FFCP PHASE1:Mm9::chr8:75095968..75096013,+: Difference between revisions
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{{FFCP|EntrezGene=74166|HGNC=|MCL_coexpression_id=311|UniProt=Q3TMP8|association_with_transcript=0bp_to_ENSMUST00000034244,NM_144534,uc009mgi.2_5end|description=CAGE_peak_2_at_Tmem38a_5end|id=chr8:75095968..75096013,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.99e-12!75;UBERON:0001016!1.99e-12!75;UBERON:0004121!2.41e-12!102;UBERON:0000924!2.41e-12!102;UBERON:0006601!2.41e-12!102;UBERON:0001017!2.60e-12!73;UBERON:0005743!2.60e-12!73;UBERON:0000033!7.36e-12!63;UBERON:0000955!4.89e-11!50;UBERON:0006238!4.89e-11!50;UBERON:0002346!1.34e-10!71;UBERON:0003075!1.34e-10!71;UBERON:0007284!1.34e-10!71;UBERON:0002616!1.37e-10!49;UBERON:0001049!1.67e-10!52;UBERON:0005068!1.67e-10!52;UBERON:0006241!1.67e-10!52;UBERON:0007135!1.67e-10!52;UBERON:0003056!1.07e-08!49;UBERON:0003080!6.43e-08!40;UBERON:0007100!1.29e-07!18;UBERON:0000948!1.29e-07!18;UBERON:0005498!1.29e-07!18;UBERON:0004140!1.29e-07!18;UBERON:0009881!1.29e-07!18;UBERON:0004141!1.29e-07!18;UBERON:0003084!1.29e-07!18;UBERON:0007005!1.29e-07!18;UBERON:0004139!1.29e-07!18;UBERON:0004291!1.29e-07!18;UBERON:0002780!1.64e-07!39;UBERON:0001890!1.64e-07!39;UBERON:0006240!1.64e-07!39;UBERON:0002021!2.83e-07!10;UBERON:0000411!2.83e-07!10;UBERON:0001950!2.83e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0010314,6.87e-18,92;UBERON:0004121,9.51e-13,95;UBERON:0000924,9.51e-13,95;UBERON:0006601,9.51e-13,95;UBERON:0001016,1.65e-12,75;UBERON:0001017,2.16e-12,73;UBERON:0000073,1.49e-11,54;UBERON:0002346,2.50e-11,64;UBERON:0003075,2.50e-11,64;UBERON:0007284,2.50e-11,64;UBERON:0001049,1.49e-10,52;UBERON:0005068,1.49e-10,52;UBERON:0006241,1.49e-10,52;UBERON:0007135,1.49e-10,52;UBERON:0010371,2.93e-10,73;UBERON:0000955,8.26e-10,47;UBERON:0006238,8.26e-10,47;UBERON:0002616,2.26e-09,46;UBERON:0003056,9.99e-09,49;UBERON:0003080,6.22e-08,40;UBERON:0007100,1.05e-07,18;UBERON:0000948,1.05e-07,18;UBERON:0005498,1.05e-07,18;UBERON:0004140,1.05e-07,18;UBERON:0009881,1.05e-07,18;UBERON:0004141,1.05e-07,18;UBERON:0003084,1.05e-07,18;UBERON:0007005,1.05e-07,18;UBERON:0004139,1.05e-07,18;UBERON:0004291,1.05e-07,18;UBERON:0002780,1.60e-07,39;UBERON:0001890,1.60e-07,39;UBERON:0006240,1.60e-07,39;UBERON:0002021,2.31e-07,10;UBERON:0000411,2.31e-07,10;UBERON:0001950,2.31e-07,10|phase1_expression=2.7225304007815,0.348975407639361,1.36499771816861,0.90739263392049,0,0.671517087647559,0.233612640595526,0.774739940649458,1.68946466582,2.57470978954193,0.171217968225505,0.319088635981346,0.513602189793617,0.611942816932982,0.333109761815663,0,0,0.157731082679119,0.274228867211478,0,5.3577272795174,1.68794617041505,2.61199789138935,0.47997726838022,0,0,0.430761996159075,0.215471232685889,0.380046838912748,0.504060259519861,0.443461021310609,0.635030673459631,0,0,0.288851619751275,0.166234645358492,0.408338712524738,4.18531630736908,5.4693474116666,1.0470474879476,8.82347232046521,6.83045484958446,4.36959317728038,1.25896817975577,0.608261587317087,0.183546752161682,3.12956537739216,5.45062890951116,6.37089929929968,6.80504646759992,3.49966054063406,7.18762821824858,0,0.725362142011344,0.336093799142464,2.57259436035947,2.29226751951005,7.21940929188419,4.24864567805155,4.7609188134483,3.1691570175309,4.40497891689872,1.77858959222228,0.449949858640699,2.96659908770092,0.7104801149461,8.38880309451533,16.5213871288268,1.24427534770173,1.75507719831198,0.630974884054146,10.5690864229407,10.8225585066291,1.10241719293459,1.43768206527355,1.83843757322004,16.5173821499083,20.6853487698004,18.8936035905179,2.90149833006426,3.47653045689157,2.08365348222704,15.355064945076,16.8828783009504,17.1134037510027,7.36571463684169,9.681274294339,4.10078780815661,4.24066682665831,4.76100828672749,2.6087803983151,0.860423876981386,1.3599426674155,0,0,0,36.9368824946507,1.87473354835864,1.03914401841148,0.35333957451034,3.23939865486365,0,0,0,0.865964164044856