FFCP PHASE1:Mm9::chr10:127935703..127935731,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=216459 | |EntrezGene=216459 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q8CI43 | |UniProt=Q8CI43 | ||
|association_with_transcript=9bp_to_ENSMUST00000026428,NM_172259,uc007hne.1_5end | |association_with_transcript=9bp_to_ENSMUST00000026428,NM_172259,uc007hne.1_5end | ||
|cluster_id=chr10:127935703..127935731,- | |||
|description=CAGE_peak_1_at_Myl6b_5end | |description=CAGE_peak_1_at_Myl6b_5end | ||
|id=chr10:127935703..127935731,- | |id=chr10:127935703..127935731,- | ||
|ontology_enrichment_celltype=CL:0002319!7.89e-20!43;CL:0000221!1.39e-19!44;CL:0000133!1.39e-19!44;CL:0000540!4.91e-18!33;CL:0000047!4.91e-18!33;CL:0000031!4.91e-18!33;CL:0000404!4.91e-18!33;CL:0000055!4.53e-17!50;CL:0000393!1.10e-15!39;CL:0000211!1.10e-15!39;CL:0000117!1.58e-14!23;CL:0000337!1.58e-14!23 | |ontology_enrichment_celltype=CL:0002319!7.89e-20!43;CL:0000221!1.39e-19!44;CL:0000133!1.39e-19!44;CL:0000540!4.91e-18!33;CL:0000047!4.91e-18!33;CL:0000031!4.91e-18!33;CL:0000404!4.91e-18!33;CL:0000055!4.53e-17!50;CL:0000393!1.10e-15!39;CL:0000211!1.10e-15!39;CL:0000117!1.58e-14!23;CL:0000337!1.58e-14!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0002319,5.59e-20,43;CL:0000221,9.85e-20,44;CL:0000133,9.85e-20,44;CL:0000540,2.13e-18,33;CL:0000047,2.13e-18,33;CL:0000031,2.13e-18,33;CL:0000404,2.13e-18,33;CL:0000393,2.09e-16,39;CL:0000211,2.09e-16,39;CL:0000117,8.18e-15,23;CL:0000337,8.18e-15,23;CL:0002321,4.37e-07,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.90e-32!73;UBERON:0005743!1.90e-32!73;UBERON:0000073!1.32e-31!75;UBERON:0001016!1.32e-31!75;UBERON:0004121!1.43e-25!102;UBERON:0000924!1.43e-25!102;UBERON:0006601!1.43e-25!102;UBERON:0001049!4.91e-22!52;UBERON:0005068!4.91e-22!52;UBERON:0006241!4.91e-22!52;UBERON:0007135!4.91e-22!52;UBERON:0002346!4.59e-21!71;UBERON:0003075!4.59e-21!71;UBERON:0007284!4.59e-21!71;UBERON:0000955!2.46e-20!50;UBERON:0006238!2.46e-20!50;UBERON:0002616!4.83e-20!49;UBERON:0000033!2.58e-18!63;UBERON:0002020!1.22e-17!34;UBERON:0003080!1.58e-16!40;UBERON:0003056!3.62e-16!49;UBERON:0002780!7.95e-16!39;UBERON:0001890!7.95e-16!39;UBERON:0006240!7.95e-16!39;UBERON:0002791!1.06e-14!29;UBERON:0003528!1.06e-14!29;UBERON:0001893!1.06e-14!29;UBERON:0000153!4.63e-10!94;UBERON:0000956!5.90e-10!21;UBERON:0001869!5.90e-10!21;UBERON:0000203!5.90e-10!21;UBERON:0007811!8.24e-10!86;UBERON:0002619!8.15e-08!17 | |ontology_enrichment_uberon=UBERON:0001017!1.90e-32!73;UBERON:0005743!1.90e-32!73;UBERON:0000073!1.32e-31!75;UBERON:0001016!1.32e-31!75;UBERON:0004121!1.43e-25!102;UBERON:0000924!1.43e-25!102;UBERON:0006601!1.43e-25!102;UBERON:0001049!4.91e-22!52;UBERON:0005068!4.91e-22!52;UBERON:0006241!4.91e-22!52;UBERON:0007135!4.91e-22!52;UBERON:0002346!4.59e-21!71;UBERON:0003075!4.59e-21!71;UBERON:0007284!4.59e-21!71;UBERON:0000955!2.46e-20!50;UBERON:0006238!2.46e-20!50;UBERON:0002616!4.83e-20!49;UBERON:0000033!2.58e-18!63;UBERON:0002020!1.22e-17!34;UBERON:0003080!1.58e-16!40;UBERON:0003056!3.62e-16!49;UBERON:0002780!7.95e-16!39;UBERON:0001890!7.95e-16!39;UBERON:0006240!7.95e-16!39;UBERON:0002791!1.06e-14!29;UBERON:0003528!1.06e-14!29;UBERON:0001893!1.06e-14!29;UBERON:0000153!4.63e-10!94;UBERON:0000956!5.90e-10!21;UBERON:0001869!5.90e-10!21;UBERON:0000203!5.90e-10!21;UBERON:0007811!8.24e-10!86;UBERON:0002619!8.15e-08!17 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.94e-33,73;UBERON:0001016,5.16e-32,75;UBERON:0004121,9.43e-27,95;UBERON:0000924,9.43e-27,95;UBERON:0006601,9.43e-27,95;UBERON:0002346,7.25e-24,64;UBERON:0003075,7.25e-24,64;UBERON:0007284,7.25e-24,64;UBERON:0000073,1.28e-23,54;UBERON:0001049,1.73e-22,52;UBERON:0005068,1.73e-22,52;UBERON:0006241,1.73e-22,52;UBERON:0007135,1.73e-22,52;UBERON:0010371,9.75e-21,73;UBERON:0000955,6.08e-19,47;UBERON:0006238,6.08e-19,47;UBERON:0002616,1.19e-18,46;UBERON:0002020,5.40e-18,34;UBERON:0003080,7.37e-17,40;UBERON:0003056,1.73e-16,49;UBERON:0002780,3.85e-16,39;UBERON:0001890,3.85e-16,39;UBERON:0006240,3.85e-16,39;UBERON:0003528,5.45e-15,29;UBERON:0002791,5.45e-15,29;UBERON:0001893,5.45e-15,29;UBERON:0010314,4.23e-12,92;UBERON:0000956,3.85e-10,21;UBERON:0001869,3.85e-10,21;UBERON:0000203,3.85e-10,21;UBERON:0002619,5.93e-08,17 | |||
