERON:0003076!2.25e-07!12;UBERON:0003057!2.25e-07!12
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.14e-43,73;UBERON:0001016,1.84e-43,75;UBERON:0004121,2.83e-35,95;UBERON:0000924,2.83e-35,95;UBERON:0006601,2.83e-35,95;UBERON:0000073,2.15e-34,54;UBERON:0001049,3.22e-32,52;UBERON:0005068,3.22e-32,52;UBERON:0006241,3.22e-32,52;UBERON:0007135,3.22e-32,52;UBERON:0002346,9.09e-30,64;UBERON:0003075,9.09e-30,64;UBERON:0007284,9.09e-30,64;UBERON:0000955,5.78e-28,47;UBERON:0006238,5.78e-28,47;UBERON:0002616,7.88e-27,46;UBERON:0010371,2.91e-26,73;UBERON:0002020,3.41e-23,34;UBERON:0003080,1.42e-22,40;UBERON:0002780,1.45e-21,39;UBERON:0001890,1.45e-21,39;UBERON:0006240,1.45e-21,39;UBERON:0003056,2.51e-20,49;UBERON:0003528,5.60e-19,29;UBERON:0002791,5.60e-19,29;UBERON:0001893,5.60e-19,29;UBERON:0010314,5.46e-17,92;UBERON:0000956,2.51e-15,21;UBERON:0001869,2.51e-15,21;UBERON:0000203,2.51e-15,21;UBERON:0002619,9.12e-13,17;UBERON:0011216,2.27e-10,194;UBERON:0002021,4.31e-10,10;UBERON:0000411,4.31e-10,10;UBERON:0001950,4.31e-10,10;UBERON:0003076,5.67e-10,12;UBERON:0003057,5.67e-10,12;UBERON:0000025,7.68e-08,114;UBERON:0004111,1.92e-07,122
|phase1_expression=2.08193501236232,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21112554392781,1.19149141441062,2.08959831311148,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0,0,9.81113203712009,5.71184075109627,6.9994763666742,4.33957907038624,2.87505128729943,0,0,0,0,0,0,1.21389876515759,2.11596391708813,1.90149421051854,0,0,0,0,0,3.89480143673926,5.76327457982332,3.00699875694585,4.3201900266141,1.89292465216244,9.14083150092171,7.50953039235486,1.83736198822431,2.1086003624012,0,8.8092704799511,9.3211756802187,10.5988507946808,0.659431438650969,1.18933936683133,1.56274011167028,7.2587579740359,6.75315132038016,9.93188610549266,8.83885756421003,8.39992916714707,3.16879057903011,0.757261933331841,2.49386148352392,0,0,0,0.539703191637817,0,0,0.983110940922263,0,0,0,4.3661460130771,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0,0.173485326766136,0,0,0,0,0,0,0.289198713839823,0,0,0.220841518460394,0,0,12.0040126774734,11.9384622883669,0,2.87556298814209,1.19980546198682,2.66847476853436,10.6351353977424,12.8100168789215,2.38743269014442,9.90798625095976,9.71718737855256,11.4283424507758,10.058958310201,0,0.124406970610093,0.252722758433675,1.05220927943237,0,0,0,0.150704817835715,0.748401490664606,2.0498195245576,1.59292931751539,2.32833033665114,0,0,0,0,0,0,0,0,1.40442637462647,1.80143534980301,1.42081749697796,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,14.0894265537965,3.49875682089567,0,0,0,0,0.128867461322093,0,0.22237804384487,0.380451252225118,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0.162135226775035,0,0,0,0,0,0,0,2.95605104266567,0,0,0,0.469380496577004,0.335012514883631,0.238043640886014,0.195133647857799,0.788175720530955,0,0.637819074629948,1.14704320301017,0.690739927463582,0.289298117163023,0,0,0,0.275936746304732,10.2752377592187,10.7834751664827,0,0,0.94652465824877,1.56175497718655,1.29254038639679,2.62865677747807,2.45078541490634,2.54768877709949,1.61924280669958,0.876767573733936,1.18586333383957,17.3513510867776,2.41298144854057,0.178065603667255,0.162886959353576,6.43383479592888,0,0,0,0,0,0,0,0.363533729477506,0.356497378384721,0,0,0,6.46835250932197,0.18006109403131,0.388076051348264,0.428674070063185,3.01478397191865,3.74574516964348,5.59466670047211,2.43571959291679,0,0,0,0,0,0.0603129249281559,0.119372344003136,0.164140899745061,0,8.15871328846243,0.170870880797853,0,0,0.376736914009382,0.136694227721025,0,7.9889862097112,9.23679585336143,8.56839837587428,0,0,0.203319467126849,0.108005340821801,0,0,0.269728692769641,0.247960367176008,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,6.32022241256356,0.202725215290164,0.308132871494482,0.909445760844565,1.07416017400489,0.993406773906324,1.9231271923195,1.9199638532695,3.53382574818517,3.50551310612999,2.82313318383153,4.0932309910696,4.2333210321745,4.79195298944433,0,0,0,0,0,0.187682475451182,0.183151624267265,0,0.501572104035363,5.0827665835536,6.44455331110048,10.8850147553485,8.42080593484069,