Personal tools

FFCP PHASE1:Mm9::chr19:4214416..4214432,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(4 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=56708
|EntrezGene=56708
|HGNC=
|HGNC=
|MCL_coexpression_id=92
|TSSclassifier=NA
|UniProt=Q9QZM3,Q3TM06
|UniProt=Q9QZM3,Q3TM06
|association_with_transcript=24bp_to_NM_019952,uc008fzj.1,uc008fzk.1,uc008fzl.1_5end
|association_with_transcript=24bp_to_NM_019952,uc008fzj.1,uc008fzk.1,uc008fzl.1_5end
|cluster_id=chr19:4214416..4214432,+
|description=CAGE_peak_1_at_Clcf1_5end
|description=CAGE_peak_1_at_Clcf1_5end
|id=chr19:4214416..4214432,+
|id=chr19:4214416..4214432,+
|ontology_enrichment_celltype=CL:0000219!4.12e-14!54;CL:0002320!1.34e-09!46;CL:0000134!1.34e-09!46;CL:0000542!2.44e-08!13;CL:0000051!2.44e-08!13;CL:0000838!6.68e-08!12;CL:0000333!1.24e-07!10;CL:0000095!1.24e-07!10;CL:0000243!1.24e-07!10;CL:0000123!1.24e-07!10;CL:0000125!1.24e-07!10;CL:0000030!1.24e-07!10;CL:0000339!1.24e-07!10;CL:0000988!2.34e-07!32;CL:0002032!2.34e-07!32;CL:0000037!2.34e-07!32;CL:0000566!2.34e-07!32;CL:0000837!2.34e-07!32;CL:0000084!2.72e-07!11;CL:0000827!2.72e-07!11;CL:0000738!4.51e-07!17;CL:0002087!4.51e-07!17
|ontology_enrichment_celltype=CL:0000219!4.12e-14!54;CL:0002320!1.34e-09!46;CL:0000134!1.34e-09!46;CL:0000542!2.44e-08!13;CL:0000051!2.44e-08!13;CL:0000838!6.68e-08!12;CL:0000333!1.24e-07!10;CL:0000095!1.24e-07!10;CL:0000243!1.24e-07!10;CL:0000123!1.24e-07!10;CL:0000125!1.24e-07!10;CL:0000030!1.24e-07!10;CL:0000339!1.24e-07!10;CL:0000988!2.34e-07!32;CL:0002032!2.34e-07!32;CL:0000037!2.34e-07!32;CL:0000566!2.34e-07!32;CL:0000837!2.34e-07!32;CL:0000084!2.72e-07!11;CL:0000827!2.72e-07!11;CL:0000738!4.51e-07!17;CL:0002087!4.51e-07!17
|ontology_enrichment_celltype_v019_2=CL:0000219,6.81e-20,54;CL:0002320,8.69e-14,46;CL:0000134,8.69e-14,46;CL:0000542,2.61e-10,13;CL:0000051,2.61e-10,13;CL:0000988,4.22e-10,32;CL:0002032,4.22e-10,32;CL:0000037,4.22e-10,32;CL:0000837,4.22e-10,32;CL:0000838,9.54e-10,12;CL:0000738,1.26e-09,17;CL:0002087,1.26e-09,17;CL:0000333,2.12e-09,10;CL:0000095,2.12e-09,10;CL:0000243,2.12e-09,10;CL:0000123,2.12e-09,10;CL:0000125,2.12e-09,10;CL:0000030,2.12e-09,10;CL:0000339,2.12e-09,10;CL:0002031,2.22e-09,25;CL:0000084,5.80e-09,11;CL:0000827,5.80e-09,11;CL:0000791,5.70e-08,9;CL:0000789,5.70e-08,9;CL:0002420,5.70e-08,9;CL:0002419,5.70e-08,9;CL:0000790,5.70e-08,9;CL:0002453,1.38e-07,8;CL:0000624,3.71e-07,8
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002384!1.34e-09!46;UBERON:0000926!2.06e-07!193;UBERON:0004120!2.06e-07!193;UBERON:0006603!2.06e-07!193
|ontology_enrichment_uberon=UBERON:0002384!1.34e-09!46;UBERON:0000926!2.06e-07!193;UBERON:0004120!2.06e-07!193;UBERON:0006603!2.06e-07!193
|ontology_enrichment_uberon_v019_2=UBERON:0002384,8.69e-14,46
|phase1_expression=0.80074423552397,0,0,0,0,0,0,4.77756296733832,141.07029959597,155.418845477804,22.6007718057667,32.0684079161252,3.42401459862411,3.84649770643589,1.99865857089398,1.41732687172878,2.09868563438444,5.8360500591274,6.03303507865251,7.63901373236454,1.44573593256819,2.48227378002213,6.00759515019551,1.11994695955385,1.83527424853736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485510353031154,3.52511090331616,5.47435428585379,6.42413632565885,6.25913075478431,20.7123898561424,51.8459391253353,39.2748396130052,7.97922603264566,30.188038516644,19.7983475148129,11.6057942721815,23.19047214083,1.80081605225163,1.71920063963254,1.54701627683233,0,0,0,5.42151251310611,5.33576877666684,6.74924787961049,9.88866362566974,9.2362414942993,12.583204641773,10.7581125490035,0,0,0,0,0.220868540951614,0.367472397644862,0,0,0,0,0,0,0,0,0.279182999001381,0,0.30559649555362,0,0,0,431.942206772482,167.542148756744,9.56552812715537,0,3.39985666853875,0.539703191637817,0,0,0.421333260395256,12.4414135481982,17.1458763037893,19.0803370235584,0.563373679106722,2.56652954828636,12.7402619853323,35.5533351576666,23.3810324292111,22.0423082963336,30.8369911459018,0.45673551887624,4.66088190564909,1.03909497345377,0.520455980298408,1.21786191324856,0.461230994512117,0.753613202763113,1.17588707135705,0.502666365318702,0.741584903203122,0,0,0.647067399789637,1.10420759