|phase1_expression=2.24208385946712,0,0,0,0,0.33575854382378,0.233612640595526,0,0,0,0,0,0,0,1.33243904726265,1.41732687172878,0.699561878128147,0.315462165358238,0.411343300817216,0,6.97354979238772,7.4468213400664,4.70159620450084,0.799962113967033,0.68822784320151,0,0,0.215471232685889,0.380046838912748,0.252030129759931,0,0.635030673459631,2.46025915033828,0,0.288851619751275,0.831173226792462,0.204169356262369,0.418531630736908,1.5626706890476,1.0470474879476,0.588231488031014,0.683045484958446,1.94204141212461,7.67970589651021,7.09638518536602,9.36088436024576,1.56478268869608,30.3054967368821,17.3552084360233,15.1655321277941,6.99932108126813,4.31257693094915,0,0,0,1.28629718017973,0,0,17.601532094785,16.9277113367051,12.6766280701236,4.06613438482959,2.66788438833342,2.6996991518442,1.97773272513395,3.5524005747305,8.38880309451533,24.974189845901,13.5833392124106,16.605730414798,16.1950220240564,15.996455126613,11.9269012113871,17.3936934885235,18.0189485514284,15.6267193723704,9.91042928994498,14.939418555967,19.5080297235429,21.2336923245612,28.4526571603494,19.7947080811569,18.1468949350898,12.380777420697,13.9046405476897,14.142172102736,16.657486653495,20.8767379324337,0.832988126665025,3.92972112555285,0.869593466105033,0.860423876981386,0,0,0.649776417447669,0,3.7919993435573,4.09032774187339,1.81850203222008,3.18005617059306,2.67602497575693,2.56652954828636,0,0,1.94841936910093,3.54703811665138,2.52762222507392,2.39786147410026,1.8125651855302,2.52351636410202,2.94925055502431,2.74018930480927,1.38369298353635,1.20578112442098,1.99900802130698,1.75933227861546,0.741584903203122,4.19338135067744,0,1.7794353494215,1.32504911076236,1.45462575940567,1.86391761218122,6.44117753425404,3.35114730901528,0.510914110417183,2.27648736561249,5.39912457894067,1.52484272487678,31.1564529962031,11.8950156732843,19.476424577494,14.2535942557667,7.41574826257959,28.2591740601002,12.4925772562173,1.32391173005411,1.36847667671102,0.252722758433675,2.10441855886474,6.24578126220978,3.90833577536904,6.30217454318722,4.21973489940002,3.19771546011241,2.17793324484245,2.81105173679186,3.10444044886819,5.82033580918674,5.29497024469894,5.45448484908241,5.91828477554452,1.39023624612799,2.43776516565517,1.64625709126355,1.39323986772945,2.80885274925294,3.08817488537658,2.27330799516474,3.93538967817454,2.34526059981096,2.16074473753218,2.84093682702252,1.57411385397923,0.771335564436891,0.930135779001631,1.07309360559848,0.233530684734339,0.16455984991348,0.492502392237286,0.324275238183423,0.146199987425332,0.878200461164203,1.34206418760372,9.88362758251398,15.4356918568927,0.330418782983798,0.793351699990633,2.13288250535234,0.696710015581316,1.28867461322093,1.61346819698674,1.11189021922435,1.52180500890047,0,0.658795818896044,1.00534083520108,0.397912944082302,0.19496408711912,0,0.432276099749388,0.597423819763102,6.06937283049861,2.28497025219458,5.63538678365402,4.68398054044223,2.71533482034676,1.75339549725796,1.39120381673366,0.590440591918409,2.511979645462,4.31890073726302,0.592905254174298,2.00214126859313,2.16214894624523,2.24862112384854,1.42002084971952,1.4470629585145,0.763877555344259,0.287696137450811,0.162135226775035,0.274561413188081,1.43768206527355,0.372140947668503,0.624075346229121,0,0.358794827043824,0.964887042726734,0.554