6.16574267793578,12.0863023582352,8.77529250301348,8.10578165803597,12.2348450425735,8.80192529978094,0,0.399024873401031,0.170733605754134,0.243106717068294,0.419226325255965,0.551530525350042,0,1.44224540067226,1.60459604795908,1.26348605881899,1.2673964994512,0,0.936415074698824,0.89635213366817,1.09127391015665,0.476293691283074,0.579421629724277,1.35036454324594,2.06042950401653,0.588795680537589,0.685738504770831,1.06485483695602,0.476872379894642,0.581385666529314,1.03520318456864,0.846146078916765,1.64635175585495,0.263069711437843,0.814824683075171,0,0.949080144993393,0.689531376628944,0,0.929621047115796,0.385813221962283,1.49886346762768,0.701794825336225,0.644613162144895,0,0,0.463735671240843
|phase1_expression=2.08193501236232,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21112554392781,1.19149141441062,2.08959831311148,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0,0,9.81113203712009,5.71184075109627,6.9994763666742,4.33957907038624,2.87505128729943,0,0,0,0,0,0,1.21389876515759,2.11596391708813,1.90149421051854,0,0,0,0,0,3.89480143673926,5.76327457982332,3.00699875694585,4.3201900266141,1.89292465216244,9.14083150092171,7.50953039235486,1.83736198822431,2.1086003624012,0,8.8092704799511,9.3211756802187,10.5988507946808,0.659431438650969,1.18933936683133,1.56274011167028,7.2587579740359,6.75315132038016,9.93188610549266,8.83885756421003,8.39992916714707,3.16879057903011,0.757261933331841,2.49386148352392,0,0,0,0.539703191637817,0,0,0.983110940922263,0,0,0,4.3661460130771,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0,0.173485326766136,0,0,0,0,0,0,0.289198713839823,0,0,0.220841518460394,0,0,12.0040126774734,11.9384622883669,0,2.87556298814209,1.19980546198682,2.66847476853436,10.6351353977424,12.8100168789215,2.38743269014442,9.90798625095976,9.71718737855256,11.4283424507758,10.058958310201,0,0.124406970610093,0.252722758433675,1.05220927943237,0,0,0,0.150704817835715,0.748401490664606,2.0498195245576,1.59292931751539,2.32833033665114,0,0,0,0,0,0,0,0,1.40442637462647,1.80143534980301,1.42081749697796,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,14.0894265537965,3.49875682089567,0,0,0,0,0.128867461322093,0,0.22237804384487,0.380451252225118,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0.162135226775035,0,0,0,0,0,0,0,2.95605104266567,0,0,0,0.469380496577004,0.335012514883631,0.238043640886014,0.195133647857799,0.788175720530955,0,0.637819074629948,1.14704320301017,0.690739927463582,0.289298117163023,0,0,0,0.275936746304732,10.2752377592187,10.7834751664827,0,0,0.94652465824877,1.56175497718655,1.29254038639679,2.62865677747807,2.45078541490634,2.54768877709949,1.61924280669958,0.876767573733936,1.18586333383957,17.3513510867776,2.41298144854057,0.178065603667255,0.162886959353576,6.43383479592888,0,0,0,0,0,0,0,0.363533729477506,0.356497378384721,0,0,0,6.46835250932197,0.18006109403131,0.388076051348264,0.428674070063185,3.01478397191865,3.74574516964348,5.59466670047211,2.43571959291679,0,0,0,0,0,0.0603129249281559,0.119372344003136,0.164140899745061,0,8.15871328846243,0.170870880797853,0,0,0.376736914009382,0.136694227721025,0,7.9889862097112,9.23679585336143,8.56839837587428,0,0,0.203319467126849,0.108005340821801,0,0,0.269728692769641,0.247960367176008,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,6.32022241256356,0.202725215290164,0.308132871494482,0.909445760844565,1.07416017400489,0.993406773906324,1.9231271923195,1.9199638532695,3.53382574818517,3.50551310612999,2.82313318383153,4.0932309910696,4.2333210321745,4.79195298944433,0,0,0,0,0,0.187682475451182,0.183151624267265,0,0.501572104035363,5.0827665835536,6.44455331110048,10.8850147553485,8.42080593484069,6.16574267793578,12.0863023582352,8.77529250301348,8.10578165803597,12.2348450425735,8.80192529978094,0,0.399024873401031,0.170733605754134,0.243106717068294,0.419226325255965,0.551530525350042,0,1.44224540067226,1.60459604795908,1.26348605881899,1.2673964994512,0,0.936415074698824,0.89635213366817,1.09127391015665,0.476293691283074,0.579421629724277,1.35036454324594,2.06042950401653,0.588795680537589,0.685738504770831,1.06485483695602,0.476872379894642,0.581385666529314,1.03520318456864,0.846146078916765,1.64635175585495,0.263069711437843,0.814824683075171,0,0.949080144993393,0.689531376628944,0,0.929621047115796,0.385813221962283,1.49886346762768,0.701794825336225,0.644613162144895,0,0,0.463735671240843