230197,0.484875253135222,0,0.292780797011547,0.628340120440365,0.766371165625774,7.0690923458493,2.39961092397363,3.04968544975355,0.149790639404823,0,0.125654352112864,0,0,0,0.162241263067758,3.97173519016234,1.11966273549084,0,0,0.390361328888111,1.14951052216736,1.80062129805349,0.452114453507145,1.42876648217788,0.896796041993948,0.843315521037559,0.776110112217047,1.07783996466421,3.78212160335639,3.51902248327898,2.19195732427575,3.05851974148158,2.43776516565517,2.67516777330327,3.38358253591438,0.702213187313235,1.02939162845886,0.568326998791185,0.207125772535502,0,0,0.23674473558521,0.196764231747404,0.462801338662135,0,0.268273401399619,0.233530684734339,0.329119699826961,0.492502392237286,0.486412857275134,0.292399974850665,0.439100230582101,0.268412837520744,0,0.102904612379284,0,0,5.33220626338085,2.55460339046482,1.03093969057675,0.403367049246685,1.33426826306922,0.760902504450237,0.474529061544512,0.988193728344065,1.50801125280162,1.39269530428806,0.779856348476481,0.898819408654221,0.432276099749388,0,1.13800740571849,1.14248512609729,1.1270773567308,0.610953983535943,1.16371492300575,1.54298803758701,1.13825766823663,0.442830443938806,0,0.370191491765402,0.296452627087149,0.166845105716094,0.196558995113203,0.224862112384854,0,0.72353147925725,0.25462585178142,0.287696137450811,0.810676133875177,0.549122826376163,0,0,0.312037673114561,0,0,0.964887042726734,1.47802552133284,0.568474235311454,0.325929952884052,0.509235257325564,0.938760993154008,0.837531287209079,0.714130922658041,2.14647012643579,1.26108115284953,1.7717175171902,2.07291199254733,1.3109065177259,1.72684981865896,0.867894351489069,0,0,0,0.827810238914197,0,0,8.52461715958712,0.757412781613119,0,0,0,0.477937595905104,2.22798674082394,2.26461224631066,0,0,0,1.28528526568723,2.41298144854057,4.45164009168138,7.00413925220377,3.29940245945071,0,2.42780636154981,1.51161778482376,1.50884063804718,2.06711325016541,1.22974059177571,2.32585463851399,1.09060118843252,1.06949213515416,1.26414703174326,0,1.03135543248187,0.340439605753788,0.720244376125241,0.517434735131018,0.428674070063185,0.354680467284547,0.891844088010353,1.48094118541909,0.304464949114599,1.40803024838226,1.90648863777438,0,0.65954501176592,0.322928853391811,0.603129249281559,0.596861720015682,0.492422699235184,1.7488850197791,0.556275906031529,2.05045056957423,2.06386867963222,1.11116716421827,1.69531611304222,1.23024804948923,1.14389086603261,13.0883391095269,10.636310376598,11.746997773376,1.90934123603023,2.21435195506795,1.82987520414164,1.08005340821801,1.46361807210128,0.436725127492355,1.07891477107857,0.826534557253359,0.785267825952089,0.777689839750757,1.86401793926078,0,0.897099276263873,0.66183396182839,1.36115831840833,1.03327858782185,0.675824501963113,1.40828686374905,1.95306577265925,0.838874755405687,0.241584120826006,0,0,0.608175645870493,1.02710957164827,0.649604114888975,0.179026695667481,0.79472541912506,0.600977247599844,0.443068581523732,0.403865799792591,0.228620419965,0.201652370273681,0.292373642219257,0.192423683280659,0.467507608726276,0,0,0.448569283047378,0.503653849092235,0.965947970160952,3.94133198447482,3.6630324853453,2.35805216986972,0.501572104035363,0,0.460325236507177,0,0.171853182343688,0,0,0,0,0.453142408984205,0,0.31136204275253,1.59609949360412,1.19513524027894,0.486213434136588,0.419226325255965,0.367687016900028,0.44449345560323,1.03017528619447,0.320919209591815,1.26348605881899,1.01391719956096,0.565879024158229,0.561849044819294,0.89635213366817,0.861532034334199,0,0.695305955669133,0.578727661391115,0,0.588795680537589,0,0.354951612318675,0.476872379894642,0.436039249896986,0.470546902076653,0.676916863133412,0.365855945745545,0.263069711437843,0.271608227691724,0,1.18635018124174,0.591026894253381,0.818462086339379,0.929621047115796,1.35034627686799,0.999242311751784,0.467863216890817,0.859484216193193,0.57386499620653,0.661774257358546,0.231867835620421