,0.760079596425296,1.51657333504435,5.36664234679582,1.03575153458869,1.48442139064825,2.4287945747259,6.08930956624282,3.45923245884088,3.01445281105245,5.17390311397101,2.13633205260448,1.48316980640624,3.03658649531814,24.7690954545965,32.8386705393241,45.4933528028411,23.2740121504907,1.86391761218122,19.0307518057506,20.5257772677186,0.255457055208591,0.11981512450592,0.599902730993408,0.254140454146129,20.2217363196511,20.1300265240196,2.1361239859187,28.3333641913411,31.1972857943003,20.3632283668369,19.4689515681309,3.56437773476107,11.0722203842983,2.27450482590307,13.4682787767343,2.60240885925407,2.5289231487682,3.24111833649629,5.57607825992146,5.78310242786287,7.17436833595159,6.37171727006156,18.6266426932091,1.5089759505299,1.51284864134255,2.11141348996739,4.3839146485515,3.33656699070717,6.268538997399,2.46938563689532,3.98068533636986,0,0,0,8.49215667395558,11.0227248191115,13.8647787324981,11.8372367792605,16.7249596985293,19.2833891109223,24.8811320882936,23.0715125203672,26.6224980597146,29.127093434686,38.579354058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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=74166 | |||
|HGNC= | |||
|MCL_coexpression_id=311 | |||
|TSSclassifier=NA | |||
|UniProt=Q3TMP8 | |||
|association_with_transcript=0bp_to_ENSMUST00000034244,NM_144534,uc009mgi.2_5end | |||
|cluster_id=chr8:75095968..75096013,+ | |||
|description=CAGE_peak_2_at_Tmem38a_5end | |||
|id=chr8:75095968..75096013,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.99e-12!75;UBERON:0001016!1.99e-12!75;UBERON:0004121!2.41e-12!102;UBERON:0000924!2.41e-12!102;UBERON:0006601!2.41e-12!102;UBERON:0001017!2.60e-12!73;UBERON:0005743!2.60e-12!73;UBERON:0000033!7.36e-12!63;UBERON:0000955!4.89e-11!50;UBERON:0006238!4.89e-11!50;UBERON:0002346!1.34e-10!71;UBERON:0003075!1.34e-10!71;UBERON:0007284!1.34e-10!71;UBERON:0002616!1.37e-10!49;UBERON:0001049!1.67e-10!52;UBERON:0005068!1.67e-10!52;UBERON:0006241!1.67e-10!52;UBERON:0007135!1.67e-10!52;UBERON:0003056!1.07e-08!49;UBERON:0003080!6.43e-08!40;UBERON:0007100!1.29e-07!18;UBERON:0000948!1.29e-07!18;UBERON:0005498!1.29e-07!18;UBERON:0004140!1.29e-07!18;UBERON:0009881!1.29e-07!18;UBERON:0004141!1.29e-07!18;UBERON:0003084!1.29e-07!18;UBERON:0007005!1.29e-07!18;UBERON:0004139!1.29e-07!18;UBERON:0004291!1.29e-07!18;UBERON:0002780!1.64e-07!39;UBERON:0001890!1.64e-07!39;UBERON:0006240!1.64e-07!39;UBERON:0002021!2.83e-07!10;UBERON:0000411!2.83e-07!10;UBERON:0001950!2.83e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,6.87e-18,92;UBERON:0004121,9.51e-13,95;UBERON:0000924,9.51e-13,95;UBERON:0006601,9.51e-13,95;UBERON:0001016,1.65e-12,75;UBERON:0001017,2.16e-12,73;UBERON:0000073,1.49e-11,54;UBERON:0002346,2.50e-11,64;UBERON:0003075,2.50e-11,64;UBERON:0007284,2.50e-11,64;UBERON:0001049,1.49e-10,52;UBERON:0005068,1.49e-10,52;UBERON:0006241,1.49e-10,52;UBERON:0007135,1.49e-10,52;UBERON:0010371,2.93e-10,73;UBERON:0000955,8.26e-10,47;UBERON:0006238,8.26e-10,47;UBERON:0002616,2.26e-09,46;UBERON:0003056,9.99e-09,49;UBERON:0003080,6.22e-08,40;UBERON:0007100,1.05e-07,18;UBERON:0000948,1.05e-07,18;UBERON:0005498,1.05e-07,18;UBERON:0004140,1.05e-07,18;UBERON:0009881,1.05e-07,18;UBERON:0004141,1.05e-07,18;UBERON:0003084,1.05e-07,18;UBERON:0007005,1.05e-07,18;UBERON:0004139,1.05e-07,18;UBERON:0004291,1.05e-07,18;UBERON:0002780,1.60e-07,39;UBERON:0001890,1.60e-07,39;UBERON:0006240,1.60e-07,39;UBERON:0002021,2.31e-07,10;UBERON:0000411,2.31e-07,10;UBERON:0001950,2.31e-07,10 | |||
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| |||
|short_description=p2@Tmem38a | |||
}} |
Latest revision as of 19:04, 25 September 2015
Short description: | p2@Tmem38a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Tmem38a_5end |
Coexpression cluster: | MCL_coexpression_mm9:311 |
Association with transcript: | 0bp_to_ENSMUST00000034244, NM_144534, uc009mgi.2_5end |
EntrezGene: | Tmem38a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data