|short_description=p1@Nwd1
}}
}}

Latest revision as of 19:07, 25 September 2015

Short description:p1@Nwd1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Nwd1_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000109959, ENSMUST00000161386, ENSMUST00000161557, NM_176940, uc009mgk.2, uc009mgl.2, uc009mgm.2_5end
EntrezGene:Nwd1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Nwd1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.08
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.21
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.19
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I92.09
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C29.81
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B85.71
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C37.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C44.34
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.21
Mouse Granule cells, donor2.CNhs12357.11731-123E32.12
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C83.89
Mouse Microglia, donor2.CNhs12634.11736-123E85.76
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D53.01
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F54.32
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.89
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F19.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D57.51
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.84
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.11
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D38.81
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F39.32
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D710.60
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.66
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.19
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E47.26
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E56.75
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I69.93
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D68.84
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F68.40
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13.17
Mouse Schwann, donor1.CNhs12507.11728-123D90.76
Mouse Schwann, donor2.CNhs12573.11746-123F92.49
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.98
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G64.37
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B212.00
cerebellum, neonate N30.CNhs11135.1395-42I211.94
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C72.88
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D42.67
corpora quadrigemina, adult.CNhs10501.16-22A410.64
corpus striatum, adult.CNhs10487.19-21D812.81
corpus striatum, neonate N00.CNhs11226.630-43F12.39
cortex, adult.CNhs10473.12-14D59.91
cortex, neonate N30.CNhs11107.1392-42F29.72
diencephalon, adult.CNhs10482.20-12F211.43
diencephalon, neonate N30.CNhs11201.1388-42B210.06
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G41.05
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.75
eyeball, neonate N01.CNhs11140.1532-43E72.05
eyeball, neonate N02.CNhs11205.1551-44G81.59
eyeball, neonate N16.CNhs11188.777-19A22.33
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C81.40
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.80
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.42
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E814.09
hippocampus, neonate N00.CNhs11228.627-43G13.50
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B12.96
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.47
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.79
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.64
lung, neonate N20.CNhs11109.822-18A41.15
lung, neonate N25.CNhs11119.1359-25C70.69
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C210.28