|phase1_expression=0.80074423552397,0,0,0,0,0,0,4.77756296733832,141.07029959597,155.418845477804,22.6007718057667,32.0684079161252,3.42401459862411,3.84649770643589,1.99865857089398,1.41732687172878,2.09868563438444,5.8360500591274,6.03303507865251,7.63901373236454,1.44573593256819,2.48227378002213,6.00759515019551,1.11994695955385,1.83527424853736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485510353031154,3.52511090331616,5.47435428585379,6.42413632565885,6.25913075478431,20.7123898561424,51.8459391253353,39.2748396130052,7.97922603264566,30.188038516644,19.7983475148129,11.6057942721815,23.19047214083,1.80081605225163,1.71920063963254,1.54701627683233,0,0,0,5.42151251310611,5.33576877666684,6.74924787961049,9.88866362566974,9.2362414942993,12.583204641773,10.7581125490035,0,0,0,0,0.220868540951614,0.367472397644862,0,0,0,0,0,0,0,0,0.279182999001381,0,0.30559649555362,0,0,0,431.942206772482,167.542148756744,9.56552812715537,0,3.39985666853875,0.539703191637817,0,0,0.421333260395256,12.4414135481982,17.1458763037893,19.0803370235584,0.563373679106722,2.56652954828636,12.7402619853323,35.5533351576666,23.3810324292111,22.0423082963336,30.8369911459018,0.45673551887624,4.66088190564909,1.03909497345377,0.520455980298408,1.21786191324856,0.461230994512117,0.753613202763113,1.17588707135705,0.502666365318702,0.741584903203122,0,0,0.647067399789637,1.10420759230197,0.484875253135222,0,0.292780797011547,0.628340120440365,0.766371165625774,7.0690923458493,2.39961092397363,3.04968544975355,0.149790639404823,0,0.125654352112864,0,0,0,0.162241263067758,3.97173519016234,1.11966273549084,0,0,0.390361328888111,1.14951052216736,1.80062129805349,0.452114453507145,1.42876648217788,0.896796041993948,0.843315521037559,0.776110112217047,1.07783996466421,3.78212160335639,3.51902248327898,2.19195732427575,3.05851974148158,2.43776516565517,2.67516777330327,3.38358253591438,0.702213187313235,1.02939162845886,0.568326998791185,0.207125772535502,0,0,0.23674473558521,0.196764231747404,0.462801338662135,0,0.268273401399619,0.233530684734339,0.329119699826961,0.492502392237286,0.486412857275134,0.292399974850665,0.439100230582101,0.268412837520744,0,0.102904612379284,0,0,5.33220626338085,2.55460339046482,1.03093969057675,0.403367049246685,1.33426826306922,0.760902504450237,0.474529061544512,0.988193728344065,1.50801125280162,1.39269530428806,0.779856348476481,0.898819408654221,0.432276099749388,0,1.13800740571849,1.14248512609729,1.1270773567308,0.610953983535943,1.16371492300575,1.54298803758701,1.13825766823663,0.442830443938806,0,0.370191491765402,0.296452627087149,0.166845105716094,0.196558995113203,0.224862112384854,0,0.72353147925725,0.25462585178142,0.287696137450811,0.810676133875177,0.549122826376163,0,0,0.312037673114561,0,0,0.964887042726734,1.47802552133284,0.568474235311454,0.325929952884052,0.509235257325564,0.938760993154008,0.837531287209079,0.714130922658041,2.14647012643579,1.26108115284953,1.7717175171902,2.07291199254733,1.3109065177259,1.72684981865896,0.867894351489069,0,0,0,0.827810238914197,0,0,8.52461715958712,0.757412781613119,0,0,0,0.477937595905104,2.22798674082394,2.26461224631066,0,0,0,1.28528526568723,2.41298144854057,4.45164009168138,7.00413925220377,3.29940245945071,0,2.42780636154981,1.51161778482376,1.50884063804718,2.06711325016541,1.22974059177571,2.32585463851399,1.09060118843252,1.06949213515416,1.26414703174326,0,1.03135543248187,0.340439605753788,0.720244376125241,0.517434735131018,0.428674070063185,0.354680467284547,0.891844088010353,1.48094118541909,0.304464949114599,1.40803024838226,1.90648863777438,0,0.65954501176592,0.322928853391811,0.603129249281559,0.596861720015682,0.492422699235184,1.7488850197791,0.556275906031529,2.05045056957423,2.06386867963222,1.11116716421827,1.69531611304222,1.23024804948923,1.14389086603261,13.0883391095269,10.636310376598,11.746997773376,1.90934123603023,2.21435195506795,1.82987520414164,1.08005340821801,1.46361807210128,0.436725127492355,1.07891477107857,0.826534557253359,0.785267825952089,0.777689839750757,1.86401793926078,0,0.897099276263873,0.66183396182839,1.36115831840833,1.03327858782185,0.675824501963113,1.40828686374905,1.95306577265925,0.838874755405687,0.241584120826006,0,0,0.608175645870493,1.02710957164827,0.649604114888975,0.179026695667481,0.79472541912506,0.600977247599844,0.443068581523732,0.403865799792591,0.228620419