259570499814,2.4633883530163,3.09633455239849,2.20668611507745,3.05097322775053,3.35012514883632,2.14239276797412,0.780534591431195,1.10344600874334,1.99318220683897,0.797273843287435,0.327726629431476,0.690739927463582,0.144649058581512,0,0,0.983528546038072,0.827810238914197,31.628466227595,19.6915633474901,2.29508923527346,2.7771801992481,9.78075480190396,12.4940398174924,12.4945570685023,8.12493913038677,7.5751549188014,5.94460714656548,18.6212922770451,9.35218745316198,9.48690667071656,6.10510501201433,0.99358059645788,2.84904965867608,1.79175655288934,1.48473110675282,1.32745138339963,1.45668381692989,1.209294227859,2.45186603682668,2.95301892880773,2.45948118355142,0.516856586336442,1.81766864738753,0,0.948110273807448,0,2.06271086496374,3.74483566329167,3.24109969256358,7.89087971074802,4.92975180572662,6.56158864476412,2.67553226403106,2.46823530903181,3.34911444026059,0.938686832254841,1.69465656691056,0.441056796109924,4.78170133530292,0.807322133479528,2.53314284698255,3.70054266409723,3.44695889464629,0.291480836629851,22.9927374493032,1.02522528478712,2.06386867963222,0.555583582109135,0.565105371014073,1.36694227721025,0.457556346413045,1.69978429993855,1.95932033253121,2.48759952847963,3.81868247206045,2.68885594543965,1.42323626988794,0.756037385752609,1.46361807210128,2.18362563746178,1.34864346384821,0.495920734352016,0.26175594198403,0.388844919875379,0.621339313086926,9.01908701894705,3.28936401296753,1.98550188548517,4.66682852025714,4.26227417476513,3.37912250981556,2.22978753426933,4.03633593016245,6.92071673209692,7.00593950395418,5.76060012515731,2.21207784439725,3.44632865993279,4.21114924375792,2.20865399062252,4.29664069601955,3.37758303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| ||
|short_description=p1@Myl6b | |short_description=p1@Myl6b | ||
}} | }} |
Latest revision as of 19:03, 25 September 2015
Short description: | p1@Myl6b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Myl6b_5end |
Coexpression cluster: | NA |
Association with transcript: | 9bp_to_ENSMUST00000026428, NM_172259, uc007hne.1_5end |
EntrezGene: | Myl6b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 5.59e-20 | 43 |
ectodermal cell | 9.85e-20 | 44 |
neurectodermal cell | 9.85e-20 | 44 |
neuron | 2.13e-18 | 33 |
neuronal stem cell | 2.13e-18 | 33 |
neuroblast | 2.13e-18 | 33 |
electrically signaling cell | 2.13e-18 | 33 |
electrically responsive cell | 2.09e-16 | 39 |
electrically active cell | 2.09e-16 | 39 |
CNS neuron (sensu Vertebrata) | 8.18e-15 | 23 |
neuroblast (sensu Vertebrata) | 8.18e-15 | 23 |
embryonic cell | 4.37e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 3.94e-33 | 73 |
nervous system | 5.16e-32 | 75 |
ectoderm-derived structure | 9.43e-27 | 95 |
ectoderm | 9.43e-27 | 95 |
presumptive ectoderm | 9.43e-27 | 95 |
neurectoderm | 7.25e-24 | 64 |
neural plate | 7.25e-24 | 64 |
presumptive neural plate | 7.25e-24 | 64 |
regional part of nervous system | 1.28e-23 | 54 |
neural tube | 1.73e-22 | 52 |
neural rod | 1.73e-22 | 52 |
future spinal cord | 1.73e-22 | 52 |
neural keel | 1.73e-22 | 52 |
ecto-epithelium | 9.75e-21 | 73 |
brain | 6.08e-19 | 47 |
future brain | 6.08e-19 | 47 |
regional part of brain | 1.19e-18 | 46 |
gray matter | 5.40e-18 | 34 |
anterior neural tube | 7.37e-17 | 40 |
pre-chordal neural plate | 1.73e-16 | 49 |
regional part of forebrain | 3.85e-16 | 39 |
forebrain | 3.85e-16 | 39 |
future forebrain | 3.85e-16 | 39 |
brain grey matter | 5.45e-15 | 29 |
regional part of telencephalon | 5.45e-15 | 29 |
telencephalon | 5.45e-15 | 29 |
structure with developmental contribution from neural crest | 4.23e-12 | 92 |
cerebral cortex | 3.85e-10 | 21 |
cerebral hemisphere | 3.85e-10 | 21 |
pallium | 3.85e-10 | 21 |
regional part of cerebral cortex | 5.93e-08 | 17 |