medulla oblongata, neonate N30.CNhs11200.1396-42A310.78
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.29
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.63
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.55
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.62
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I917.35
ovary, adult.CNhs10507.91-2I72.41
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G66.43
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G86.47
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B93.01
pituitary gland, embryo E16.CNhs11036.449-43F63.75
pituitary gland, embryo E17.CNhs11039.1265-44F55.59
pituitary gland, neonate N00.CNhs11190.1308-22E92.44
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C98.16
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C67.99
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C99.24
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D38.57
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.25
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B56.32
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.91
thymus, embryo E17.CNhs10581.478-18C11.07
thymus, embryo E18.CNhs10595.1273-19G40.99
thymus, neonate N02.CNhs11181.1541-43F81.92
thymus, neonate N03.CNhs11137.2104-43C71.92
thymus, neonate N06.CNhs11197.681-26C43.53
thymus, neonate N07.CNhs11211.713-19D33.51
thymus, neonate N10.CNhs11194.748-24E42.82
thymus, neonate N20.CNhs11186.820-7A24.09
thymus, neonate N25.CNhs11125.1362-25G74.23
thymus, neonate N30.CNhs11132.1393-42G24.79
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A15.08
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A26.44
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A310.89
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D78.42
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A46.17
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A512.09
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A68.78
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A78.11
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A812.23
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A98.80
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.90
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.06
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.04
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.85
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.93
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I51.50
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
ectodermal cell3.02e-1944
neurectodermal cell3.02e-1944
neural cell1.51e-1843
neuron1.85e-1433
neuronal stem cell1.85e-1433
neuroblast1.85e-1433
electrically signaling cell1.85e-1433
CNS neuron (sensu Vertebrata)1.26e-1223
neuroblast (sensu Vertebrata)1.26e-1223
electrically responsive cell7.59e-1139
electrically active cell7.59e-1139
embryonic cell8.45e-0870

Uber anatomy
Ontology termp-valuen
central nervous system1.14e-4373
nervous system1.84e-4375
ectoderm-derived structure2.83e-3595
ectoderm2.83e-3595
presumptive ectoderm2.83e-3595
regional part of nervous system2.15e-3454
neural tube3.22e-3252
neural rod3.22e-3252
future spinal cord3.22e-3252
neural keel3.22e-3252
neurectoderm9.09e-3064
neural plate9.09e-3064
presumptive neural plate9.09e-3064
brain5.78e-2847
future brain5.78e-2847
regional part of brain7.88e-2746
ecto-epithelium2.91e-2673
gray matter3.41e-2334
anterior neural tube1.42e-2240
regional part of forebrain1.45e-2139
forebrain1.45e-2139
future forebrain1.45e-2139
pre-chordal neural plate2.51e-2049
brain grey matter5.60e-1929
regional part of telencephalon5.60e-1929
telencephalon5.60e-1929
structure with developmental contribution from neural crest5.46e-1792
cerebral cortex2.51e-1521
cerebral hemisphere2.51e-1521
pallium2.51e-1521
regional part of cerebral cortex9.12e-1317
organ system subdivision2.27e-10194
occipital lobe4.31e-1010
visual cortex4.31e-1010
neocortex4.31e-1010
posterior neural tube5.67e-1012
chordal neural plate5.67e-1012
tube7.68e-08114
anatomical conduit1.92e-07122
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