965,0.201652370273681,0.292373642219257,0.192423683280659,0.467507608726276,0,0,0.448569283047378,0.503653849092235,0.965947970160952,3.94133198447482,3.6630324853453,2.35805216986972,0.501572104035363,0,0.460325236507177,0,0.171853182343688,0,0,0,0,0.453142408984205,0,0.31136204275253,1.59609949360412,1.19513524027894,0.486213434136588,0.419226325255965,0.367687016900028,0.44449345560323,1.03017528619447,0.320919209591815,1.26348605881899,1.01391719956096,0.565879024158229,0.561849044819294,0.89635213366817,0.861532034334199,0,0.695305955669133,0.578727661391115,0,0.588795680537589,0,0.354951612318675,0.476872379894642,0.436039249896986,0.470546902076653,0.676916863133412,0.365855945745545,0.263069711437843,0.271608227691724,0,1.18635018124174,0.591026894253381,0.818462086339379,0.929621047115796,1.35034627686799,0.999242311751784,0.467863216890817,0.859484216193193,0.57386499620653,0.661774257358546,0.231867835620421
|short_description=p1@Clcf1
|short_description=p1@Clcf1
}}
}}

Latest revision as of 19:04, 25 September 2015

Short description:p1@Clcf1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Clcf1_5end
Coexpression cluster:MCL_coexpression_mm9:92
Association with transcript: 24bp_to_NM_019952, uc008fzj.1, uc008fzk.1, uc008fzl.1_5end
EntrezGene:Clcf1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Clcf1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.80
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E94.78
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E7141.07
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F2155.42
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E622.60
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F132.07
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E43.42
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E83.85
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.42
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.10
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A25.84
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A46.03
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A67.64
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.45
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H22.48
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I96.01
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.12
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.84
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D83.53
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D95.47
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B36.42
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B76.26
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C220.71
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B851.85
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C339.27
Mouse Astrocytes, donor2.CNhs12078.11552-120C47.98
Mouse Astrocytes, donor3.CNhs12107.11633-122C430.19
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A219.80
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I911.61
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A123.19
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.80
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.72
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.55
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C65.42
Mouse Meningeal cells, donor3.CNhs12109.11639-122D15.34
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C76.75
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E79.89
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D29.24
Mouse Microglia, donor1.CNhs12629.11718-123C812.58
Mouse Microglia, donor2.CNhs12634.11736-123E810.76
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.37
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.31
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D9431.94
Mouse Schwann, donor2.CNhs12573.11746-123F9167.54
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G39.57
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C43.40
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I712.44
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E317.15
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I819.08
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.56
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I812.74
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B635.55
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G123.38
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G222.04
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G330.84
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.46
accessory axillary lymph node, adult.CNhs10475.1063-29H94.66
adrenal gland, adult.CNhs10508.49-24D71.04
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D61.22
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.75
adrenal gland, neonate N00.CNhs11191.1311-23C11.18
adrenal gland, neonate N25.CNhs11223.1377-27I30.50
amnion, adult pregnant day17.5.CNhs10488.583-22A80.74
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.65
bone (os femoris), neonate N16.CNhs11225.1525-43A61.10
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.63
colon, adult.CNhs10468.36-18H70.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C77.07
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D12.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D43.05
corpora quadrigemina, adult.CNhs10501.16-22A40.15
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.16
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.97
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E21.15
eyeball, embryo E15.CNhs10593.426-16C91.80
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C61.43
eyeball, neonate N01.CNhs11140.1532-43E70.90
eyeball, neonate N02.CNhs11205.1551-44G80.84
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E21.08
forelimb, embryo E12.CNhs10600.359-14H23.78
forelimb, embryo E13.CNhs10589.384-1E23.52
forelimb, embryo E14.CNhs10577.413-26A82.19
forelimb, embryo E15.CNhs11007.437-20E73.06
forelimb, embryo E17.CNhs10598.1517-43C42.44
forelimb, embryo E18.CNhs11008.1520-43B52.68
gonad, embryo E13.CNhs11044.1564-45I63.38
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.03
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.57
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.49
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.10
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I55.33
intestine, embryo E13.CNhs11010.381-16D52.55
intestine, embryo E15.CNhs10602.976-16D81.03
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D31.33
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.99
intestine, neonate N06.CNhs11102.688-20B81.51
intestine, neonate N07.CNhs11095.720-20F21.39
intestine, neonate N10.CNhs11098.755-23A50.78
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I91.14
kidney, embryo E15.CNhs10997.434-16F81.14
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C71.16
kidney, neonate N00.CNhs11214.646-21G71.54
kidney, neonate N10.CNhs11206.758-6D51.14
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.37
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.72
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.81
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B11.48
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B60.94
lung, embryo E17.CNhs10605.480-44A60.84
lung, embryo E18.CNhs10583.1287-20I60.71
lung, neonate N00.CNhs11224.640-42C62.15
lung, neonate N06.CNhs11212.683-20E51.26
lung, neonate N07.CNhs11111.715-19A31.77
lung, neonate N10.CNhs11219.750-23E62.07
lung, neonate N20.CNhs11109.822-18A41.31
lung, neonate N25.CNhs11119.1359-25C71.73
lung, neonate N30.CNhs11133.1394-42H20.87
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C78.52
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.23
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.26
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I91.29
ovary, adult.CNhs10507.91-2I72.41
ovary, embryo E18.CNhs11040.505-44H74.45
ovary, neonate N00.CNhs11217.1299-22I47.00
oviduct, adult pregnant day01.CNhs10500.988-6G63.30
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F42.43
pancreas, embryo E15.CNhs11042.1556-45F21.51
pancreas, embryo E16.CNhs11003.460-26E51.51
pancreas, embryo E17.CNhs10599.1558-45G32.07
pancreas, embryo E18.CNhs10580.1535-43I71.23
pancreas, neonate N00.CNhs11105.645-26G92.33
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B61.26
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.72
pituitary gland, embryo E13.CNhs11009.370-44C70.52
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.89
pituitary gland, embryo E17.CNhs11039.1265-44F51.48
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I71.41
placenta, adult pregnant day17.CNhs10464.577-18G31.91
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.66
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.60
skin, neonate N06.CNhs11097.693-20I50.60
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I11.75
spinal cord, adult.CNhs10505.24-13C90.56
spleen, adult.CNhs10465.25-2G22.05
spleen, embryo E16.CNhs11035.461-43C12.06
spleen, embryo E18.CNhs11011.1271-21F21.11
spleen, neonate N10.CNhs11116.752-24D11.70
spleen, neonate N20.CNhs11112.824-19H11.23
spleen, neonate N25.CNhs11099.1354-25G31.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C613.09
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C910.64
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D311.75
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E32.21
stomach, embryo E15.CNhs10603.1252-16G81.83
stomach, embryo E16.CNhs11022.459-17D41.08
stomach, embryo E17.CNhs11006.1035-18D51.46
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B81.08
stomach, neonate N07.CNhs11210.718-18A90.83
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I10.78
submandibular gland, adult.CNhs10469.59-29C11.86
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.90
testis, embryo E15.CNhs11034.443-27C50.66
testis, embryo E16.CNhs11033.470-26G51.36
testis, embryo E17.CNhs11029.486-18I51.03
testis, embryo E18.CNhs11027.503-18G50.68
testis, neonate N00.CNhs11189.1300-22B71.41
testis, neonate N07.CNhs11222.726-26I41.95
testis, neonate N10.CNhs11204.763-44D90.84
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I21.03
thymus, embryo E16.CNhs11002.456-26C50.65
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.79
thymus, neonate N02.CNhs11181.1541-43F80.60
thymus, neonate N03.CNhs11137.2104-43C70.44
thymus, neonate N06.CNhs11197.681-26C40.40
thymus, neonate N07.CNhs11211.713-19D30.23
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.29
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.47
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.45
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.50
urinary bladder, adult.CNhs10481.879-12E40.97
uterus, adult pregnant day19.CNhs10497.590-15F53.94
uterus, adult.CNhs10509.92-27E53.66
vagina, adult.CNhs10502.89-27D52.36
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H21.20
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.90
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.86
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.93
whole body, embryo E17.5.CNhs10513.490-9F91.35
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
motile cell6.81e-2054
connective tissue cell8.69e-1446
mesenchymal cell8.69e-1446
lymphocyte2.61e-1013
common lymphoid progenitor2.61e-1013
hematopoietic cell4.22e-1032
hematopoietic oligopotent progenitor cell4.22e-1032
hematopoietic stem cell4.22e-1032
hematopoietic multipotent progenitor cell4.22e-1032
lymphoid lineage restricted progenitor cell9.54e-1012
leukocyte1.26e-0917
nongranular leukocyte1.26e-0917
migratory neural crest cell2.12e-0910
neuron associated cell2.12e-0910
glial cell (sensu Vertebrata)2.12e-0910
neuron associated cell (sensu Vertebrata)2.12e-0910
glial cell2.12e-0910
glioblast2.12e-0910
glioblast (sensu Vertebrata)2.12e-0910
hematopoietic lineage restricted progenitor cell2.22e-0925
T cell5.80e-0911
pro-T cell5.80e-0911
mature alpha-beta T cell5.70e-089
alpha-beta T cell5.70e-089
immature T cell5.70e-089
mature T cell5.70e-089
immature alpha-beta T cell5.70e-089
oligodendrocyte precursor cell1.38e-078
CD4-positive, alpha-beta T cell3.71e-078

Uber anatomy
Ontology termp-valuen
connective tissue8.69e-1446
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr19:4214416..4214432,%2B&oldid=4208541"